RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 PAGR1Q9BTK6 254 aa24.14■■□□□ 1.45
USP6NL-204ENST00000606752 HSD3B7Q9H2F3 369 aa24.14■■□□□ 1.45
USP6NL-204ENST00000606752 AGO4Q9HCK5 861 aaKnown RBP24.14■■□□□ 1.45
USP6NL-204ENST00000606752 PVALEFA0A1B0GWK0 134 aa24.13■■□□□ 1.45
USP6NL-204ENST00000606752 E9PMD0 336 aa24.13■■□□□ 1.45
USP6NL-204ENST00000606752 ANKRD35Q8N283 1001 aa24.13■■□□□ 1.45
USP6NL-204ENST00000606752 DNM3Q9UQ16 869 aa24.13■■□□□ 1.45
USP6NL-204ENST00000606752 PFASO15067 1338 aa24.13■■□□□ 1.45
USP6NL-204ENST00000606752 POTEFA5A3E0 1075 aa24.12■■□□□ 1.45
USP6NL-204ENST00000606752 SLC25A27O95847 323 aa24.12■■□□□ 1.45
USP6NL-204ENST00000606752 PLA2G4BP0C869 781 aa24.12■■□□□ 1.45
USP6NL-204ENST00000606752 CETPP11597 493 aa24.12■■□□□ 1.45
USP6NL-204ENST00000606752 GTF2A2P52657 109 aa24.12■■□□□ 1.45
USP6NL-204ENST00000606752 POTEGQ6S5H5 508 aa24.12■■□□□ 1.45
USP6NL-204ENST00000606752 DDX12PQ92771 950 aa24.12■■□□□ 1.45
USP6NL-204ENST00000606752 MS4A4AQ96JQ5 239 aa24.12■■□□□ 1.45
USP6NL-204ENST00000606752 MED15Q96RN5 788 aa24.12■■□□□ 1.45
USP6NL-204ENST00000606752 MOV10L1Q9BXT6 1211 aaKnown RBP24.12■■□□□ 1.45
USP6NL-204ENST00000606752 UNC45AQ9H3U1 944 aa24.12■■□□□ 1.45
USP6NL-204ENST00000606752 TUFT1Q9NNX1 390 aa24.12■■□□□ 1.45
USP6NL-204ENST00000606752 EXOC1Q9NV70 894 aa24.12■■□□□ 1.45
USP6NL-204ENST00000606752 RBPJLQ9UBG7 517 aa24.12■■□□□ 1.45
USP6NL-204ENST00000606752 A0A0G2JMZ2 1700 aa24.12■■□□□ 1.45
USP6NL-204ENST00000606752 CHMP2AO43633 222 aa24.12■■□□□ 1.45
USP6NL-204ENST00000606752 PDE4DQ08499 809 aa24.12■■□□□ 1.45
USP6NL-204ENST00000606752 KLHL10Q6JEL2 608 aa24.12■■□□□ 1.45
USP6NL-204ENST00000606752 NCAPG2Q86XI2 1143 aa24.12■■□□□ 1.45
USP6NL-204ENST00000606752 GIMAP8Q8ND71 665 aaPredicted RBP24.12■■□□□ 1.45
USP6NL-204ENST00000606752 DNERQ8NFT8 737 aa24.12■■□□□ 1.45
USP6NL-204ENST00000606752 BMP2KQ9NSY1 1161 aaPredicted RBP24.12■■□□□ 1.45
USP6NL-204ENST00000606752 TBC1D22BQ9NU19 505 aa24.12■■□□□ 1.45
USP6NL-204ENST00000606752 FANCLQ9NW38 375 aa24.12■■□□□ 1.45
USP6NL-204ENST00000606752 PNMA3Q9UL41 463 aa24.12■■□□□ 1.45
USP6NL-204ENST00000606752 GDAQ9Y2T3 454 aa24.12■■□□□ 1.45
USP6NL-204ENST00000606752 MAFGO15525 162 aa24.11■■□□□ 1.45
USP6NL-204ENST00000606752 DHX15O43143 795 aaKnown RBP24.11■■□□□ 1.45
USP6NL-204ENST00000606752 MUTP22033 750 aa24.11■■□□□ 1.45
USP6NL-204ENST00000606752 COPB2P35606 906 aa24.11■■□□□ 1.45
USP6NL-204ENST00000606752 EPHA7Q15375 998 aa24.11■■□□□ 1.45
USP6NL-204ENST00000606752 UNC13DQ70J99 1090 aa24.11■■□□□ 1.45
USP6NL-204ENST00000606752 ZNF526Q8TF50 670 aaPredicted RBP24.11■■□□□ 1.45
USP6NL-204ENST00000606752 RGL1Q9NZL6 768 aa24.11■■□□□ 1.45
USP6NL-204ENST00000606752 NFE2L3Q9Y4A8 694 aa24.11■■□□□ 1.45
USP6NL-204ENST00000606752 TESPA1A2RU30 521 aaPredicted RBP24.1■■□□□ 1.45
USP6NL-204ENST00000606752 STAM2O75886 525 aa24.1■■□□□ 1.45
USP6NL-204ENST00000606752 SLITRK3O94933 977 aa24.1■■□□□ 1.45
USP6NL-204ENST00000606752 PRCPP42785 496 aa24.1■■□□□ 1.45
USP6NL-204ENST00000606752 CYP4A11Q02928 519 aa24.1■■□□□ 1.45
USP6NL-204ENST00000606752 HS1BP3Q53T59 392 aa24.1■■□□□ 1.45
USP6NL-204ENST00000606752 DYMQ7RTS9 669 aa24.1■■□□□ 1.45
USP6NL-204ENST00000606752 TRMT44Q8IYL2 757 aaKnown RBP24.1■■□□□ 1.45
USP6NL-204ENST00000606752 GPRASP2Q96D09 838 aa24.1■■□□□ 1.45
USP6NL-204ENST00000606752 IWS1Q96ST2 819 aa24.1■■□□□ 1.45
USP6NL-204ENST00000606752 TXNRD2Q9NNW7 524 aa24.1■■□□□ 1.45
USP6NL-204ENST00000606752 ITGBL1O95965 494 aaPredicted RBP24.1■■□□□ 1.45
USP6NL-204ENST00000606752 SSBP05455 408 aaKnown RBP eCLIP24.1■■□□□ 1.45
USP6NL-204ENST00000606752 ITGB3BPQ13352 177 aaPredicted RBP24.1■■□□□ 1.45
USP6NL-204ENST00000606752 SPATA1Q5VX52 437 aa24.1■■□□□ 1.45
USP6NL-204ENST00000606752 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.1■■□□□ 1.45
USP6NL-204ENST00000606752 NLRX1Q86UT6 975 aa24.1■■□□□ 1.45
USP6NL-204ENST00000606752 ADSSL1Q8N142 457 aa24.1■■□□□ 1.45
USP6NL-204ENST00000606752 GTF3C2Q8WUA4 911 aaPredicted RBP24.1■■□□□ 1.45
USP6NL-204ENST00000606752 MRFAP1L1Q96HT8 127 aa24.1■■□□□ 1.45
USP6NL-204ENST00000606752 INPP4AQ96PE3 977 aaPredicted RBP24.1■■□□□ 1.45
USP6NL-204ENST00000606752 SLC45A1Q9Y2W3 748 aa24.1■■□□□ 1.45
USP6NL-204ENST00000606752 ERCC3P19447 782 aa24.09■■□□□ 1.45
USP6NL-204ENST00000606752 SLC12A3P55017 1021 aa24.09■■□□□ 1.45
USP6NL-204ENST00000606752 PSMC6P62333 389 aa24.09■■□□□ 1.45
USP6NL-204ENST00000606752 CST9Q5W186 159 aa24.09■■□□□ 1.45
USP6NL-204ENST00000606752 CHADLQ6NUI6 762 aa24.09■■□□□ 1.45
USP6NL-204ENST00000606752 SYT2Q8N9I0 419 aaPredicted RBP24.09■■□□□ 1.45
USP6NL-204ENST00000606752 DYDC2Q96IM9 177 aa24.09■■□□□ 1.45
USP6NL-204ENST00000606752 PKD2L1Q9P0L9 805 aa24.09■■□□□ 1.45
USP6NL-204ENST00000606752 RWDD2AQ9UIY3 292 aa24.09■■□□□ 1.45
USP6NL-204ENST00000606752 PTMAP06454 111 aaKnown RBP24.08■■□□□ 1.45
USP6NL-204ENST00000606752 PAK1Q13153 545 aa24.08■■□□□ 1.45
USP6NL-204ENST00000606752 STIM1Q13586 685 aa24.08■■□□□ 1.45
USP6NL-204ENST00000606752 Q3C1V9 767 aa24.08■■□□□ 1.45
USP6NL-204ENST00000606752 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.08■■□□□ 1.45
USP6NL-204ENST00000606752 TPH2Q8IWU9 490 aa24.08■■□□□ 1.45
USP6NL-204ENST00000606752 DNAJC19Q96DA6 116 aa24.08■■□□□ 1.45
USP6NL-204ENST00000606752 CTNND2Q9UQB3 1225 aa24.08■■□□□ 1.45
USP6NL-204ENST00000606752 SYNRGQ9UMZ2 1314 aa24.08■■□□□ 1.45
USP6NL-204ENST00000606752 CCL15-CCL14A0A0B4J2E2 113 aa24.07■■□□□ 1.44
USP6NL-204ENST00000606752 DDX39AO00148 427 aaKnown RBP24.07■■□□□ 1.44
USP6NL-204ENST00000606752 ATP1A3P13637 1013 aa24.07■■□□□ 1.44
USP6NL-204ENST00000606752 CYP11B2P19099 503 aa24.07■■□□□ 1.44
USP6NL-204ENST00000606752 CDC25BP30305 580 aa24.07■■□□□ 1.44
USP6NL-204ENST00000606752 STX17P56962 302 aa24.07■■□□□ 1.44
USP6NL-204ENST00000606752 CNTN2Q02246 1040 aa24.07■■□□□ 1.44
USP6NL-204ENST00000606752 CTTNQ14247 550 aaKnown RBP24.07■■□□□ 1.44
USP6NL-204ENST00000606752 CCL15Q16663 113 aa24.07■■□□□ 1.44
USP6NL-204ENST00000606752 SPRYD7Q5W111 196 aa24.07■■□□□ 1.44
USP6NL-204ENST00000606752 MIER3Q7Z3K6 550 aa24.07■■□□□ 1.44
USP6NL-204ENST00000606752 GPBP1Q86WP2 473 aa24.07■■□□□ 1.44
USP6NL-204ENST00000606752 NEK9Q8TD19 979 aa24.07■■□□□ 1.44
USP6NL-204ENST00000606752 MAPK8IP1Q9UQF2 711 aa24.07■■□□□ 1.44
USP6NL-204ENST00000606752 EYA4O95677 639 aa24.07■■□□□ 1.44
USP6NL-204ENST00000606752 ZBTB48P10074 688 aaPredicted RBP24.07■■□□□ 1.44
USP6NL-204ENST00000606752 IDEP14735 1019 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms