RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 PRDM15P57071 1507 aaPredicted RBP5.34□□□□□ -1.55
VPS13D-213ENST00000613099 DIP2BQ9P265 1576 aa5.34□□□□□ -1.55
VPS13D-213ENST00000613099 STAT6P42226 847 aa5.34□□□□□ -1.55
VPS13D-213ENST00000613099 TRPM2O94759 1503 aa5.34□□□□□ -1.55
VPS13D-213ENST00000613099 SYNRGQ9UMZ2 1314 aa5.34□□□□□ -1.55
VPS13D-213ENST00000613099 ABCA8O94911 1581 aa5.34□□□□□ -1.55
VPS13D-213ENST00000613099 PHF20L1A8MW92 1017 aa5.34□□□□□ -1.55
VPS13D-213ENST00000613099 GIPC1O14908 333 aa5.34□□□□□ -1.55
VPS13D-213ENST00000613099 OLR1P78380 273 aa5.34□□□□□ -1.55
VPS13D-213ENST00000613099 AKNAD1Q5T1N1 836 aa5.34□□□□□ -1.55
VPS13D-213ENST00000613099 E4F1Q66K89 784 aaPredicted RBP5.34□□□□□ -1.55
VPS13D-213ENST00000613099 CREB3L3Q68CJ9 461 aa5.34□□□□□ -1.55
VPS13D-213ENST00000613099 MYCBPAPQ8TBZ2 947 aa5.34□□□□□ -1.55
VPS13D-213ENST00000613099 USP28Q96RU2 1077 aa5.34□□□□□ -1.55
VPS13D-213ENST00000613099 RPAP3Q9H6T3 665 aaPredicted RBP5.34□□□□□ -1.55
VPS13D-213ENST00000613099 CCDC162PA2VCL2 907 aa5.34□□□□□ -1.55
VPS13D-213ENST00000613099 PABPN1LA6NDY0 278 aaKnown RBP5.34□□□□□ -1.55
VPS13D-213ENST00000613099 PAK1Q13153 545 aa5.34□□□□□ -1.55
VPS13D-213ENST00000613099 RARS2Q5T160 578 aaKnown RBP5.34□□□□□ -1.55
VPS13D-213ENST00000613099 CDHR2Q9BYE9 1310 aa5.34□□□□□ -1.55
VPS13D-213ENST00000613099 F8VZ95 297 aa5.34□□□□□ -1.55
VPS13D-213ENST00000613099 HEXIM1O94992 359 aaKnown RBP5.34□□□□□ -1.55
VPS13D-213ENST00000613099 ECEL1O95672 775 aa5.34□□□□□ -1.55
VPS13D-213ENST00000613099 C4BPBP20851 252 aa5.34□□□□□ -1.55
VPS13D-213ENST00000613099 ZFP69BQ9UJL9 534 aa5.34□□□□□ -1.55
VPS13D-213ENST00000613099 GPC6Q9Y625 555 aaPredicted RBP5.34□□□□□ -1.55
VPS13D-213ENST00000613099 CCDC189A1A4V9 331 aa5.34□□□□□ -1.55
VPS13D-213ENST00000613099 MAP2K7O14733 419 aa5.34□□□□□ -1.55
VPS13D-213ENST00000613099 ASAP2O43150 1006 aa5.34□□□□□ -1.55
VPS13D-213ENST00000613099 PRKAR2BP31323 418 aa5.34□□□□□ -1.55
VPS13D-213ENST00000613099 BRD8Q9H0E9 1235 aa5.34□□□□□ -1.55
VPS13D-213ENST00000613099 NFU1Q9UMS0 254 aa5.34□□□□□ -1.55
VPS13D-213ENST00000613099 EEF1B2P24534 225 aaKnown RBP5.34□□□□□ -1.55
VPS13D-213ENST00000613099 SPARCL1Q14515 664 aa5.34□□□□□ -1.55
VPS13D-213ENST00000613099 C15orf59Q2T9L4 293 aaPredicted RBP5.34□□□□□ -1.55
VPS13D-213ENST00000613099 ZNF330Q9Y3S2 320 aaPredicted RBP5.34□□□□□ -1.55
VPS13D-213ENST00000613099 ANO9A1A5B4 782 aa5.34□□□□□ -1.55
VPS13D-213ENST00000613099 AP3B1O00203 1094 aa5.34□□□□□ -1.55
VPS13D-213ENST00000613099 ZNF12P17014 697 aa5.34□□□□□ -1.55
VPS13D-213ENST00000613099 VSNL1P62760 191 aa5.34□□□□□ -1.55
VPS13D-213ENST00000613099 SF3A3Q12874 501 aaKnown RBP eCLIP5.34□□□□□ -1.55
VPS13D-213ENST00000613099 MCRS1Q96EZ8 462 aa5.34□□□□□ -1.55
VPS13D-213ENST00000613099 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.34□□□□□ -1.55
VPS13D-213ENST00000613099 IFT172Q9UG01 1749 aa5.34□□□□□ -1.55
VPS13D-213ENST00000613099 A2ML1A8K2U0 1454 aa5.34□□□□□ -1.55
VPS13D-213ENST00000613099 RHOBTB1O94844 696 aa5.34□□□□□ -1.56
VPS13D-213ENST00000613099 HSPA6P17066 643 aa5.34□□□□□ -1.56
VPS13D-213ENST00000613099 DNM2P50570 870 aa5.34□□□□□ -1.56
VPS13D-213ENST00000613099 KIF11P52732 1056 aa5.34□□□□□ -1.56
VPS13D-213ENST00000613099 FOXR1Q6PIV2 292 aa5.34□□□□□ -1.56
VPS13D-213ENST00000613099 NCAPG2Q86XI2 1143 aa5.34□□□□□ -1.56
VPS13D-213ENST00000613099 PHKBQ93100 1093 aa5.34□□□□□ -1.56
VPS13D-213ENST00000613099 KRT12Q99456 494 aa5.34□□□□□ -1.56
VPS13D-213ENST00000613099 HAUS7Q99871 368 aa5.34□□□□□ -1.56
VPS13D-213ENST00000613099 IMPG2Q9BZV3 1241 aa5.34□□□□□ -1.56
VPS13D-213ENST00000613099 MBD2Q9UBB5 411 aa5.34□□□□□ -1.56
VPS13D-213ENST00000613099 KIF1AQ12756 1690 aa5.34□□□□□ -1.56
VPS13D-213ENST00000613099 H0Y626 953 aa5.34□□□□□ -1.56
VPS13D-213ENST00000613099 TRIM16O95361 564 aa5.34□□□□□ -1.56
VPS13D-213ENST00000613099 MYL1P05976 194 aa5.34□□□□□ -1.56
VPS13D-213ENST00000613099 OCM2P0CE71 109 aa5.34□□□□□ -1.56
VPS13D-213ENST00000613099 OCMP0CE72 109 aaPredicted RBP5.34□□□□□ -1.56
VPS13D-213ENST00000613099 RPS6KB1P23443 525 aa5.34□□□□□ -1.56
VPS13D-213ENST00000613099 MECOMQ03112 1051 aa5.34□□□□□ -1.56
VPS13D-213ENST00000613099 C2CD5Q86YS7 1000 aa5.34□□□□□ -1.56
VPS13D-213ENST00000613099 STMN3Q9NZ72 180 aa5.34□□□□□ -1.56
VPS13D-213ENST00000613099 KIAA1210Q9ULL0 1709 aa5.34□□□□□ -1.56
VPS13D-213ENST00000613099 SEMA3EO15041 775 aa5.34□□□□□ -1.56
VPS13D-213ENST00000613099 GSNP06396 782 aa5.34□□□□□ -1.56
VPS13D-213ENST00000613099 CDH24Q86UP0 819 aa5.34□□□□□ -1.56
VPS13D-213ENST00000613099 NEK9Q8TD19 979 aa5.34□□□□□ -1.56
VPS13D-213ENST00000613099 ERBB3P21860 1342 aa5.34□□□□□ -1.56
VPS13D-213ENST00000613099 DENND4BO75064 1496 aaPredicted RBP5.34□□□□□ -1.56
VPS13D-213ENST00000613099 TRIM43BA6NCK2 446 aa5.33□□□□□ -1.56
VPS13D-213ENST00000613099 PCSK2P16519 638 aa5.33□□□□□ -1.56
VPS13D-213ENST00000613099 IFNAR2P48551 515 aa5.33□□□□□ -1.56
VPS13D-213ENST00000613099 TMEM266Q2M3C6 531 aa5.33□□□□□ -1.56
VPS13D-213ENST00000613099 TOGARAM2Q6ZUX3 1019 aa5.33□□□□□ -1.56
VPS13D-213ENST00000613099 ERMNQ8TAM6 284 aa5.33□□□□□ -1.56
VPS13D-213ENST00000613099 ALG1Q9BT22 464 aa5.33□□□□□ -1.56
VPS13D-213ENST00000613099 CROTQ9UKG9 612 aa5.33□□□□□ -1.56
VPS13D-213ENST00000613099 PARP3Q9Y6F1 533 aa5.33□□□□□ -1.56
VPS13D-213ENST00000613099 PLEKHG1Q9ULL1 1385 aa5.33□□□□□ -1.56
VPS13D-213ENST00000613099 WTAPQ15007 396 aa5.33□□□□□ -1.56
VPS13D-213ENST00000613099 IQCF2Q8IXL9 164 aa5.33□□□□□ -1.56
VPS13D-213ENST00000613099 SUN5Q8TC36 379 aa5.33□□□□□ -1.56
VPS13D-213ENST00000613099 DQX1Q8TE96 717 aaKnown RBP5.33□□□□□ -1.56
VPS13D-213ENST00000613099 PIGOQ8TEQ8 1089 aa5.33□□□□□ -1.56
VPS13D-213ENST00000613099 XPO6Q96QU8 1125 aaKnown RBP5.33□□□□□ -1.56
VPS13D-213ENST00000613099 IL1RAPL2Q9NP60 686 aa5.33□□□□□ -1.56
VPS13D-213ENST00000613099 RSL24D1Q9UHA3 163 aaKnown RBP5.33□□□□□ -1.56
VPS13D-213ENST00000613099 ASNA1O43681 348 aa5.33□□□□□ -1.56
VPS13D-213ENST00000613099 MX2P20592 715 aa5.33□□□□□ -1.56
VPS13D-213ENST00000613099 ARL1P40616 181 aaPredicted RBP5.33□□□□□ -1.56
VPS13D-213ENST00000613099 GSDMAQ96QA5 445 aa5.33□□□□□ -1.56
VPS13D-213ENST00000613099 TRIM31Q9BZY9 425 aa5.33□□□□□ -1.56
VPS13D-213ENST00000613099 TRIM15Q9C019 465 aa5.33□□□□□ -1.56
VPS13D-213ENST00000613099 BLOC1S6Q9UL45 172 aa5.33□□□□□ -1.56
VPS13D-213ENST00000613099 SYNMO15061 1565 aa5.33□□□□□ -1.56
VPS13D-213ENST00000613099 THAP12O43422 761 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms