RNA–Protein interactions for RNA: ENST00000611614.4

COPS7B-223, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3 BASIC

Gene COPS7B, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-223ENST00000611614 USP17L22D6RA61 530 aa15.44■□□□□ 0.06
COPS7B-223ENST00000611614 USP17L17D6RBQ6 530 aa15.44■□□□□ 0.06
COPS7B-223ENST00000611614 USP17L19D6RCP7 530 aa15.44■□□□□ 0.06
COPS7B-223ENST00000611614 USP17L20D6RJB6 530 aa15.44■□□□□ 0.06
COPS7B-223ENST00000611614 TULP2O00295 520 aa15.44■□□□□ 0.06
COPS7B-223ENST00000611614 FOSP01100 380 aaPredicted RBP15.44■□□□□ 0.06
COPS7B-223ENST00000611614 USP17L24Q0WX57 530 aa15.44■□□□□ 0.06
COPS7B-223ENST00000611614 MUM1L1Q5H9M0 696 aa15.44■□□□□ 0.06
COPS7B-223ENST00000611614 USP17L6PQ6QN14 398 aa15.44■□□□□ 0.06
COPS7B-223ENST00000611614 TRIM47Q96LD4 638 aa15.44■□□□□ 0.06
COPS7B-223ENST00000611614 TRIM9Q9C026 710 aa15.44■□□□□ 0.06
COPS7B-223ENST00000611614 RPAP3Q9H6T3 665 aaPredicted RBP15.44■□□□□ 0.06
COPS7B-223ENST00000611614 EMILIN3Q9NT22 766 aa15.44■□□□□ 0.06
COPS7B-223ENST00000611614 CCDC151A5D8V7 595 aa15.43■□□□□ 0.06
COPS7B-223ENST00000611614 CLK2P49760 499 aaKnown RBP15.43■□□□□ 0.06
COPS7B-223ENST00000611614 AMPD3Q01432 767 aa15.43■□□□□ 0.06
COPS7B-223ENST00000611614 TTI2Q6NXR4 508 aa15.43■□□□□ 0.06
COPS7B-223ENST00000611614 CYP26C1Q6V0L0 522 aa15.43■□□□□ 0.06
COPS7B-223ENST00000611614 POTEDQ86YR6 584 aa15.43■□□□□ 0.06
COPS7B-223ENST00000611614 MB21D1Q8N884 522 aa15.43■□□□□ 0.06
COPS7B-223ENST00000611614 RBM46Q8TBY0 533 aaKnown RBP15.43■□□□□ 0.06
COPS7B-223ENST00000611614 CALML4Q96GE6 196 aa15.43■□□□□ 0.06
COPS7B-223ENST00000611614 MTMR9Q96QG7 549 aa15.43■□□□□ 0.06
COPS7B-223ENST00000611614 MMTAG2Q9BU76 263 aaKnown RBP15.43■□□□□ 0.06
COPS7B-223ENST00000611614 EXOC1Q9NV70 894 aa15.43■□□□□ 0.06
COPS7B-223ENST00000611614 PNMA2Q9UL42 364 aa15.43■□□□□ 0.06
COPS7B-223ENST00000611614 A0A1W2PQC6 194 aa15.43■□□□□ 0.06
COPS7B-223ENST00000611614 LGALS16A8MUM7 142 aa15.43■□□□□ 0.06
COPS7B-223ENST00000611614 FDX1P10109 184 aa15.43■□□□□ 0.06
COPS7B-223ENST00000611614 PPP1R2P41236 205 aa15.43■□□□□ 0.06
COPS7B-223ENST00000611614 HMGCS2P54868 508 aa15.43■□□□□ 0.06
COPS7B-223ENST00000611614 SLC20A2Q08357 652 aa15.43■□□□□ 0.06
COPS7B-223ENST00000611614 PDE4DQ08499 809 aa15.43■□□□□ 0.06
COPS7B-223ENST00000611614 SMC1AQ14683 1233 aaKnown RBP15.43■□□□□ 0.06
COPS7B-223ENST00000611614 MSL3Q8N5Y2 521 aaKnown RBP15.43■□□□□ 0.06
COPS7B-223ENST00000611614 CDCA5Q96FF9 252 aa15.43■□□□□ 0.06
COPS7B-223ENST00000611614 LZTFL1Q9NQ48 299 aa15.43■□□□□ 0.06
COPS7B-223ENST00000611614 PSD3Q9NYI0 1048 aa15.43■□□□□ 0.06
COPS7B-223ENST00000611614 MAGEC2Q9UBF1 373 aaPredicted RBP15.43■□□□□ 0.06
COPS7B-223ENST00000611614 POLR2AP24928 1970 aaKnown RBP15.43■□□□□ 0.06
COPS7B-223ENST00000611614 DCAF8L1A6NGE4 600 aa15.42■□□□□ 0.06
COPS7B-223ENST00000611614 RNF225M0QZC1 329 aaPredicted RBP15.42■□□□□ 0.06
COPS7B-223ENST00000611614 SEC31AO94979 1220 aaKnown RBP15.42■□□□□ 0.06
COPS7B-223ENST00000611614 OAS2P29728 719 aaKnown RBP15.42■□□□□ 0.06
COPS7B-223ENST00000611614 ASIC1P78348 528 aa15.42■□□□□ 0.06
COPS7B-223ENST00000611614 VGLL4Q14135 290 aa15.42■□□□□ 0.06
COPS7B-223ENST00000611614 CALCRLQ16602 461 aa15.42■□□□□ 0.06
COPS7B-223ENST00000611614 CCPG1Q9ULG6 757 aa15.42■□□□□ 0.06
COPS7B-223ENST00000611614 SSC5DA1L4H1 1573 aa15.42■□□□□ 0.06
COPS7B-223ENST00000611614 DOCK1Q14185 1865 aa15.42■□□□□ 0.06
COPS7B-223ENST00000611614 BICDL2A1A5D9 508 aa15.42■□□□□ 0.06
COPS7B-223ENST00000611614 KIF5CO60282 957 aa15.42■□□□□ 0.06
COPS7B-223ENST00000611614 MARCH6O60337 910 aa15.42■□□□□ 0.06
COPS7B-223ENST00000611614 ZBED4O75132 1171 aa15.42■□□□□ 0.06
COPS7B-223ENST00000611614 GCFC2P16383 781 aaKnown RBP15.42■□□□□ 0.06
COPS7B-223ENST00000611614 CCNE1P24864 410 aa15.42■□□□□ 0.06
COPS7B-223ENST00000611614 KRT9P35527 623 aa15.42■□□□□ 0.06
COPS7B-223ENST00000611614 TXKP42681 527 aa15.42■□□□□ 0.06
COPS7B-223ENST00000611614 FXR2P51116 673 aaKnown RBP eCLIP15.42■□□□□ 0.06
COPS7B-223ENST00000611614 ERVK-24P63145 666 aa15.42■□□□□ 0.06
COPS7B-223ENST00000611614 DLK2Q6UY11 383 aa15.42■□□□□ 0.06
COPS7B-223ENST00000611614 LDHDQ86WU2 507 aa15.42■□□□□ 0.06
COPS7B-223ENST00000611614 CEP112Q8N8E3 955 aa15.42■□□□□ 0.06
COPS7B-223ENST00000611614 ZNF507Q8TCN5 953 aa15.42■□□□□ 0.06
COPS7B-223ENST00000611614 P2RX5Q93086 422 aa15.42■□□□□ 0.06
COPS7B-223ENST00000611614 DUSP9Q99956 384 aaKnown RBP15.42■□□□□ 0.06
COPS7B-223ENST00000611614 PARD6BQ9BYG5 372 aa15.42■□□□□ 0.06
COPS7B-223ENST00000611614 ABCB11O95342 1321 aa15.42■□□□□ 0.06
COPS7B-223ENST00000611614 MEIS2O14770 477 aa15.41■□□□□ 0.06
COPS7B-223ENST00000611614 ICAM1P05362 532 aa15.41■□□□□ 0.06
COPS7B-223ENST00000611614 HNRNPH2P55795 449 aaKnown RBP15.41■□□□□ 0.06
COPS7B-223ENST00000611614 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.41■□□□□ 0.06
COPS7B-223ENST00000611614 ARMC9Q7Z3E5 817 aa15.41■□□□□ 0.06
COPS7B-223ENST00000611614 ANKRD13AQ8IZ07 590 aa15.41■□□□□ 0.06
COPS7B-223ENST00000611614 HNRNPLLQ8WVV9 542 aaKnown RBP15.41■□□□□ 0.06
COPS7B-223ENST00000611614 ANO3Q9BYT9 981 aa15.41■□□□□ 0.06
COPS7B-223ENST00000611614 LRWD1Q9UFC0 647 aa15.41■□□□□ 0.06
COPS7B-223ENST00000611614 PPP1R9AQ9ULJ8 1098 aa15.41■□□□□ 0.06
COPS7B-223ENST00000611614 GCOM1H8Y6P7 765 aaPredicted RBP15.41■□□□□ 0.06
COPS7B-223ENST00000611614 POLR3GO15318 223 aaPredicted RBP15.41■□□□□ 0.06
COPS7B-223ENST00000611614 SASH3O75995 380 aa15.41■□□□□ 0.06
COPS7B-223ENST00000611614 CFBP00751 764 aa15.41■□□□□ 0.06
COPS7B-223ENST00000611614 POLR2MP0CAP2 368 aa15.41■□□□□ 0.06
COPS7B-223ENST00000611614 DGKZQ13574 1117 aa15.41■□□□□ 0.06
COPS7B-223ENST00000611614 TMEM266Q2M3C6 531 aa15.41■□□□□ 0.06
COPS7B-223ENST00000611614 COBLL1Q53SF7 1204 aa15.41■□□□□ 0.06
COPS7B-223ENST00000611614 SRGAP1Q7Z6B7 1085 aa15.41■□□□□ 0.06
COPS7B-223ENST00000611614 CPXCR1Q8N123 301 aa15.41■□□□□ 0.06
COPS7B-223ENST00000611614 CSGALNACT2Q8N6G5 542 aa15.41■□□□□ 0.06
COPS7B-223ENST00000611614 C12orf42Q96LP6 360 aa15.41■□□□□ 0.06
COPS7B-223ENST00000611614 IRX2Q9BZI1 471 aaPredicted RBP15.41■□□□□ 0.06
COPS7B-223ENST00000611614 EHMT1Q9H9B1 1298 aa15.41■□□□□ 0.06
COPS7B-223ENST00000611614 AFG3L2Q9Y4W6 797 aa15.41■□□□□ 0.06
COPS7B-223ENST00000611614 USP11P51784 963 aa15.4■□□□□ 0.06
COPS7B-223ENST00000611614 STK4Q13043 487 aa15.4■□□□□ 0.06
COPS7B-223ENST00000611614 GRB10Q13322 594 aa15.4■□□□□ 0.06
COPS7B-223ENST00000611614 PPP4R3AQ6IN85 833 aa15.4■□□□□ 0.06
COPS7B-223ENST00000611614 CNNM4Q6P4Q7 775 aa15.4■□□□□ 0.06
COPS7B-223ENST00000611614 SV2BQ7L1I2 683 aa15.4■□□□□ 0.06
COPS7B-223ENST00000611614 EXOC4Q96A65 974 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms