RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 KCNQ2O43526 872 aa15.52■□□□□ 0.07
PCDHB16-201ENST00000609684 PRR29P0C7W0 189 aa15.52■□□□□ 0.07
PCDHB16-201ENST00000609684 EXOSC10Q01780 885 aaKnown RBP15.52■□□□□ 0.07
PCDHB16-201ENST00000609684 DPY19L2Q6NUT2 758 aa15.52■□□□□ 0.07
PCDHB16-201ENST00000609684 CCDC62Q6P9F0 684 aa15.52■□□□□ 0.07
PCDHB16-201ENST00000609684 ARHGEF2Q92974 986 aaKnown RBP15.52■□□□□ 0.07
PCDHB16-201ENST00000609684 FAM84BQ96KN1 310 aaPredicted RBP15.52■□□□□ 0.07
PCDHB16-201ENST00000609684 PARD6BQ9BYG5 372 aa15.52■□□□□ 0.07
PCDHB16-201ENST00000609684 PODXL2Q9NZ53 605 aa15.52■□□□□ 0.07
PCDHB16-201ENST00000609684 PCDHA13Q9Y5I0 950 aa15.52■□□□□ 0.07
PCDHB16-201ENST00000609684 CPS1P31327 1500 aa15.52■□□□□ 0.07
PCDHB16-201ENST00000609684 PTPRUQ92729 1446 aa15.51■□□□□ 0.07
PCDHB16-201ENST00000609684 ZBTB5O15062 677 aa15.51■□□□□ 0.07
PCDHB16-201ENST00000609684 RNF8O76064 485 aa15.51■□□□□ 0.07
PCDHB16-201ENST00000609684 SERPING1P05155 500 aa15.51■□□□□ 0.07
PCDHB16-201ENST00000609684 CRKP46108 304 aa15.51■□□□□ 0.07
PCDHB16-201ENST00000609684 FAM47CQ5HY64 1035 aa15.51■□□□□ 0.07
PCDHB16-201ENST00000609684 VPS52Q8N1B4 723 aa15.51■□□□□ 0.07
PCDHB16-201ENST00000609684 ARHGEF1Q92888 912 aaKnown RBP15.51■□□□□ 0.07
PCDHB16-201ENST00000609684 ZNF609O15014 1411 aa15.51■□□□□ 0.07
PCDHB16-201ENST00000609684 PGRMC1O00264 195 aaKnown RBP15.51■□□□□ 0.07
PCDHB16-201ENST00000609684 ATP8B1O43520 1251 aa15.51■□□□□ 0.07
PCDHB16-201ENST00000609684 EIF2AK2P19525 551 aaKnown RBP15.51■□□□□ 0.07
PCDHB16-201ENST00000609684 UNC13DQ70J99 1090 aa15.51■□□□□ 0.07
PCDHB16-201ENST00000609684 FAM160B2Q86V87 743 aa15.51■□□□□ 0.07
PCDHB16-201ENST00000609684 CCDC13Q8IYE1 715 aa15.51■□□□□ 0.07
PCDHB16-201ENST00000609684 GABPB2Q8TAK5 448 aaPredicted RBP15.51■□□□□ 0.07
PCDHB16-201ENST00000609684 TYW1Q9NV66 732 aaKnown RBP15.51■□□□□ 0.07
PCDHB16-201ENST00000609684 UTYO14607 1347 aa15.51■□□□□ 0.07
PCDHB16-201ENST00000609684 FAM196BA6NMK8 535 aa15.51■□□□□ 0.07
PCDHB16-201ENST00000609684 APBA1Q02410 837 aa15.51■□□□□ 0.07
PCDHB16-201ENST00000609684 CACNA2D3Q8IZS8 1091 aa15.51■□□□□ 0.07
PCDHB16-201ENST00000609684 TBC1D31Q96DN5 1066 aa15.51■□□□□ 0.07
PCDHB16-201ENST00000609684 DLC1Q96QB1 1528 aa15.51■□□□□ 0.07
PCDHB16-201ENST00000609684 MROH7-TTC4A0A0A0MT08 1334 aa15.51■□□□□ 0.07
PCDHB16-201ENST00000609684 CCDC151A5D8V7 595 aa15.51■□□□□ 0.07
PCDHB16-201ENST00000609684 MXI1P50539 228 aa15.51■□□□□ 0.07
PCDHB16-201ENST00000609684 EPHB4P54760 987 aa15.51■□□□□ 0.07
PCDHB16-201ENST00000609684 ANKRD20A3Q5VUR7 823 aa15.51■□□□□ 0.07
PCDHB16-201ENST00000609684 NACA2Q9H009 215 aa15.51■□□□□ 0.07
PCDHB16-201ENST00000609684 UBE2TQ9NPD8 197 aaPredicted RBP15.51■□□□□ 0.07
PCDHB16-201ENST00000609684 INO80B-WBP1J3KQ70 363 aa15.5■□□□□ 0.07
PCDHB16-201ENST00000609684 DDIT3P35638 169 aa15.5■□□□□ 0.07
PCDHB16-201ENST00000609684 AP3B2Q13367 1082 aa15.5■□□□□ 0.07
PCDHB16-201ENST00000609684 CCDC144BQ3MJ40 725 aa15.5■□□□□ 0.07
PCDHB16-201ENST00000609684 SPATA24Q86W54 205 aa15.5■□□□□ 0.07
PCDHB16-201ENST00000609684 INO80BQ9C086 356 aaPredicted RBP15.5■□□□□ 0.07
PCDHB16-201ENST00000609684 USP17L15C9J2P7 530 aa15.5■□□□□ 0.07
PCDHB16-201ENST00000609684 USP17L13C9JLJ4 530 aa15.5■□□□□ 0.07
PCDHB16-201ENST00000609684 USP17L11C9JVI0 530 aa15.5■□□□□ 0.07
PCDHB16-201ENST00000609684 USP17L18D6R9N7 530 aa15.5■□□□□ 0.07
PCDHB16-201ENST00000609684 USP17L22D6RA61 530 aa15.5■□□□□ 0.07
PCDHB16-201ENST00000609684 USP17L17D6RBQ6 530 aa15.5■□□□□ 0.07
PCDHB16-201ENST00000609684 USP17L19D6RCP7 530 aa15.5■□□□□ 0.07
PCDHB16-201ENST00000609684 USP17L20D6RJB6 530 aa15.5■□□□□ 0.07
PCDHB16-201ENST00000609684 CRCPO75575 148 aa15.5■□□□□ 0.07
PCDHB16-201ENST00000609684 HOXA7P31268 230 aaPredicted RBP15.5■□□□□ 0.07
PCDHB16-201ENST00000609684 PHBP35232 272 aa15.5■□□□□ 0.07
PCDHB16-201ENST00000609684 USP17L24Q0WX57 530 aa15.5■□□□□ 0.07
PCDHB16-201ENST00000609684 GRM4Q14833 912 aa15.5■□□□□ 0.07
PCDHB16-201ENST00000609684 LLGL1Q15334 1064 aa15.5■□□□□ 0.07
PCDHB16-201ENST00000609684 USP17L6PQ6QN14 398 aa15.5■□□□□ 0.07
PCDHB16-201ENST00000609684 BPIFA3Q9BQP9 254 aa15.5■□□□□ 0.07
PCDHB16-201ENST00000609684 RIOK1Q9BRS2 568 aaKnown RBP15.5■□□□□ 0.07
PCDHB16-201ENST00000609684 ADAMTS1Q9UHI8 967 aa15.5■□□□□ 0.07
PCDHB16-201ENST00000609684 PNPLA7Q6ZV29 1317 aa15.5■□□□□ 0.07
PCDHB16-201ENST00000609684 CLCN6P51797 869 aa15.5■□□□□ 0.07
PCDHB16-201ENST00000609684 TTC19Q6DKK2 380 aaPredicted RBP15.5■□□□□ 0.07
PCDHB16-201ENST00000609684 SHC4Q6S5L8 630 aa15.5■□□□□ 0.07
PCDHB16-201ENST00000609684 TOGARAM2Q6ZUX3 1019 aa15.5■□□□□ 0.07
PCDHB16-201ENST00000609684 PDLIM2Q96JY6 352 aa15.5■□□□□ 0.07
PCDHB16-201ENST00000609684 MED10Q9BTT4 135 aa15.5■□□□□ 0.07
PCDHB16-201ENST00000609684 SFI1A8K8P3 1242 aa15.5■□□□□ 0.07
PCDHB16-201ENST00000609684 MAPK4P31152 587 aa15.5■□□□□ 0.07
PCDHB16-201ENST00000609684 PRCPP42785 496 aa15.5■□□□□ 0.07
PCDHB16-201ENST00000609684 TFDP1Q14186 410 aa15.5■□□□□ 0.07
PCDHB16-201ENST00000609684 MIS18BP1Q6P0N0 1132 aa15.5■□□□□ 0.07
PCDHB16-201ENST00000609684 TRIM50Q86XT4 487 aa15.5■□□□□ 0.07
PCDHB16-201ENST00000609684 DCAF4Q8WV16 495 aa15.5■□□□□ 0.07
PCDHB16-201ENST00000609684 CDHR1Q96JP9 859 aa15.5■□□□□ 0.07
PCDHB16-201ENST00000609684 MIS12Q9H081 205 aa15.5■□□□□ 0.07
PCDHB16-201ENST00000609684 DAAM1Q9Y4D1 1078 aa15.5■□□□□ 0.07
PCDHB16-201ENST00000609684 CAPN9O14815 690 aa15.49■□□□□ 0.07
PCDHB16-201ENST00000609684 RXRBP28702 533 aa15.49■□□□□ 0.07
PCDHB16-201ENST00000609684 PPP4R3CPQ6ZMV5 832 aa15.49■□□□□ 0.07
PCDHB16-201ENST00000609684 SESTD1Q86VW0 696 aa15.49■□□□□ 0.07
PCDHB16-201ENST00000609684 CCT6BQ92526 530 aa15.49■□□□□ 0.07
PCDHB16-201ENST00000609684 PLA2G12BQ9BX93 195 aa15.49■□□□□ 0.07
PCDHB16-201ENST00000609684 NEXMIFQ5QGS0 1516 aa15.49■□□□□ 0.07
PCDHB16-201ENST00000609684 MAN1A1P33908 653 aa15.49■□□□□ 0.07
PCDHB16-201ENST00000609684 MTERF2Q49AM1 385 aa15.49■□□□□ 0.07
PCDHB16-201ENST00000609684 ZNF772Q68DY9 489 aaPredicted RBP15.49■□□□□ 0.07
PCDHB16-201ENST00000609684 C1orf167Q5SNV9 1468 aa15.49■□□□□ 0.07
PCDHB16-201ENST00000609684 LGALS16A8MUM7 142 aa15.49■□□□□ 0.07
PCDHB16-201ENST00000609684 CCND2P30279 289 aa15.49■□□□□ 0.07
PCDHB16-201ENST00000609684 SDCCAG8Q86SQ7 713 aaPredicted RBP15.49■□□□□ 0.07
PCDHB16-201ENST00000609684 PIGOQ8TEQ8 1089 aa15.49■□□□□ 0.07
PCDHB16-201ENST00000609684 NSMCE1Q8WV22 266 aa15.49■□□□□ 0.07
PCDHB16-201ENST00000609684 FAM114A2Q9NRY5 505 aa15.49■□□□□ 0.07
PCDHB16-201ENST00000609684 PCDHA6Q9UN73 950 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms