RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 H0YIN7 160 aa9.52□□□□□ -0.89
LIG4-204ENST00000611712 PSMD14O00487 310 aa9.52□□□□□ -0.89
LIG4-204ENST00000611712 HOXA13P31271 388 aaPredicted RBP9.52□□□□□ -0.89
LIG4-204ENST00000611712 CCT5P48643 541 aa9.52□□□□□ -0.89
LIG4-204ENST00000611712 PDIA5Q14554 519 aa9.52□□□□□ -0.89
LIG4-204ENST00000611712 RCSD1Q6JBY9 416 aa9.52□□□□□ -0.89
LIG4-204ENST00000611712 B4GALNT4Q76KP1 1039 aa9.52□□□□□ -0.89
LIG4-204ENST00000611712 TMC4Q7Z404 712 aa9.52□□□□□ -0.89
LIG4-204ENST00000611712 ADAT2Q7Z6V5 191 aaKnown RBP9.52□□□□□ -0.89
LIG4-204ENST00000611712 CPLX4Q7Z7G2 160 aa9.52□□□□□ -0.89
LIG4-204ENST00000611712 SELENOSQ9BQE4 189 aa9.52□□□□□ -0.89
LIG4-204ENST00000611712 CEP72Q9P209 647 aa9.52□□□□□ -0.89
LIG4-204ENST00000611712 STIM2Q9P246 746 aa9.52□□□□□ -0.89
LIG4-204ENST00000611712 BZW2Q9Y6E2 419 aaKnown RBP9.52□□□□□ -0.89
LIG4-204ENST00000611712 SPOPO43791 374 aa9.52□□□□□ -0.89
LIG4-204ENST00000611712 PALMO75781 387 aa9.52□□□□□ -0.89
LIG4-204ENST00000611712 PDE6BP35913 854 aa9.52□□□□□ -0.89
LIG4-204ENST00000611712 GGCXP38435 758 aa9.52□□□□□ -0.89
LIG4-204ENST00000611712 MAP2K1Q02750 393 aaPredicted RBP9.52□□□□□ -0.89
LIG4-204ENST00000611712 NAA35Q5VZE5 725 aa9.52□□□□□ -0.89
LIG4-204ENST00000611712 PRR5LQ6MZQ0 368 aa9.52□□□□□ -0.89
LIG4-204ENST00000611712 BARGINQ6ZT62 677 aa9.52□□□□□ -0.89
LIG4-204ENST00000611712 USP37Q86T82 979 aa9.52□□□□□ -0.89
LIG4-204ENST00000611712 TMEM139Q8IV31 216 aa9.52□□□□□ -0.89
LIG4-204ENST00000611712 SPATA20Q8TB22 786 aa9.52□□□□□ -0.89
LIG4-204ENST00000611712 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.52□□□□□ -0.89
LIG4-204ENST00000611712 PI4KBQ9UBF8 816 aa9.52□□□□□ -0.89
LIG4-204ENST00000611712 RNF14Q9UBS8 474 aa9.52□□□□□ -0.89
LIG4-204ENST00000611712 GPR75-ASB3A0A0A6YYF3 556 aa9.52□□□□□ -0.89
LIG4-204ENST00000611712 POTEFA5A3E0 1075 aa9.52□□□□□ -0.89
LIG4-204ENST00000611712 CCDC169A6NNP5 214 aa9.52□□□□□ -0.89
LIG4-204ENST00000611712 POTEIP0CG38 1075 aa9.52□□□□□ -0.89
LIG4-204ENST00000611712 NEFHP12036 1026 aa9.52□□□□□ -0.89
LIG4-204ENST00000611712 STAT3P40763 770 aa9.52□□□□□ -0.89
LIG4-204ENST00000611712 SP4Q02446 784 aa9.52□□□□□ -0.89
LIG4-204ENST00000611712 QRICH1Q2TAL8 776 aa9.52□□□□□ -0.89
LIG4-204ENST00000611712 BEND6Q5SZJ8 279 aaPredicted RBP9.52□□□□□ -0.89
LIG4-204ENST00000611712 LRCH2Q5VUJ6 765 aa9.52□□□□□ -0.89
LIG4-204ENST00000611712 POTEGQ6S5H5 508 aa9.52□□□□□ -0.89
LIG4-204ENST00000611712 POTEEQ6S8J3 1075 aa9.52□□□□□ -0.89
LIG4-204ENST00000611712 RUFY4Q6ZNE9 571 aa9.52□□□□□ -0.89
LIG4-204ENST00000611712 TBC1D16Q8TBP0 767 aa9.52□□□□□ -0.89
LIG4-204ENST00000611712 DNAJC7Q99615 494 aa9.52□□□□□ -0.89
LIG4-204ENST00000611712 LACRTQ9GZZ8 138 aa9.52□□□□□ -0.89
LIG4-204ENST00000611712 SNX12Q9UMY4 172 aa9.52□□□□□ -0.89
LIG4-204ENST00000611712 DUSP10Q9Y6W6 482 aa9.52□□□□□ -0.89
LIG4-204ENST00000611712 LRRC10BA6NIK2 292 aa9.51□□□□□ -0.89
LIG4-204ENST00000611712 SFI1A8K8P3 1242 aa9.51□□□□□ -0.89
LIG4-204ENST00000611712 TRIM37O94972 964 aa9.51□□□□□ -0.89
LIG4-204ENST00000611712 PLEKP08567 350 aaPredicted RBP9.51□□□□□ -0.89
LIG4-204ENST00000611712 HOXA7P31268 230 aaPredicted RBP9.51□□□□□ -0.89
LIG4-204ENST00000611712 CTNNA1P35221 906 aaKnown RBP9.51□□□□□ -0.89
LIG4-204ENST00000611712 KCNH2Q12809 1159 aa9.51□□□□□ -0.89
LIG4-204ENST00000611712 ODR4Q5SWX8 454 aa9.51□□□□□ -0.89
LIG4-204ENST00000611712 SPATA4Q8NEY3 305 aa9.51□□□□□ -0.89
LIG4-204ENST00000611712 COG1Q8WTW3 980 aa9.51□□□□□ -0.89
LIG4-204ENST00000611712 CEP63Q96MT8 703 aa9.51□□□□□ -0.89
LIG4-204ENST00000611712 DPH5Q9H2P9 285 aa9.51□□□□□ -0.89
LIG4-204ENST00000611712 SH2D4AQ9H788 454 aa9.51□□□□□ -0.89
LIG4-204ENST00000611712 PODXL2Q9NZ53 605 aa9.51□□□□□ -0.89
LIG4-204ENST00000611712 MTRF1LQ9UGC7 380 aaKnown RBP9.51□□□□□ -0.89
LIG4-204ENST00000611712 TCP10L2B9ZVM9 353 aa9.51□□□□□ -0.89
LIG4-204ENST00000611712 N4BP1O75113 896 aaKnown RBP9.51□□□□□ -0.89
LIG4-204ENST00000611712 POLR2MP0CAP2 368 aa9.51□□□□□ -0.89
LIG4-204ENST00000611712 BCRP11274 1271 aa9.51□□□□□ -0.89
LIG4-204ENST00000611712 BMP3P12645 472 aa9.51□□□□□ -0.89
LIG4-204ENST00000611712 INPP5BP32019 993 aa9.51□□□□□ -0.89
LIG4-204ENST00000611712 ZNF543Q08ER8 600 aa9.51□□□□□ -0.89
LIG4-204ENST00000611712 SEPT7Q16181 437 aaKnown RBP9.51□□□□□ -0.89
LIG4-204ENST00000611712 KRT71Q3SY84 523 aa9.51□□□□□ -0.89
LIG4-204ENST00000611712 SEL1L2Q5TEA6 688 aa9.51□□□□□ -0.89
LIG4-204ENST00000611712 ALKBH5Q6P6C2 394 aaKnown RBP9.51□□□□□ -0.89
LIG4-204ENST00000611712 FAM186BQ8IYM0 893 aa9.51□□□□□ -0.89
LIG4-204ENST00000611712 NLGN1Q8N2Q7 840 aa9.51□□□□□ -0.89
LIG4-204ENST00000611712 CHURC1Q8WUH1 139 aa9.51□□□□□ -0.89
LIG4-204ENST00000611712 HNRNPLLQ8WVV9 542 aaKnown RBP9.51□□□□□ -0.89
LIG4-204ENST00000611712 DHX36Q9H2U1 1008 aaKnown RBP9.51□□□□□ -0.89
LIG4-204ENST00000611712 GCNT4Q9P109 453 aa9.51□□□□□ -0.89
LIG4-204ENST00000611712 MTUS1Q9ULD2 1270 aa9.51□□□□□ -0.89
LIG4-204ENST00000611712 NFU1Q9UMS0 254 aa9.51□□□□□ -0.89
LIG4-204ENST00000611712 ANKRD65E5RJM6 399 aa9.51□□□□□ -0.89
LIG4-204ENST00000611712 CYTH3O43739 400 aa9.51□□□□□ -0.89
LIG4-204ENST00000611712 SASH3O75995 380 aa9.51□□□□□ -0.89
LIG4-204ENST00000611712 GFPT2O94808 682 aa9.51□□□□□ -0.89
LIG4-204ENST00000611712 ARHGAP4P98171 946 aa9.51□□□□□ -0.89
LIG4-204ENST00000611712 PDXDC1Q6P996 788 aa9.51□□□□□ -0.89
LIG4-204ENST00000611712 CCDC121Q6ZUS5 278 aa9.51□□□□□ -0.89
LIG4-204ENST00000611712 SFR1Q86XK3 245 aa9.51□□□□□ -0.89
LIG4-204ENST00000611712 PPM1EQ8WY54 764 aa9.51□□□□□ -0.89
LIG4-204ENST00000611712 ERGIC2Q96RQ1 377 aa9.51□□□□□ -0.89
LIG4-204ENST00000611712 CSRNP1Q96S65 589 aa9.51□□□□□ -0.89
LIG4-204ENST00000611712 LRRC1Q9BTT6 524 aa9.51□□□□□ -0.89
LIG4-204ENST00000611712 HOMER2Q9NSB8 354 aa9.51□□□□□ -0.89
LIG4-204ENST00000611712 EEF2P13639 858 aaKnown RBP9.5□□□□□ -0.89
LIG4-204ENST00000611712 GJC1P36383 396 aa9.5□□□□□ -0.89
LIG4-204ENST00000611712 IL17AQ16552 155 aa9.5□□□□□ -0.89
LIG4-204ENST00000611712 PPP1R18Q6NYC8 613 aa9.5□□□□□ -0.89
LIG4-204ENST00000611712 EMBQ6PCB8 327 aa9.5□□□□□ -0.89
LIG4-204ENST00000611712 ANKZF1Q9H8Y5 726 aa9.5□□□□□ -0.89
LIG4-204ENST00000611712 NPHP3-ACAD11A0A0J9YXS1 232 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms