RNA–Protein interactions for RNA: ENST00000608720.5

CTCFL-219, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,241 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-219ENST00000608720 TDRD12Q587J7 1177 aaKnown RBP16.17■□□□□ 0.18
CTCFL-219ENST00000608720 KCNK18Q7Z418 384 aa16.17■□□□□ 0.18
CTCFL-219ENST00000608720 DNAJC19Q96DA6 116 aa16.17■□□□□ 0.18
CTCFL-219ENST00000608720 GJD4Q96KN9 370 aaPredicted RBP16.17■□□□□ 0.18
CTCFL-219ENST00000608720 GPR101Q96P66 508 aaPredicted RBP16.17■□□□□ 0.18
CTCFL-219ENST00000608720 NAV1Q8NEY1 1877 aa16.16■□□□□ 0.18
CTCFL-219ENST00000608720 TRAF5O00463 557 aa16.16■□□□□ 0.18
CTCFL-219ENST00000608720 EPB41P11171 864 aaKnown RBP16.16■□□□□ 0.18
CTCFL-219ENST00000608720 CXCR5P32302 372 aa16.16■□□□□ 0.18
CTCFL-219ENST00000608720 MAP2K2P36507 400 aa16.16■□□□□ 0.18
CTCFL-219ENST00000608720 SLC1A4P43007 532 aa16.16■□□□□ 0.18
CTCFL-219ENST00000608720 NAP1L1P55209 391 aaKnown RBP16.16■□□□□ 0.18
CTCFL-219ENST00000608720 GPSM2P81274 684 aa16.16■□□□□ 0.18
CTCFL-219ENST00000608720 SLC7A5Q01650 507 aa16.16■□□□□ 0.18
CTCFL-219ENST00000608720 FAM83BQ5T0W9 1011 aa16.16■□□□□ 0.18
CTCFL-219ENST00000608720 C8orf74Q6P047 294 aa16.16■□□□□ 0.18
CTCFL-219ENST00000608720 ANKRD13CQ8N6S4 541 aa16.16■□□□□ 0.18
CTCFL-219ENST00000608720 MTMR8Q96EF0 704 aa16.16■□□□□ 0.18
CTCFL-219ENST00000608720 PANK4Q9NVE7 773 aa16.16■□□□□ 0.18
CTCFL-219ENST00000608720 PLIN4Q96Q06 1357 aa16.16■□□□□ 0.18
CTCFL-219ENST00000608720 GAKO14976 1311 aa16.16■□□□□ 0.18
CTCFL-219ENST00000608720 PNMA6FA0A0J9YX94 578 aa16.15■□□□□ 0.18
CTCFL-219ENST00000608720 NCK2O43639 380 aa16.15■□□□□ 0.18
CTCFL-219ENST00000608720 TNNI2P48788 182 aa16.15■□□□□ 0.18
CTCFL-219ENST00000608720 ATP2B2Q01814 1243 aa16.15■□□□□ 0.18
CTCFL-219ENST00000608720 FAM26FQ5R3K3 315 aa16.15■□□□□ 0.18
CTCFL-219ENST00000608720 SLC51AQ86UW1 340 aa16.15■□□□□ 0.18
CTCFL-219ENST00000608720 MICALL1Q8N3F8 863 aa16.15■□□□□ 0.18
CTCFL-219ENST00000608720 GPATCH11Q8N954 259 aa16.15■□□□□ 0.18
CTCFL-219ENST00000608720 GLIS3Q8NEA6 775 aa16.15■□□□□ 0.18
CTCFL-219ENST00000608720 PSMB7Q99436 277 aa16.15■□□□□ 0.18
CTCFL-219ENST00000608720 HINFPQ9BQA5 517 aa16.15■□□□□ 0.18
CTCFL-219ENST00000608720 NT5C3AQ9H0P0 336 aa16.15■□□□□ 0.18
CTCFL-219ENST00000608720 DDX25Q9UHL0 483 aaKnown RBP16.15■□□□□ 0.18
CTCFL-219ENST00000608720 MARCH6O60337 910 aa16.15■□□□□ 0.18
CTCFL-219ENST00000608720 HSF2BPO75031 334 aa16.15■□□□□ 0.18
CTCFL-219ENST00000608720 UFL1O94874 794 aa16.15■□□□□ 0.18
CTCFL-219ENST00000608720 GCFC2P16383 781 aaKnown RBP16.15■□□□□ 0.18
CTCFL-219ENST00000608720 HYIQ5T013 277 aa16.15■□□□□ 0.18
CTCFL-219ENST00000608720 IFT20Q8IY31 132 aa16.15■□□□□ 0.18
CTCFL-219ENST00000608720 TBC1D22AQ8WUA7 517 aa16.15■□□□□ 0.18
CTCFL-219ENST00000608720 NAP1L4Q99733 375 aaKnown RBP16.15■□□□□ 0.18
CTCFL-219ENST00000608720 TRPC5Q9UL62 973 aaPredicted RBP16.15■□□□□ 0.18
CTCFL-219ENST00000608720 KDM3AQ9Y4C1 1321 aa16.15■□□□□ 0.18
CTCFL-219ENST00000608720 A6NNZ2 444 aa16.14■□□□□ 0.17
CTCFL-219ENST00000608720 BUB1O43683 1085 aa16.14■□□□□ 0.17
CTCFL-219ENST00000608720 NOL4O94818 638 aa16.14■□□□□ 0.17
CTCFL-219ENST00000608720 CLSTN1O94985 981 aa16.14■□□□□ 0.17
CTCFL-219ENST00000608720 RFC4P35249 363 aa16.14■□□□□ 0.17
CTCFL-219ENST00000608720 IRAK1P51617 712 aa16.14■□□□□ 0.17
CTCFL-219ENST00000608720 MRPL12P52815 198 aaKnown RBP16.14■□□□□ 0.17
CTCFL-219ENST00000608720 MARSP56192 900 aaKnown RBP16.14■□□□□ 0.17
CTCFL-219ENST00000608720 NAB2Q15742 525 aa16.14■□□□□ 0.17
CTCFL-219ENST00000608720 ECM1Q16610 540 aa16.14■□□□□ 0.17
CTCFL-219ENST00000608720 TUBB8Q3ZCM7 444 aa16.14■□□□□ 0.17
CTCFL-219ENST00000608720 ZNF772Q68DY9 489 aaPredicted RBP16.14■□□□□ 0.17
CTCFL-219ENST00000608720 CCDC65Q8IXS2 484 aa16.14■□□□□ 0.17
CTCFL-219ENST00000608720 CNBD1Q8NA66 436 aa16.14■□□□□ 0.17
CTCFL-219ENST00000608720 HAS1Q92839 578 aa16.14■□□□□ 0.17
CTCFL-219ENST00000608720 RUFY1Q96T51 708 aa16.14■□□□□ 0.17
CTCFL-219ENST00000608720 LSM14BQ9BX40 385 aaKnown RBP16.14■□□□□ 0.17
CTCFL-219ENST00000608720 NLRC4Q9NPP4 1024 aa16.14■□□□□ 0.17
CTCFL-219ENST00000608720 RBM12Q9NTZ6 932 aaKnown RBP16.14■□□□□ 0.17
CTCFL-219ENST00000608720 SMARCAL1Q9NZC9 954 aa16.14■□□□□ 0.17
CTCFL-219ENST00000608720 GGA1Q9UJY5 639 aa16.14■□□□□ 0.17
CTCFL-219ENST00000608720 CCNL1Q9UK58 526 aaPredicted RBP16.14■□□□□ 0.17
CTCFL-219ENST00000608720 ATP6V0A2Q9Y487 856 aa16.14■□□□□ 0.17
CTCFL-219ENST00000608720 MYH1P12882 1939 aa16.14■□□□□ 0.17
CTCFL-219ENST00000608720 SLC26A4O43511 780 aa16.14■□□□□ 0.17
CTCFL-219ENST00000608720 CLK2P49760 499 aaKnown RBP16.14■□□□□ 0.17
CTCFL-219ENST00000608720 MFSD14BQ5SR56 506 aa16.14■□□□□ 0.17
CTCFL-219ENST00000608720 PTF1AQ7RTS3 328 aa16.14■□□□□ 0.17
CTCFL-219ENST00000608720 RPGRQ92834 1020 aaKnown RBP16.14■□□□□ 0.17
CTCFL-219ENST00000608720 CUL5Q93034 780 aa16.14■□□□□ 0.17
CTCFL-219ENST00000608720 CAPS2Q9BXY5 557 aa16.14■□□□□ 0.17
CTCFL-219ENST00000608720 JMJD4Q9H9V9 463 aa16.14■□□□□ 0.17
CTCFL-219ENST00000608720 GPCPD1Q9NPB8 672 aa16.14■□□□□ 0.17
CTCFL-219ENST00000608720 PCDHA12Q9UN75 941 aa16.14■□□□□ 0.17
CTCFL-219ENST00000608720 IGKV6D-41A0A0C4DH26 115 aa16.13■□□□□ 0.17
CTCFL-219ENST00000608720 GRID2IPA4D2P6 1211 aa16.13■□□□□ 0.17
CTCFL-219ENST00000608720 TLR2O60603 784 aa16.13■□□□□ 0.17
CTCFL-219ENST00000608720 ERCC3P19447 782 aa16.13■□□□□ 0.17
CTCFL-219ENST00000608720 RXRBP28702 533 aa16.13■□□□□ 0.17
CTCFL-219ENST00000608720 GPIHBP1Q8IV16 184 aa16.13■□□□□ 0.17
CTCFL-219ENST00000608720 LRRC47Q8N1G4 583 aaKnown RBP16.13■□□□□ 0.17
CTCFL-219ENST00000608720 EHD2Q9NZN4 543 aa16.13■□□□□ 0.17
CTCFL-219ENST00000608720 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.13■□□□□ 0.17
CTCFL-219ENST00000608720 HNRNPH1P31943 449 aaKnown RBP16.13■□□□□ 0.17
CTCFL-219ENST00000608720 POLR2FP61218 127 aaKnown RBP16.13■□□□□ 0.17
CTCFL-219ENST00000608720 MRPS25P82663 173 aaKnown RBP16.13■□□□□ 0.17
CTCFL-219ENST00000608720 GABPAQ06546 454 aa16.13■□□□□ 0.17
CTCFL-219ENST00000608720 ZNF543Q08ER8 600 aa16.13■□□□□ 0.17
CTCFL-219ENST00000608720 VPS72Q15906 364 aa16.13■□□□□ 0.17
CTCFL-219ENST00000608720 SLC18A3Q16572 532 aa16.13■□□□□ 0.17
CTCFL-219ENST00000608720 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.13■□□□□ 0.17
CTCFL-219ENST00000608720 TRIM59Q8IWR1 403 aa16.13■□□□□ 0.17
CTCFL-219ENST00000608720 ADGRF4Q8IZF3 695 aa16.13■□□□□ 0.17
CTCFL-219ENST00000608720 CNPY4Q8N129 248 aa16.13■□□□□ 0.17
CTCFL-219ENST00000608720 GDF3Q9NR23 364 aa16.13■□□□□ 0.17
CTCFL-219ENST00000608720 DDX60LQ5H9U9 1706 aaKnown RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms