RNA–Protein interactions for RNA: ENST00000613691.1

LINC01549-202, Transcript of long intergenic non-protein coding RNA 1549, humanhuman

TSL 5

Gene LINC01549, Length 219 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549-202ENST00000613691 CDK11AQ9UQ88 783 aaPredicted RBP2.3□□□□□ -2.04
LINC01549-202ENST00000613691 TSC22D4Q9Y3Q8 395 aa2.3□□□□□ -2.04
LINC01549-202ENST00000613691 TBX22Q9Y458 520 aa2.3□□□□□ -2.04
LINC01549-202ENST00000613691 PCDHB4Q9Y5E5 795 aa2.3□□□□□ -2.04
LINC01549-202ENST00000613691 PCDHA2Q9Y5H9 948 aa2.3□□□□□ -2.04
LINC01549-202ENST00000613691 NPEPPSL1A6NEC2 478 aa2.29□□□□□ -2.04
LINC01549-202ENST00000613691 CCDC85CA6NKD9 419 aa2.29□□□□□ -2.04
LINC01549-202ENST00000613691 SMAD7O15105 426 aaKnown RBP2.29□□□□□ -2.04
LINC01549-202ENST00000613691 KLF4O43474 513 aa2.29□□□□□ -2.04
LINC01549-202ENST00000613691 SUSD5O60279 629 aa2.29□□□□□ -2.04
LINC01549-202ENST00000613691 FSHBP01225 129 aa2.29□□□□□ -2.04
LINC01549-202ENST00000613691 LRG1P02750 347 aa2.29□□□□□ -2.04
LINC01549-202ENST00000613691 SSBP05455 408 aaKnown RBP eCLIP2.29□□□□□ -2.04
LINC01549-202ENST00000613691 LCP1P13796 627 aa2.29□□□□□ -2.04
LINC01549-202ENST00000613691 LTBRP36941 435 aa2.29□□□□□ -2.04
LINC01549-202ENST00000613691 EPHB4P54760 987 aa2.29□□□□□ -2.04
LINC01549-202ENST00000613691 MLLT6P55198 1093 aaPredicted RBP2.29□□□□□ -2.04
LINC01549-202ENST00000613691 GFRA1P56159 465 aa2.29□□□□□ -2.04
LINC01549-202ENST00000613691 PPP2CBP62714 309 aa2.29□□□□□ -2.04
LINC01549-202ENST00000613691 PPP2CAP67775 309 aa2.29□□□□□ -2.04
LINC01549-202ENST00000613691 LSAMPQ13449 338 aa2.29□□□□□ -2.04
LINC01549-202ENST00000613691 SERINC3Q13530 473 aa2.29□□□□□ -2.04
LINC01549-202ENST00000613691 ICAM4Q14773 271 aa2.29□□□□□ -2.04
LINC01549-202ENST00000613691 CDSNQ15517 529 aa2.29□□□□□ -2.04
LINC01549-202ENST00000613691 SF1Q15637 639 aaKnown RBP2.29□□□□□ -2.04
LINC01549-202ENST00000613691 PRSS53Q2L4Q9 553 aa2.29□□□□□ -2.04
LINC01549-202ENST00000613691 SV2CQ496J9 727 aa2.29□□□□□ -2.04
LINC01549-202ENST00000613691 EGFLAMQ63HQ2 1017 aa2.29□□□□□ -2.04
LINC01549-202ENST00000613691 LARP1BQ659C4 914 aaKnown RBP2.29□□□□□ -2.04
LINC01549-202ENST00000613691 DENND5AQ6IQ26 1287 aa2.29□□□□□ -2.04
LINC01549-202ENST00000613691 ANKS3Q6ZW76 656 aa2.29□□□□□ -2.04
LINC01549-202ENST00000613691 CIR1Q86X95 450 aaPredicted RBP2.29□□□□□ -2.04
LINC01549-202ENST00000613691 PPIL6Q8IXY8 311 aa2.29□□□□□ -2.04
LINC01549-202ENST00000613691 KBTBD2Q8IY47 623 aa2.29□□□□□ -2.04
LINC01549-202ENST00000613691 CELF2-AS1Q8N7Q2 184 aa2.29□□□□□ -2.04
LINC01549-202ENST00000613691 TMEM145Q8NBT3 493 aa2.29□□□□□ -2.04
LINC01549-202ENST00000613691 PHOSPHO1Q8TCT1 267 aa2.29□□□□□ -2.04
LINC01549-202ENST00000613691 SH3RF3Q8TEJ3 882 aaPredicted RBP2.29□□□□□ -2.04
LINC01549-202ENST00000613691 PPIL4Q8WUA2 492 aaKnown RBP eCLIP2.29□□□□□ -2.04
LINC01549-202ENST00000613691 KISS1RQ969F8 398 aaPredicted RBP2.29□□□□□ -2.04
LINC01549-202ENST00000613691 C1orf159Q96HA4 380 aa2.29□□□□□ -2.04
LINC01549-202ENST00000613691 CHAMP1Q96JM3 812 aa2.29□□□□□ -2.04
LINC01549-202ENST00000613691 ZSWIM3Q96MP5 696 aa2.29□□□□□ -2.04
LINC01549-202ENST00000613691 WRNIP1Q96S55 665 aa2.29□□□□□ -2.04
LINC01549-202ENST00000613691 EPB41L1Q9H4G0 881 aa2.29□□□□□ -2.04
LINC01549-202ENST00000613691 CD248Q9HCU0 757 aa2.29□□□□□ -2.04
LINC01549-202ENST00000613691 ST7Q9NRC1 585 aa2.29□□□□□ -2.04
LINC01549-202ENST00000613691 ACTR10Q9NZ32 417 aa2.29□□□□□ -2.04
LINC01549-202ENST00000613691 MYOTQ9UBF9 498 aa2.29□□□□□ -2.04
LINC01549-202ENST00000613691 FTSJ1Q9UET6 329 aa2.29□□□□□ -2.04
LINC01549-202ENST00000613691 WDR3Q9UNX4 943 aaKnown RBP eCLIP2.29□□□□□ -2.04
LINC01549-202ENST00000613691 NPFFR2Q9Y5X5 522 aa2.29□□□□□ -2.04
LINC01549-202ENST00000613691 MRPL42Q9Y6G3 142 aaKnown RBP2.29□□□□□ -2.04
LINC01549-202ENST00000613691 ANKRD62A6NC57 917 aa2.28□□□□□ -2.04
LINC01549-202ENST00000613691 B2RBV5 119 aa2.28□□□□□ -2.04
LINC01549-202ENST00000613691 GPR42O15529 346 aa2.28□□□□□ -2.04
LINC01549-202ENST00000613691 MAFKO60675 156 aa2.28□□□□□ -2.04
LINC01549-202ENST00000613691 CAPNS1P04632 268 aa2.28□□□□□ -2.04
LINC01549-202ENST00000613691 C6P13671 934 aa2.28□□□□□ -2.04
LINC01549-202ENST00000613691 TACR2P21452 398 aa2.28□□□□□ -2.04
LINC01549-202ENST00000613691 KCNJ6P48051 423 aa2.28□□□□□ -2.04
LINC01549-202ENST00000613691 NFATC3Q12968 1075 aa2.28□□□□□ -2.04
LINC01549-202ENST00000613691 FXNQ16595 210 aa2.28□□□□□ -2.04
LINC01549-202ENST00000613691 SLC35F1Q5T1Q4 408 aa2.28□□□□□ -2.04
LINC01549-202ENST00000613691 SLFN13Q68D06 897 aa2.28□□□□□ -2.04
LINC01549-202ENST00000613691 SDE2Q6IQ49 451 aa2.28□□□□□ -2.04
LINC01549-202ENST00000613691 CYP4F22Q6NT55 531 aa2.28□□□□□ -2.04
LINC01549-202ENST00000613691 ARHGEF18Q6ZSZ5 1173 aa2.28□□□□□ -2.04
LINC01549-202ENST00000613691 SPRED1Q7Z699 444 aa2.28□□□□□ -2.04
LINC01549-202ENST00000613691 NOP9Q86U38 636 aaKnown RBP2.28□□□□□ -2.04
LINC01549-202ENST00000613691 KLHL36Q8N4N3 616 aa2.28□□□□□ -2.04
LINC01549-202ENST00000613691 DNERQ8NFT8 737 aa2.28□□□□□ -2.04
LINC01549-202ENST00000613691 IGDCC4Q8TDY8 1250 aa2.28□□□□□ -2.04
LINC01549-202ENST00000613691 MICAL1Q8TDZ2 1067 aa2.28□□□□□ -2.04
LINC01549-202ENST00000613691 ZCCHC14Q8WYQ9 949 aaKnown RBP2.28□□□□□ -2.04
LINC01549-202ENST00000613691 ARMC5Q96C12 935 aa2.28□□□□□ -2.04
LINC01549-202ENST00000613691 GPATCH3Q96I76 525 aa2.28□□□□□ -2.04
LINC01549-202ENST00000613691 SORCS2Q96PQ0 1159 aa2.28□□□□□ -2.04
LINC01549-202ENST00000613691 CDK5RAP1Q96SZ6 601 aaKnown RBP2.28□□□□□ -2.04
LINC01549-202ENST00000613691 HIRIP3Q9BW71 556 aaPredicted RBP2.28□□□□□ -2.04
LINC01549-202ENST00000613691 KLC2Q9H0B6 622 aa2.28□□□□□ -2.04
LINC01549-202ENST00000613691 EPN3Q9H201 632 aa2.28□□□□□ -2.04
LINC01549-202ENST00000613691 CDIP1Q9H305 208 aa2.28□□□□□ -2.04
LINC01549-202ENST00000613691 SMOC1Q9H4F8 434 aa2.28□□□□□ -2.04
LINC01549-202ENST00000613691 BARX1Q9HBU1 254 aaPredicted RBP2.28□□□□□ -2.04
LINC01549-202ENST00000613691 CLDND1Q9NY35 253 aa2.28□□□□□ -2.04
LINC01549-202ENST00000613691 CROTQ9UKG9 612 aa2.28□□□□□ -2.04
LINC01549-202ENST00000613691 WASF3Q9UPY6 502 aa2.28□□□□□ -2.04
LINC01549-202ENST00000613691 PATE3B3GLJ2 98 aa2.27□□□□□ -2.05
LINC01549-202ENST00000613691 KRIT1O00522 736 aa2.27□□□□□ -2.05
LINC01549-202ENST00000613691 CYR61O00622 381 aa2.27□□□□□ -2.05
LINC01549-202ENST00000613691 PPM1GO15355 546 aaPredicted RBP2.27□□□□□ -2.05
LINC01549-202ENST00000613691 SUV39H1O43463 412 aa2.27□□□□□ -2.05
LINC01549-202ENST00000613691 B4GALT4O60513 344 aa2.27□□□□□ -2.05
LINC01549-202ENST00000613691 DDAH1O94760 285 aa2.27□□□□□ -2.05
LINC01549-202ENST00000613691 CHGBP05060 677 aa2.27□□□□□ -2.05
LINC01549-202ENST00000613691 COL6A1P12109 1028 aa2.27□□□□□ -2.05
LINC01549-202ENST00000613691 HSP90B1P14625 803 aaKnown RBP2.27□□□□□ -2.05
LINC01549-202ENST00000613691 GRIA2P42262 883 aa2.27□□□□□ -2.05
LINC01549-202ENST00000613691 GDF5P43026 501 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms