RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 H0YCG3 227 aa7.97□□□□□ -1.13
CSDE1-218ENST00000610726 IPO5O00410 1097 aaKnown RBP7.97□□□□□ -1.13
CSDE1-218ENST00000610726 ENC1O14682 589 aa7.97□□□□□ -1.13
CSDE1-218ENST00000610726 TUBB4BP68371 445 aa7.97□□□□□ -1.13
CSDE1-218ENST00000610726 RASSF7Q02833 373 aa7.97□□□□□ -1.13
CSDE1-218ENST00000610726 TCP11X2Q5H9J9 407 aa7.97□□□□□ -1.13
CSDE1-218ENST00000610726 DAAM2Q86T65 1068 aa7.97□□□□□ -1.13
CSDE1-218ENST00000610726 SFR1Q86XK3 245 aa7.97□□□□□ -1.13
CSDE1-218ENST00000610726 VGLL2Q8N8G2 317 aa7.97□□□□□ -1.13
CSDE1-218ENST00000610726 ACRBPQ8NEB7 543 aa7.97□□□□□ -1.13
CSDE1-218ENST00000610726 SLC16A10Q8TF71 515 aa7.97□□□□□ -1.13
CSDE1-218ENST00000610726 DYDC2Q96IM9 177 aa7.97□□□□□ -1.13
CSDE1-218ENST00000610726 FAM20AQ96MK3 541 aa7.97□□□□□ -1.13
CSDE1-218ENST00000610726 APOL6Q9BWW8 343 aa7.97□□□□□ -1.13
CSDE1-218ENST00000610726 AGTPBP1Q9UPW5 1226 aa7.97□□□□□ -1.13
CSDE1-218ENST00000610726 AKT3Q9Y243 479 aa7.97□□□□□ -1.13
CSDE1-218ENST00000610726 AFPP02771 609 aaKnown RBP7.97□□□□□ -1.13
CSDE1-218ENST00000610726 CDC25BP30305 580 aa7.97□□□□□ -1.13
CSDE1-218ENST00000610726 SLC8A3P57103 927 aa7.97□□□□□ -1.13
CSDE1-218ENST00000610726 OSTNP61366 133 aa7.97□□□□□ -1.13
CSDE1-218ENST00000610726 PPP1R18Q6NYC8 613 aa7.97□□□□□ -1.13
CSDE1-218ENST00000610726 UBL4BQ8N7F7 174 aa7.97□□□□□ -1.13
CSDE1-218ENST00000610726 CCDC26Q8TAB7 109 aa7.97□□□□□ -1.13
CSDE1-218ENST00000610726 HPS3Q969F9 1004 aa7.97□□□□□ -1.13
CSDE1-218ENST00000610726 ACCSQ96QU6 501 aa7.97□□□□□ -1.13
CSDE1-218ENST00000610726 MMS19Q96T76 1030 aa7.97□□□□□ -1.13
CSDE1-218ENST00000610726 RTFDC1Q9BY42 306 aaPredicted RBP7.97□□□□□ -1.13
CSDE1-218ENST00000610726 GGA3Q9NZ52 723 aa7.97□□□□□ -1.13
CSDE1-218ENST00000610726 PRR12Q9ULL5 1215 aa7.97□□□□□ -1.13
CSDE1-218ENST00000610726 SMIM22K7EJ46 135 aa7.97□□□□□ -1.13
CSDE1-218ENST00000610726 SRGAP2CP0DJJ0 459 aa7.97□□□□□ -1.13
CSDE1-218ENST00000610726 MYL7Q01449 175 aa7.97□□□□□ -1.13
CSDE1-218ENST00000610726 PPARDQ03181 441 aa7.97□□□□□ -1.13
CSDE1-218ENST00000610726 PSMD2Q13200 908 aa7.97□□□□□ -1.13
CSDE1-218ENST00000610726 TRIM58Q8NG06 486 aa7.97□□□□□ -1.13
CSDE1-218ENST00000610726 BBXQ8WY36 941 aaPredicted RBP7.97□□□□□ -1.13
CSDE1-218ENST00000610726 BEGAINQ9BUH8 593 aa7.97□□□□□ -1.13
CSDE1-218ENST00000610726 DEFB129Q9H1M3 183 aa7.97□□□□□ -1.13
CSDE1-218ENST00000610726 JMJD4Q9H9V9 463 aa7.97□□□□□ -1.13
CSDE1-218ENST00000610726 RGL1Q9NZL6 768 aa7.97□□□□□ -1.13
CSDE1-218ENST00000610726 KCNK3O14649 394 aa7.97□□□□□ -1.13
CSDE1-218ENST00000610726 PSAPP07602 524 aa7.97□□□□□ -1.13
CSDE1-218ENST00000610726 FCER1AP12319 257 aa7.97□□□□□ -1.13
CSDE1-218ENST00000610726 YARSP54577 528 aaKnown RBP7.97□□□□□ -1.13
CSDE1-218ENST00000610726 PPP2R5AQ15172 486 aa7.97□□□□□ -1.13
CSDE1-218ENST00000610726 CFAP58Q5T655 872 aa7.97□□□□□ -1.13
CSDE1-218ENST00000610726 NSUN6Q8TEA1 469 aaKnown RBP7.97□□□□□ -1.13
CSDE1-218ENST00000610726 RAD54LQ92698 747 aa7.97□□□□□ -1.13
CSDE1-218ENST00000610726 PPP1R13BQ96KQ4 1090 aa7.97□□□□□ -1.13
CSDE1-218ENST00000610726 TMEM60Q9H2L4 133 aa7.97□□□□□ -1.13
CSDE1-218ENST00000610726 BCL2L12Q9HB09 334 aa7.97□□□□□ -1.13
CSDE1-218ENST00000610726 MYOZ2Q9NPC6 264 aa7.97□□□□□ -1.13
CSDE1-218ENST00000610726 FBXO28Q9NVF7 368 aa7.97□□□□□ -1.13
CSDE1-218ENST00000610726 STXBP3O00186 592 aa7.96□□□□□ -1.13
CSDE1-218ENST00000610726 N4BP1O75113 896 aaKnown RBP7.96□□□□□ -1.13
CSDE1-218ENST00000610726 TUBBP07437 444 aa7.96□□□□□ -1.13
CSDE1-218ENST00000610726 PRELPP51888 382 aa7.96□□□□□ -1.13
CSDE1-218ENST00000610726 CFAP221Q4G0U5 840 aa7.96□□□□□ -1.13
CSDE1-218ENST00000610726 ADAT2Q7Z6V5 191 aaKnown RBP7.96□□□□□ -1.13
CSDE1-218ENST00000610726 SESTD1Q86VW0 696 aa7.96□□□□□ -1.13
CSDE1-218ENST00000610726 SLC35F6Q8N357 371 aa7.96□□□□□ -1.13
CSDE1-218ENST00000610726 FAM133AQ8N9E0 248 aa7.96□□□□□ -1.13
CSDE1-218ENST00000610726 NAP1L3Q99457 506 aaPredicted RBP7.96□□□□□ -1.13
CSDE1-218ENST00000610726 MAK16Q9BXY0 300 aaKnown RBP7.96□□□□□ -1.13
CSDE1-218ENST00000610726 THAP9Q9H5L6 903 aa7.96□□□□□ -1.13
CSDE1-218ENST00000610726 SPTLC3Q9NUV7 552 aa7.96□□□□□ -1.13
CSDE1-218ENST00000610726 FAM184BQ9ULE4 1060 aa7.96□□□□□ -1.13
CSDE1-218ENST00000610726 A0A1W2PRG0 241 aa7.96□□□□□ -1.14
CSDE1-218ENST00000610726 ATP2A1O14983 1001 aa7.96□□□□□ -1.14
CSDE1-218ENST00000610726 LRRC63Q05C16 580 aa7.96□□□□□ -1.14
CSDE1-218ENST00000610726 STXBP2Q15833 593 aa7.96□□□□□ -1.14
CSDE1-218ENST00000610726 CEP55Q53EZ4 464 aa7.96□□□□□ -1.14
CSDE1-218ENST00000610726 PADI6Q6TGC4 694 aa7.96□□□□□ -1.14
CSDE1-218ENST00000610726 ACER1Q8TDN7 264 aa7.96□□□□□ -1.14
CSDE1-218ENST00000610726 UBLCP1Q8WVY7 318 aaPredicted RBP7.96□□□□□ -1.14
CSDE1-218ENST00000610726 PAIP2Q9BPZ3 127 aaKnown RBP7.96□□□□□ -1.14
CSDE1-218ENST00000610726 KCNQ5Q9NR82 932 aa7.96□□□□□ -1.14
CSDE1-218ENST00000610726 GCNT4Q9P109 453 aa7.96□□□□□ -1.14
CSDE1-218ENST00000610726 VPS18Q9P253 973 aa7.96□□□□□ -1.14
CSDE1-218ENST00000610726 MTRF1LQ9UGC7 380 aaKnown RBP7.96□□□□□ -1.14
CSDE1-218ENST00000610726 SHPRHQ149N8 1683 aa7.96□□□□□ -1.14
CSDE1-218ENST00000610726 DDTLA6NHG4 134 aaPredicted RBP7.96□□□□□ -1.14
CSDE1-218ENST00000610726 TEX33O43247 280 aa7.96□□□□□ -1.14
CSDE1-218ENST00000610726 USP11P51784 963 aa7.96□□□□□ -1.14
CSDE1-218ENST00000610726 EHHADHQ08426 723 aa7.96□□□□□ -1.14
CSDE1-218ENST00000610726 TUBB2AQ13885 445 aa7.96□□□□□ -1.14
CSDE1-218ENST00000610726 TAF12Q16514 161 aa7.96□□□□□ -1.14
CSDE1-218ENST00000610726 NLRP4Q96MN2 994 aa7.96□□□□□ -1.14
CSDE1-218ENST00000610726 NT5C1BQ96P26 610 aa7.96□□□□□ -1.14
CSDE1-218ENST00000610726 CCDC77Q9BR77 488 aa7.96□□□□□ -1.14
CSDE1-218ENST00000610726 TUBB2BQ9BVA1 445 aa7.96□□□□□ -1.14
CSDE1-218ENST00000610726 VCPKMTQ9H867 229 aa7.96□□□□□ -1.14
CSDE1-218ENST00000610726 AMFRQ9UKV5 643 aa7.96□□□□□ -1.14
CSDE1-218ENST00000610726 ABT1Q9ULW3 272 aaKnown RBP7.96□□□□□ -1.14
CSDE1-218ENST00000610726 WDR64B1ANS9 1081 aa7.95□□□□□ -1.14
CSDE1-218ENST00000610726 K7ERI5 159 aa7.95□□□□□ -1.14
CSDE1-218ENST00000610726 GFPT2O94808 682 aa7.95□□□□□ -1.14
CSDE1-218ENST00000610726 KIF4AO95239 1232 aa7.95□□□□□ -1.14
CSDE1-218ENST00000610726 MYCP01106 439 aaPredicted RBP7.95□□□□□ -1.14
CSDE1-218ENST00000610726 TNNC2P02585 160 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms