RNA–Protein interactions for RNA: ENST00000611457.4

CBWD1-219, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 3,324 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-219ENST00000611457 GTF3C6Q969F1 213 aa8.21□□□□□ -1.09
CBWD1-219ENST00000611457 TRIM43Q96BQ3 446 aaPredicted RBP8.21□□□□□ -1.09
CBWD1-219ENST00000611457 FAM189BP81408 668 aa8.21□□□□□ -1.1
CBWD1-219ENST00000611457 GPNMBQ14956 572 aa8.21□□□□□ -1.1
CBWD1-219ENST00000611457 SNX21Q969T3 373 aa8.21□□□□□ -1.1
CBWD1-219ENST00000611457 FAM167AQ96KS9 214 aa8.21□□□□□ -1.1
CBWD1-219ENST00000611457 FAM20AQ96MK3 541 aa8.21□□□□□ -1.1
CBWD1-219ENST00000611457 SLC12A7Q9Y666 1083 aa8.21□□□□□ -1.1
CBWD1-219ENST00000611457 PRDM1O75626 825 aa8.21□□□□□ -1.1
CBWD1-219ENST00000611457 PDE4DQ08499 809 aa8.21□□□□□ -1.1
CBWD1-219ENST00000611457 BFSP2Q13515 415 aa8.21□□□□□ -1.1
CBWD1-219ENST00000611457 TAF2Q6P1X5 1199 aa8.21□□□□□ -1.1
CBWD1-219ENST00000611457 CNKSR3Q6P9H4 555 aa8.21□□□□□ -1.1
CBWD1-219ENST00000611457 RPUSD2Q8IZ73 545 aaKnown RBP8.21□□□□□ -1.1
CBWD1-219ENST00000611457 MICALL1Q8N3F8 863 aa8.21□□□□□ -1.1
CBWD1-219ENST00000611457 MAP7D2Q96T17 732 aa8.21□□□□□ -1.1
CBWD1-219ENST00000611457 PAGR1Q9BTK6 254 aa8.21□□□□□ -1.1
CBWD1-219ENST00000611457 TIPINQ9BVW5 301 aa8.21□□□□□ -1.1
CBWD1-219ENST00000611457 PCDHA4Q9UN74 947 aa8.21□□□□□ -1.1
CBWD1-219ENST00000611457 TDRD15B5MCY1 1934 aaKnown RBP8.2□□□□□ -1.1
CBWD1-219ENST00000611457 ABHD14A-ACY1A0A1B0GW23 586 aa8.2□□□□□ -1.1
CBWD1-219ENST00000611457 CCDC69A6NI79 296 aa8.2□□□□□ -1.1
CBWD1-219ENST00000611457 TAL1P17542 331 aaPredicted RBP8.2□□□□□ -1.1
CBWD1-219ENST00000611457 UBA1P22314 1058 aaKnown RBP8.2□□□□□ -1.1
CBWD1-219ENST00000611457 RAB30Q15771 203 aa8.2□□□□□ -1.1
CBWD1-219ENST00000611457 BLOC1S2Q6QNY1 142 aa8.2□□□□□ -1.1
CBWD1-219ENST00000611457 DHX38Q92620 1227 aaKnown RBP8.2□□□□□ -1.1
CBWD1-219ENST00000611457 WDR11Q9BZH6 1224 aa8.2□□□□□ -1.1
CBWD1-219ENST00000611457 AP5M1Q9H0R1 490 aa8.2□□□□□ -1.1
CBWD1-219ENST00000611457 SLKQ9H2G2 1235 aaPredicted RBP8.2□□□□□ -1.1
CBWD1-219ENST00000611457 RWDD3Q9Y3V2 267 aa8.2□□□□□ -1.1
CBWD1-219ENST00000611457 PCDHA1Q9Y5I3 950 aa8.2□□□□□ -1.1
CBWD1-219ENST00000611457 LINC00271P0C7V0 271 aa8.2□□□□□ -1.1
CBWD1-219ENST00000611457 PSEN2P49810 448 aa8.2□□□□□ -1.1
CBWD1-219ENST00000611457 JAK3P52333 1124 aa8.2□□□□□ -1.1
CBWD1-219ENST00000611457 KRT76Q01546 638 aa8.2□□□□□ -1.1
CBWD1-219ENST00000611457 CNTN2Q02246 1040 aa8.2□□□□□ -1.1
CBWD1-219ENST00000611457 KRT25Q7Z3Z0 450 aa8.2□□□□□ -1.1
CBWD1-219ENST00000611457 SKAP1Q86WV1 359 aa8.2□□□□□ -1.1
CBWD1-219ENST00000611457 ZNF689Q96CS4 500 aaPredicted RBP8.2□□□□□ -1.1
CBWD1-219ENST00000611457 PAWRQ96IZ0 340 aaKnown RBP8.2□□□□□ -1.1
CBWD1-219ENST00000611457 TAAR1Q96RJ0 339 aa8.2□□□□□ -1.1
CBWD1-219ENST00000611457 PIGSQ96S52 555 aa8.2□□□□□ -1.1
CBWD1-219ENST00000611457 INCENPQ9NQS7 918 aa8.2□□□□□ -1.1
CBWD1-219ENST00000611457 H0YGN5 161 aa8.19□□□□□ -1.1
CBWD1-219ENST00000611457 PSMD10O75832 226 aa8.19□□□□□ -1.1
CBWD1-219ENST00000611457 ARIH2O95376 493 aa8.19□□□□□ -1.1
CBWD1-219ENST00000611457 ASGR1P07306 291 aa8.19□□□□□ -1.1
CBWD1-219ENST00000611457 GNAT1P11488 350 aa8.19□□□□□ -1.1
CBWD1-219ENST00000611457 U2AF2P26368 475 aaKnown RBP eCLIP8.19□□□□□ -1.1
CBWD1-219ENST00000611457 ADCY7P51828 1080 aa8.19□□□□□ -1.1
CBWD1-219ENST00000611457 ENPEPQ07075 957 aa8.19□□□□□ -1.1
CBWD1-219ENST00000611457 SLC4A8Q2Y0W8 1093 aa8.19□□□□□ -1.1
CBWD1-219ENST00000611457 ADCK5Q3MIX3 580 aa8.19□□□□□ -1.1
CBWD1-219ENST00000611457 PLEKHG4Q58EX7 1191 aa8.19□□□□□ -1.1
CBWD1-219ENST00000611457 DIS3LQ8TF46 1054 aaKnown RBP8.19□□□□□ -1.1
CBWD1-219ENST00000611457 CCDC51Q96ER9 411 aa8.19□□□□□ -1.1
CBWD1-219ENST00000611457 INTS4Q96HW7 963 aaKnown RBP8.19□□□□□ -1.1
CBWD1-219ENST00000611457 FOXP1Q9H334 677 aaPredicted RBP8.19□□□□□ -1.1
CBWD1-219ENST00000611457 SENP2Q9HC62 589 aa8.19□□□□□ -1.1
CBWD1-219ENST00000611457 STX8Q9UNK0 236 aa8.19□□□□□ -1.1
CBWD1-219ENST00000611457 CYP46A1Q9Y6A2 500 aa8.19□□□□□ -1.1
CBWD1-219ENST00000611457 GSTTP1A0A1W2PQM5 241 aa8.19□□□□□ -1.1
CBWD1-219ENST00000611457 CDC27P30260 824 aa8.19□□□□□ -1.1
CBWD1-219ENST00000611457 CYP2C19P33261 490 aa8.19□□□□□ -1.1
CBWD1-219ENST00000611457 SOX10P56693 466 aa8.19□□□□□ -1.1
CBWD1-219ENST00000611457 DSC3Q14574 896 aa8.19□□□□□ -1.1
CBWD1-219ENST00000611457 TMEM199Q8N511 208 aa8.19□□□□□ -1.1
CBWD1-219ENST00000611457 DDX11Q96FC9 970 aa8.19□□□□□ -1.1
CBWD1-219ENST00000611457 ZBTB42B2RXF5 422 aa8.19□□□□□ -1.1
CBWD1-219ENST00000611457 PAX3P23760 479 aa8.19□□□□□ -1.1
CBWD1-219ENST00000611457 FPGSQ05932 587 aa8.19□□□□□ -1.1
CBWD1-219ENST00000611457 SPIRE1Q08AE8 756 aa8.19□□□□□ -1.1
CBWD1-219ENST00000611457 ITGA7Q13683 1181 aa8.19□□□□□ -1.1
CBWD1-219ENST00000611457 FAM187BQ17R55 369 aa8.19□□□□□ -1.1
CBWD1-219ENST00000611457 TMEM240Q5SV17 173 aa8.19□□□□□ -1.1
CBWD1-219ENST00000611457 RTL10Q7L3V2 364 aa8.19□□□□□ -1.1
CBWD1-219ENST00000611457 SPICE1Q8N0Z3 855 aa8.19□□□□□ -1.1
CBWD1-219ENST00000611457 RMDN3Q96TC7 470 aa8.19□□□□□ -1.1
CBWD1-219ENST00000611457 WNT8AQ9H1J5 351 aa8.19□□□□□ -1.1
CBWD1-219ENST00000611457 SEC63Q9UGP8 760 aaKnown RBP8.19□□□□□ -1.1
CBWD1-219ENST00000611457 HELZP42694 1942 aaKnown RBP8.19□□□□□ -1.1
CBWD1-219ENST00000611457 TRIP12Q14669 1992 aaPredicted RBP8.18□□□□□ -1.1
CBWD1-219ENST00000611457 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.18□□□□□ -1.1
CBWD1-219ENST00000611457 MYADML2A6NDP7 307 aa8.18□□□□□ -1.1
CBWD1-219ENST00000611457 DCDC2CA8MYV0 355 aa8.18□□□□□ -1.1
CBWD1-219ENST00000611457 DKC1O60832 514 aaKnown RBP eCLIP8.18□□□□□ -1.1
CBWD1-219ENST00000611457 RBM10P98175 930 aaKnown RBP8.18□□□□□ -1.1
CBWD1-219ENST00000611457 RABEP1Q15276 862 aa8.18□□□□□ -1.1
CBWD1-219ENST00000611457 PCYT2Q99447 389 aa8.18□□□□□ -1.1
CBWD1-219ENST00000611457 PLVAPQ9BX97 442 aa8.18□□□□□ -1.1
CBWD1-219ENST00000611457 C6orf50Q9HD87 102 aa8.18□□□□□ -1.1
CBWD1-219ENST00000611457 DBR1Q9UK59 544 aaKnown RBP8.18□□□□□ -1.1
CBWD1-219ENST00000611457 VAV3Q9UKW4 847 aa8.18□□□□□ -1.1
CBWD1-219ENST00000611457 PCDHA6Q9UN73 950 aa8.18□□□□□ -1.1
CBWD1-219ENST00000611457 LZTS1Q9Y250 596 aa8.18□□□□□ -1.1
CBWD1-219ENST00000611457 PCDHA8Q9Y5H6 950 aa8.18□□□□□ -1.1
CBWD1-219ENST00000611457 KAT6AQ92794 2004 aa8.18□□□□□ -1.1
CBWD1-219ENST00000611457 CTDNEP1O95476 244 aa8.18□□□□□ -1.1
CBWD1-219ENST00000611457 ALAS1P13196 640 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms