RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 REXO1Q8N1G1 1221 aaKnown RBP24.6■■□□□ 1.53
SHANK2-220ENST00000608988 TBCKQ8TEA7 893 aa24.6■■□□□ 1.53
SHANK2-220ENST00000608988 TANGO6Q9C0B7 1094 aa24.6■■□□□ 1.53
SHANK2-220ENST00000608988 RABEP2Q9H5N1 569 aa24.6■■□□□ 1.53
SHANK2-220ENST00000608988 SLAIN2Q9P270 581 aa24.6■■□□□ 1.53
SHANK2-220ENST00000608988 TLR2O60603 784 aa24.59■■□□□ 1.53
SHANK2-220ENST00000608988 NOL4O94818 638 aa24.59■■□□□ 1.53
SHANK2-220ENST00000608988 GSTO1P78417 241 aa24.59■■□□□ 1.53
SHANK2-220ENST00000608988 GUCY1A3Q02108 690 aa24.59■■□□□ 1.53
SHANK2-220ENST00000608988 C6orf89Q6UWU4 347 aa24.59■■□□□ 1.53
SHANK2-220ENST00000608988 ARMC9Q7Z3E5 817 aa24.59■■□□□ 1.53
SHANK2-220ENST00000608988 TAX1BP1Q86VP1 789 aa24.59■■□□□ 1.53
SHANK2-220ENST00000608988 DZIP1Q86YF9 867 aaKnown RBP24.59■■□□□ 1.53
SHANK2-220ENST00000608988 PLAAQ9Y263 795 aa24.59■■□□□ 1.53
SHANK2-220ENST00000608988 GCOM1H8Y6P7 765 aaPredicted RBP24.58■■□□□ 1.53
SHANK2-220ENST00000608988 MYZAPP0CAP1 466 aa24.58■■□□□ 1.53
SHANK2-220ENST00000608988 PRDX5P30044 214 aa24.58■■□□□ 1.53
SHANK2-220ENST00000608988 ATP6V1AP38606 617 aa24.58■■□□□ 1.53
SHANK2-220ENST00000608988 CCDC40Q4G0X9 1142 aa24.58■■□□□ 1.53
SHANK2-220ENST00000608988 AGBL2Q5U5Z8 902 aa24.58■■□□□ 1.53
SHANK2-220ENST00000608988 ACTRT1Q8TDG2 376 aa24.58■■□□□ 1.53
SHANK2-220ENST00000608988 LSM14BQ9BX40 385 aaKnown RBP24.58■■□□□ 1.53
SHANK2-220ENST00000608988 BTG4Q9NY30 223 aa24.58■■□□□ 1.53
SHANK2-220ENST00000608988 GUCY2FP51841 1108 aa24.58■■□□□ 1.52
SHANK2-220ENST00000608988 ERFEQ4G0M1 354 aa24.58■■□□□ 1.52
SHANK2-220ENST00000608988 KRT79Q5XKE5 535 aa24.58■■□□□ 1.52
SHANK2-220ENST00000608988 MAATS1Q7Z4T9 603 aa24.58■■□□□ 1.52
SHANK2-220ENST00000608988 P3H4Q92791 437 aa24.58■■□□□ 1.52
SHANK2-220ENST00000608988 BZW2Q9Y6E2 419 aaKnown RBP24.58■■□□□ 1.52
SHANK2-220ENST00000608988 NAV1Q8NEY1 1877 aa24.57■■□□□ 1.52
SHANK2-220ENST00000608988 USP17L3A6NCW0 530 aa24.57■■□□□ 1.52
SHANK2-220ENST00000608988 USP17L4A6NCW7 530 aa24.57■■□□□ 1.52
SHANK2-220ENST00000608988 CHUKO15111 745 aa24.57■■□□□ 1.52
SHANK2-220ENST00000608988 RAD51CO43502 376 aa24.57■■□□□ 1.52
SHANK2-220ENST00000608988 KLRC1P26715 233 aa24.57■■□□□ 1.52
SHANK2-220ENST00000608988 TXKP42681 527 aa24.57■■□□□ 1.52
SHANK2-220ENST00000608988 RPS6KA1Q15418 735 aa24.57■■□□□ 1.52
SHANK2-220ENST00000608988 CEP85LQ5SZL2 805 aa24.57■■□□□ 1.52
SHANK2-220ENST00000608988 USP17L1Q7RTZ2 530 aa24.57■■□□□ 1.52
SHANK2-220ENST00000608988 DDX12PQ92771 950 aa24.57■■□□□ 1.52
SHANK2-220ENST00000608988 CCDC188H7C350 402 aa24.56■■□□□ 1.52
SHANK2-220ENST00000608988 FTCDO95954 541 aa24.56■■□□□ 1.52
SHANK2-220ENST00000608988 PPP4CP60510 307 aa24.56■■□□□ 1.52
SHANK2-220ENST00000608988 ASIC2Q16515 512 aa24.56■■□□□ 1.52
SHANK2-220ENST00000608988 TRIM59Q8IWR1 403 aa24.56■■□□□ 1.52
SHANK2-220ENST00000608988 ZC3H3Q8IXZ2 948 aaKnown RBP24.56■■□□□ 1.52
SHANK2-220ENST00000608988 SCFD2Q8WU76 684 aa24.56■■□□□ 1.52
SHANK2-220ENST00000608988 GOLGA6L7A0A1B0GV03 622 aa24.55■■□□□ 1.52
SHANK2-220ENST00000608988 WTIPA6NIX2 430 aaPredicted RBP24.55■■□□□ 1.52
SHANK2-220ENST00000608988 BAG3O95817 575 aa24.55■■□□□ 1.52
SHANK2-220ENST00000608988 PAEPP09466 180 aa24.55■■□□□ 1.52
SHANK2-220ENST00000608988 MAP2K2P36507 400 aa24.55■■□□□ 1.52
SHANK2-220ENST00000608988 USP11P51784 963 aa24.55■■□□□ 1.52
SHANK2-220ENST00000608988 KIAA0753Q2KHM9 967 aa24.55■■□□□ 1.52
SHANK2-220ENST00000608988 CCDC50Q8IVM0 306 aa24.55■■□□□ 1.52
SHANK2-220ENST00000608988 TBC1D5Q92609 795 aa24.55■■□□□ 1.52
SHANK2-220ENST00000608988 LOC102724428A0A0B4J2F2 783 aa24.55■■□□□ 1.52
SHANK2-220ENST00000608988 ESYT3A0FGR9 886 aa24.55■■□□□ 1.52
SHANK2-220ENST00000608988 SIK1P57059 783 aa24.55■■□□□ 1.52
SHANK2-220ENST00000608988 POLR2FP61218 127 aaKnown RBP24.55■■□□□ 1.52
SHANK2-220ENST00000608988 KLHL30Q0D2K2 578 aa24.55■■□□□ 1.52
SHANK2-220ENST00000608988 PPP4R3CPQ6ZMV5 832 aa24.55■■□□□ 1.52
SHANK2-220ENST00000608988 DYMQ7RTS9 669 aa24.55■■□□□ 1.52
SHANK2-220ENST00000608988 DYNLL2Q96FJ2 89 aa24.55■■□□□ 1.52
SHANK2-220ENST00000608988 NLRC4Q9NPP4 1024 aa24.55■■□□□ 1.52
SHANK2-220ENST00000608988 BMP2KQ9NSY1 1161 aaPredicted RBP24.55■■□□□ 1.52
SHANK2-220ENST00000608988 KIF13BQ9NQT8 1826 aa24.54■■□□□ 1.52
SHANK2-220ENST00000608988 GMNCA6NCL1 334 aa24.54■■□□□ 1.52
SHANK2-220ENST00000608988 ZSCAN5CA6NGD5 496 aaPredicted RBP24.54■■□□□ 1.52
SHANK2-220ENST00000608988 H0YGN5 161 aa24.54■■□□□ 1.52
SHANK2-220ENST00000608988 TRAF5O00463 557 aa24.54■■□□□ 1.52
SHANK2-220ENST00000608988 RASA1P20936 1047 aa24.54■■□□□ 1.52
SHANK2-220ENST00000608988 COASYQ13057 564 aa24.54■■□□□ 1.52
SHANK2-220ENST00000608988 SPDYCQ5MJ68 293 aa24.54■■□□□ 1.52
SHANK2-220ENST00000608988 SNX29Q8TEQ0 813 aa24.54■■□□□ 1.52
SHANK2-220ENST00000608988 CDCA7Q9BWT1 371 aaPredicted RBP24.54■■□□□ 1.52
SHANK2-220ENST00000608988 STX8Q9UNK0 236 aa24.54■■□□□ 1.52
SHANK2-220ENST00000608988 UTP18Q9Y5J1 556 aaKnown RBP eCLIP24.54■■□□□ 1.525e-6■□□□□ 8.4
SHANK2-220ENST00000608988 NFS1Q9Y697 457 aa24.54■■□□□ 1.52
SHANK2-220ENST00000608988 TNRC6CQ9HCJ0 1690 aaKnown RBP24.54■■□□□ 1.52
SHANK2-220ENST00000608988 E7EVH7 732 aa24.53■■□□□ 1.52
SHANK2-220ENST00000608988 KIF4AO95239 1232 aa24.53■■□□□ 1.52
SHANK2-220ENST00000608988 HSD17B3P37058 310 aa24.53■■□□□ 1.52
SHANK2-220ENST00000608988 RPS8P62241 208 aaKnown RBP24.53■■□□□ 1.52
SHANK2-220ENST00000608988 FAM26FQ5R3K3 315 aa24.53■■□□□ 1.52
SHANK2-220ENST00000608988 RNF187Q5TA31 235 aaPredicted RBP24.53■■□□□ 1.52
SHANK2-220ENST00000608988 C3orf67Q6ZVT6 689 aa24.53■■□□□ 1.52
SHANK2-220ENST00000608988 WDR66Q8TBY9 1149 aa24.53■■□□□ 1.52
SHANK2-220ENST00000608988 CYFIP2Q96F07 1278 aa24.53■■□□□ 1.52
SHANK2-220ENST00000608988 MYO1FO00160 1098 aa24.53■■□□□ 1.52
SHANK2-220ENST00000608988 RASSF9O75901 435 aa24.53■■□□□ 1.52
SHANK2-220ENST00000608988 HDLBPQ00341 1268 aaKnown RBP24.53■■□□□ 1.52
SHANK2-220ENST00000608988 HYIQ5T013 277 aa24.53■■□□□ 1.52
SHANK2-220ENST00000608988 PPP1R18Q6NYC8 613 aa24.53■■□□□ 1.52
SHANK2-220ENST00000608988 CCDC121Q6ZUS5 278 aa24.53■■□□□ 1.52
SHANK2-220ENST00000608988 TMC4Q7Z404 712 aa24.53■■□□□ 1.52
SHANK2-220ENST00000608988 NEDD1Q8NHV4 660 aa24.53■■□□□ 1.52
SHANK2-220ENST00000608988 CELF1Q92879 486 aaKnown RBP24.53■■□□□ 1.52
SHANK2-220ENST00000608988 DNAJC19Q96DA6 116 aa24.53■■□□□ 1.52
SHANK2-220ENST00000608988 GANQ9H2C0 597 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms