RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 TBX21Q9UL17 535 aa29.69■■■□□ 2.34
VEGFA-226ENST00000611736 PPFIA4O75335 1185 aa29.68■■■□□ 2.34
VEGFA-226ENST00000611736 HOXD8P13378 290 aaPredicted RBP29.68■■■□□ 2.34
VEGFA-226ENST00000611736 RAG1P15918 1043 aa29.68■■■□□ 2.34
VEGFA-226ENST00000611736 CEP55Q53EZ4 464 aa29.68■■■□□ 2.34
VEGFA-226ENST00000611736 GIMAP8Q8ND71 665 aaPredicted RBP29.68■■■□□ 2.34
VEGFA-226ENST00000611736 UBE2OQ9C0C9 1292 aaKnown RBP29.68■■■□□ 2.34
VEGFA-226ENST00000611736 PCDHA4Q9UN74 947 aa29.68■■■□□ 2.34
VEGFA-226ENST00000611736 TELO2Q9Y4R8 837 aa29.68■■■□□ 2.34
VEGFA-226ENST00000611736 NFRKBQ6P4R8 1299 aa29.67■■■□□ 2.34
VEGFA-226ENST00000611736 KCNH7Q9NS40 1196 aa29.67■■■□□ 2.34
VEGFA-226ENST00000611736 TRMT13Q9NUP7 481 aaKnown RBP29.67■■■□□ 2.34
VEGFA-226ENST00000611736 KCNJ14Q9UNX9 436 aa29.67■■■□□ 2.34
VEGFA-226ENST00000611736 F2P00734 622 aa29.66■■■□□ 2.34
VEGFA-226ENST00000611736 PSEN2P49810 448 aa29.66■■■□□ 2.34
VEGFA-226ENST00000611736 NSUN7Q8NE18 718 aaKnown RBP29.66■■■□□ 2.34
VEGFA-226ENST00000611736 CRYGNQ8WXF5 182 aa29.66■■■□□ 2.34
VEGFA-226ENST00000611736 GPR20Q99678 358 aa29.66■■■□□ 2.34
VEGFA-226ENST00000611736 ALG1Q9BT22 464 aa29.66■■■□□ 2.34
VEGFA-226ENST00000611736 MAFGO15525 162 aa29.65■■■□□ 2.34
VEGFA-226ENST00000611736 JAK2O60674 1132 aa29.65■■■□□ 2.34
VEGFA-226ENST00000611736 ARP10275 920 aa29.65■■■□□ 2.34
VEGFA-226ENST00000611736 BMP8BP34820 402 aa29.65■■■□□ 2.34
VEGFA-226ENST00000611736 ST3GAL1Q11201 340 aa29.65■■■□□ 2.34
VEGFA-226ENST00000611736 MFSD10Q14728 455 aa29.65■■■□□ 2.34
VEGFA-226ENST00000611736 RABEP1Q15276 862 aa29.65■■■□□ 2.34
VEGFA-226ENST00000611736 BLIDQ8IZY5 108 aa29.65■■■□□ 2.34
VEGFA-226ENST00000611736 KATNAL1Q9BW62 490 aa29.65■■■□□ 2.34
VEGFA-226ENST00000611736 PPP1R12CQ9BZL4 782 aa29.65■■■□□ 2.34
VEGFA-226ENST00000611736 GJB4Q9NTQ9 266 aa29.65■■■□□ 2.34
VEGFA-226ENST00000611736 LAMA3Q16787 3333 aa29.65■■■□□ 2.34
VEGFA-226ENST00000611736 FAM86B1E9PN63 330 aa29.64■■■□□ 2.34
VEGFA-226ENST00000611736 MEIS1O00470 390 aa29.64■■■□□ 2.34
VEGFA-226ENST00000611736 LGALS2P05162 132 aa29.64■■■□□ 2.34
VEGFA-226ENST00000611736 CYP3A4P08684 503 aa29.64■■■□□ 2.34
VEGFA-226ENST00000611736 FAM86B2P0C5J1 330 aa29.64■■■□□ 2.34
VEGFA-226ENST00000611736 FDPSP14324 419 aaKnown RBP29.64■■■□□ 2.34
VEGFA-226ENST00000611736 XBP1P17861 261 aa29.64■■■□□ 2.34
VEGFA-226ENST00000611736 FXR1P51114 621 aaKnown RBP eCLIP29.64■■■□□ 2.34
VEGFA-226ENST00000611736 KIAA0753Q2KHM9 967 aa29.64■■■□□ 2.34
VEGFA-226ENST00000611736 FAM177A1Q8N128 213 aaPredicted RBP29.64■■■□□ 2.34
VEGFA-226ENST00000611736 WASF1Q92558 559 aa29.64■■■□□ 2.34
VEGFA-226ENST00000611736 TIMP1P01033 207 aa29.63■■■□□ 2.33
VEGFA-226ENST00000611736 NPY5RQ15761 445 aa29.63■■■□□ 2.33
VEGFA-226ENST00000611736 UTP14CQ5TAP6 766 aaKnown RBP29.63■■■□□ 2.33
VEGFA-226ENST00000611736 GALNT17Q6IS24 598 aa29.63■■■□□ 2.33
VEGFA-226ENST00000611736 PLA2G4DQ86XP0 818 aa29.63■■■□□ 2.33
VEGFA-226ENST00000611736 CCDC83Q8IWF9 413 aa29.63■■■□□ 2.33
VEGFA-226ENST00000611736 DAGLBQ8NCG7 672 aa29.63■■■□□ 2.33
VEGFA-226ENST00000611736 C16orf70Q9BSU1 422 aa29.63■■■□□ 2.33
VEGFA-226ENST00000611736 AGO4Q9HCK5 861 aaKnown RBP29.63■■■□□ 2.33
VEGFA-226ENST00000611736 A0A1W2PPC1 479 aa29.62■■■□□ 2.33
VEGFA-226ENST00000611736 PTPN11Q06124 597 aaPredicted RBP29.62■■■□□ 2.33
VEGFA-226ENST00000611736 NIPA1Q7RTP0 329 aa29.62■■■□□ 2.33
VEGFA-226ENST00000611736 TBC1D32Q96NH3 1257 aa29.62■■■□□ 2.33
VEGFA-226ENST00000611736 PHF20Q9BVI0 1012 aa29.62■■■□□ 2.33
VEGFA-226ENST00000611736 HAS3O00219 553 aa29.61■■■□□ 2.33
VEGFA-226ENST00000611736 CYP2C9P11712 490 aa29.61■■■□□ 2.33
VEGFA-226ENST00000611736 TRIM50Q86XT4 487 aa29.61■■■□□ 2.33
VEGFA-226ENST00000611736 C7orf31Q8N865 590 aa29.61■■■□□ 2.33
VEGFA-226ENST00000611736 ZSCAN31Q96LW9 406 aaPredicted RBP29.61■■■□□ 2.33
VEGFA-226ENST00000611736 UIMC1Q96RL1 719 aa29.61■■■□□ 2.33
VEGFA-226ENST00000611736 SDF4Q9BRK5 362 aa29.61■■■□□ 2.33
VEGFA-226ENST00000611736 HIPK3Q9H422 1215 aa29.61■■■□□ 2.33
VEGFA-226ENST00000611736 JPH1Q9HDC5 661 aaPredicted RBP29.61■■■□□ 2.33
VEGFA-226ENST00000611736 HDAC6Q9UBN7 1215 aa29.61■■■□□ 2.33
VEGFA-226ENST00000611736 IGLV3-22A0A075B6J6 115 aa29.6■■■□□ 2.33
VEGFA-226ENST00000611736 H3BRB1 525 aa29.6■■■□□ 2.33
VEGFA-226ENST00000611736 M0R2N6 131 aa29.6■■■□□ 2.33
VEGFA-226ENST00000611736 SUPT20HL2P0C7V6 817 aa29.6■■■□□ 2.33
VEGFA-226ENST00000611736 CYP2C18P33260 490 aa29.6■■■□□ 2.33
VEGFA-226ENST00000611736 FOSBP53539 338 aa29.6■■■□□ 2.33
VEGFA-226ENST00000611736 ITGB3BPQ13352 177 aaPredicted RBP29.6■■■□□ 2.33
VEGFA-226ENST00000611736 GDF6Q6KF10 455 aaPredicted RBP29.6■■■□□ 2.33
VEGFA-226ENST00000611736 SESTD1Q86VW0 696 aa29.6■■■□□ 2.33
VEGFA-226ENST00000611736 TUT1Q9H6E5 874 aaKnown RBP29.6■■■□□ 2.33
VEGFA-226ENST00000611736 NOD1Q9Y239 953 aa29.6■■■□□ 2.33
VEGFA-226ENST00000611736 LAMA2P24043 3122 aaKnown RBP29.6■■■□□ 2.33
VEGFA-226ENST00000611736 TCF7P36402 384 aaPredicted RBP29.59■■■□□ 2.33
VEGFA-226ENST00000611736 PRR16Q569H4 304 aa29.59■■■□□ 2.33
VEGFA-226ENST00000611736 TBCKQ8TEA7 893 aa29.59■■■□□ 2.33
VEGFA-226ENST00000611736 NOC4LQ9BVI4 516 aaKnown RBP29.59■■■□□ 2.33
VEGFA-226ENST00000611736 SH2B1Q9NRF2 756 aaPredicted RBP29.59■■■□□ 2.33
VEGFA-226ENST00000611736 SLC9A2Q9UBY0 812 aa29.59■■■□□ 2.33
VEGFA-226ENST00000611736 GTF2IRD1Q9UHL9 959 aa29.59■■■□□ 2.33
VEGFA-226ENST00000611736 NFASCO94856 1347 aa29.59■■■□□ 2.33
VEGFA-226ENST00000611736 UMODL1Q5DID0 1318 aa29.59■■■□□ 2.33
VEGFA-226ENST00000611736 GSTTP1A0A1W2PQM5 241 aa29.58■■■□□ 2.33
VEGFA-226ENST00000611736 ST18O60284 1047 aa29.58■■■□□ 2.33
VEGFA-226ENST00000611736 CIITAP33076 1130 aa29.58■■■□□ 2.33
VEGFA-226ENST00000611736 SETQ01105 290 aaPredicted RBP29.58■■■□□ 2.33
VEGFA-226ENST00000611736 FPGSQ05932 587 aa29.58■■■□□ 2.33
VEGFA-226ENST00000611736 PTGISQ16647 500 aa29.58■■■□□ 2.33
VEGFA-226ENST00000611736 MFSD5Q6N075 450 aa29.58■■■□□ 2.33
VEGFA-226ENST00000611736 TDHQ8IZJ6 230 aa29.58■■■□□ 2.33
VEGFA-226ENST00000611736 SEPT1Q8WYJ6 367 aa29.58■■■□□ 2.33
VEGFA-226ENST00000611736 BACH2Q9BYV9 841 aa29.58■■■□□ 2.33
VEGFA-226ENST00000611736 TRIP12Q14669 1992 aaPredicted RBP29.57■■■□□ 2.32
VEGFA-226ENST00000611736 DDX39AO00148 427 aaKnown RBP29.57■■■□□ 2.32
VEGFA-226ENST00000611736 EDIL3O43854 480 aa29.57■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms