RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 POLR3EQ9NVU0 708 aa8.69□□□□□ -1.02
MSH6-211ENST00000606499 NRBP1Q9UHY1 535 aa8.69□□□□□ -1.02
MSH6-211ENST00000606499 DDX41Q9UJV9 622 aaKnown RBP8.69□□□□□ -1.02
MSH6-211ENST00000606499 VAV3Q9UKW4 847 aa8.69□□□□□ -1.02
MSH6-211ENST00000606499 FAM184BQ9ULE4 1060 aa8.69□□□□□ -1.02
MSH6-211ENST00000606499 ARID2Q68CP9 1835 aa8.68□□□□□ -1.02
MSH6-211ENST00000606499 POTEFA5A3E0 1075 aa8.68□□□□□ -1.02
MSH6-211ENST00000606499 TBX3O15119 743 aa8.68□□□□□ -1.02
MSH6-211ENST00000606499 DHX15O43143 795 aaKnown RBP8.68□□□□□ -1.02
MSH6-211ENST00000606499 SEPT4O43236 478 aa8.68□□□□□ -1.02
MSH6-211ENST00000606499 CHMP2AO43633 222 aa8.68□□□□□ -1.02
MSH6-211ENST00000606499 MARCH6O60337 910 aa8.68□□□□□ -1.02
MSH6-211ENST00000606499 GAS7O60861 476 aa8.68□□□□□ -1.02
MSH6-211ENST00000606499 PSMD10O75832 226 aa8.68□□□□□ -1.02
MSH6-211ENST00000606499 FARP2O94887 1054 aaPredicted RBP8.68□□□□□ -1.02
MSH6-211ENST00000606499 BAG4O95429 457 aaKnown RBP8.68□□□□□ -1.02
MSH6-211ENST00000606499 YEATS4O95619 227 aa8.68□□□□□ -1.02
MSH6-211ENST00000606499 CCNE2O96020 404 aa8.68□□□□□ -1.02
MSH6-211ENST00000606499 TGFB3P10600 412 aa8.68□□□□□ -1.02
MSH6-211ENST00000606499 AKR1A1P14550 325 aa8.68□□□□□ -1.02
MSH6-211ENST00000606499 MARCKSP29966 332 aaPredicted RBP8.68□□□□□ -1.02
MSH6-211ENST00000606499 GRIN1Q05586 938 aa8.68□□□□□ -1.02
MSH6-211ENST00000606499 SLC39A14Q15043 492 aa8.68□□□□□ -1.02
MSH6-211ENST00000606499 STK38Q15208 465 aa8.68□□□□□ -1.02
MSH6-211ENST00000606499 MTFR1Q15390 333 aa8.68□□□□□ -1.02
MSH6-211ENST00000606499 PKN2Q16513 984 aaKnown RBP8.68□□□□□ -1.02
MSH6-211ENST00000606499 IL17AQ16552 155 aa8.68□□□□□ -1.02
MSH6-211ENST00000606499 DUSP28Q4G0W2 176 aa8.68□□□□□ -1.02
MSH6-211ENST00000606499 ATL3Q6DD88 541 aa8.68□□□□□ -1.02
MSH6-211ENST00000606499 IQSEC1Q6DN90 963 aa8.68□□□□□ -1.02
MSH6-211ENST00000606499 KCNV1Q6PIU1 500 aa8.68□□□□□ -1.02
MSH6-211ENST00000606499 CYFIP1Q7L576 1253 aa8.68□□□□□ -1.02
MSH6-211ENST00000606499 TLK2Q86UE8 772 aa8.68□□□□□ -1.02
MSH6-211ENST00000606499 DHX37Q8IY37 1157 aaKnown RBP8.68□□□□□ -1.02
MSH6-211ENST00000606499 LINC00301Q8NCQ3 95 aa8.68□□□□□ -1.02
MSH6-211ENST00000606499 LEO1Q8WVC0 666 aaPredicted RBP8.68□□□□□ -1.02
MSH6-211ENST00000606499 FAM20AQ96MK3 541 aa8.68□□□□□ -1.02
MSH6-211ENST00000606499 RIT2Q99578 217 aa8.68□□□□□ -1.02
MSH6-211ENST00000606499 SDF4Q9BRK5 362 aa8.68□□□□□ -1.02
MSH6-211ENST00000606499 MCOLN1Q9GZU1 580 aa8.68□□□□□ -1.02
MSH6-211ENST00000606499 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.68□□□□□ -1.024e-8■■□□□ 12.3
MSH6-211ENST00000606499 UNC93B1Q9H1C4 597 aa8.68□□□□□ -1.02
MSH6-211ENST00000606499 UNC45AQ9H3U1 944 aa8.68□□□□□ -1.02
MSH6-211ENST00000606499 TTC12Q9H892 705 aaPredicted RBP8.68□□□□□ -1.02
MSH6-211ENST00000606499 HMX1Q9NP08 348 aaPredicted RBP8.68□□□□□ -1.02
MSH6-211ENST00000606499 FBXO2Q9UK22 296 aaPredicted RBP8.68□□□□□ -1.02
MSH6-211ENST00000606499 CFAP45Q9UL16 551 aa8.68□□□□□ -1.02
MSH6-211ENST00000606499 CEP131Q9UPN4 1083 aa8.68□□□□□ -1.02
MSH6-211ENST00000606499 NFASCO94856 1347 aa8.68□□□□□ -1.02
MSH6-211ENST00000606499 SYNRGQ9UMZ2 1314 aa8.68□□□□□ -1.02
MSH6-211ENST00000606499 VWA3AA6NCI4 1184 aa8.67□□□□□ -1.02
MSH6-211ENST00000606499 POTEMA6NI47 508 aa8.67□□□□□ -1.02
MSH6-211ENST00000606499 PP2D1A8MPX8 630 aa8.67□□□□□ -1.02
MSH6-211ENST00000606499 LAD1O00515 517 aa8.67□□□□□ -1.02
MSH6-211ENST00000606499 SPTLC2O15270 562 aa8.67□□□□□ -1.02
MSH6-211ENST00000606499 MAFGO15525 162 aa8.67□□□□□ -1.02
MSH6-211ENST00000606499 ELP1O95163 1332 aa8.67□□□□□ -1.02
MSH6-211ENST00000606499 BMP15O95972 392 aa8.67□□□□□ -1.02
MSH6-211ENST00000606499 GH1P01241 217 aa8.67□□□□□ -1.02
MSH6-211ENST00000606499 CCL5P13501 91 aa8.67□□□□□ -1.02
MSH6-211ENST00000606499 PRPHP41219 470 aa8.67□□□□□ -1.02
MSH6-211ENST00000606499 TECP42680 631 aa8.67□□□□□ -1.02
MSH6-211ENST00000606499 SPIRE1Q08AE8 756 aa8.67□□□□□ -1.02
MSH6-211ENST00000606499 NEDD9Q14511 834 aa8.67□□□□□ -1.02
MSH6-211ENST00000606499 HSDL1Q3SXM5 330 aa8.67□□□□□ -1.02
MSH6-211ENST00000606499 CELF3Q5SZQ8 465 aaKnown RBP8.67□□□□□ -1.02
MSH6-211ENST00000606499 NCAPH2Q6IBW4 605 aa8.67□□□□□ -1.02
MSH6-211ENST00000606499 METTL7BQ6UX53 244 aa8.67□□□□□ -1.02
MSH6-211ENST00000606499 SLFN12Q8IYM2 578 aa8.67□□□□□ -1.02
MSH6-211ENST00000606499 OR6J1Q8NGC5 347 aa8.67□□□□□ -1.02
MSH6-211ENST00000606499 ZNF333Q96JL9 665 aa8.67□□□□□ -1.02
MSH6-211ENST00000606499 SPATA32Q96LK8 384 aa8.67□□□□□ -1.02
MSH6-211ENST00000606499 SENP7Q9BQF6 1050 aa8.67□□□□□ -1.02
MSH6-211ENST00000606499 TEKT3Q9BXF9 490 aa8.67□□□□□ -1.02
MSH6-211ENST00000606499 MLXIPQ9HAP2 919 aa8.67□□□□□ -1.02
MSH6-211ENST00000606499 JPH1Q9HDC5 661 aaPredicted RBP8.67□□□□□ -1.02
MSH6-211ENST00000606499 XPNPEP3Q9NQH7 507 aa8.67□□□□□ -1.02
MSH6-211ENST00000606499 TBC1D22BQ9NU19 505 aa8.67□□□□□ -1.02
MSH6-211ENST00000606499 SLC9A2Q9UBY0 812 aa8.67□□□□□ -1.02
MSH6-211ENST00000606499 DDX20Q9UHI6 824 aaKnown RBP8.67□□□□□ -1.02
MSH6-211ENST00000606499 PCDHA12Q9UN75 941 aa8.67□□□□□ -1.02
MSH6-211ENST00000606499 GNEQ9Y223 722 aaKnown RBP8.67□□□□□ -1.02
MSH6-211ENST00000606499 MKI67P46013 3256 aaKnown RBP8.67□□□□□ -1.02
MSH6-211ENST00000606499 MYADML2A6NDP7 307 aa8.66□□□□□ -1.02
MSH6-211ENST00000606499 EML1O00423 815 aa8.66□□□□□ -1.02
MSH6-211ENST00000606499 NKRFO15226 690 aaKnown RBP eCLIP8.66□□□□□ -1.02
MSH6-211ENST00000606499 DYNC1LI2O43237 492 aaPredicted RBP8.66□□□□□ -1.02
MSH6-211ENST00000606499 DUSP11O75319 330 aaKnown RBP8.66□□□□□ -1.02
MSH6-211ENST00000606499 PGK1P00558 417 aa8.66□□□□□ -1.02
MSH6-211ENST00000606499 RARBP10826 455 aa8.66□□□□□ -1.02
MSH6-211ENST00000606499 ME1P48163 572 aa8.66□□□□□ -1.02
MSH6-211ENST00000606499 FXR2P51116 673 aaKnown RBP eCLIP8.66□□□□□ -1.024e-8■■■■■ 33.5
MSH6-211ENST00000606499 ACTR2P61160 394 aa8.66□□□□□ -1.02
MSH6-211ENST00000606499 BEX3Q00994 111 aa8.66□□□□□ -1.02
MSH6-211ENST00000606499 KRT76Q01546 638 aa8.66□□□□□ -1.02
MSH6-211ENST00000606499 PPP2R5CQ13362 524 aa8.66□□□□□ -1.02
MSH6-211ENST00000606499 TMEM266Q2M3C6 531 aa8.66□□□□□ -1.02
MSH6-211ENST00000606499 ARL6IP4Q66PJ3 421 aaKnown RBP8.66□□□□□ -1.02
MSH6-211ENST00000606499 LHX8Q68G74 356 aa8.66□□□□□ -1.02
MSH6-211ENST00000606499 B3GNT9Q6UX72 402 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms