RNA–Protein interactions for RNA: ENST00000605204.1

SRSF4-206, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 1 (best)

Gene SRSF4, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-206ENST00000605204 FAM109BQ6ICB4 259 aaPredicted RBP21.94■■□□□ 1.1
SRSF4-206ENST00000605204 GALNT17Q6IS24 598 aa21.94■■□□□ 1.1
SRSF4-206ENST00000605204 NIPA1Q7RTP0 329 aa21.94■■□□□ 1.1
SRSF4-206ENST00000605204 C22orf23Q9BZE7 217 aa21.94■■□□□ 1.1
SRSF4-206ENST00000605204 TPCN1Q9ULQ1 816 aa21.94■■□□□ 1.1
SRSF4-206ENST00000605204 FPGSQ05932 587 aa21.93■■□□□ 1.1
SRSF4-206ENST00000605204 SCRN1Q12765 414 aa21.93■■□□□ 1.1
SRSF4-206ENST00000605204 STK3Q13188 491 aa21.93■■□□□ 1.1
SRSF4-206ENST00000605204 CEP55Q53EZ4 464 aa21.93■■□□□ 1.1
SRSF4-206ENST00000605204 MFSD5Q6N075 450 aa21.93■■□□□ 1.1
SRSF4-206ENST00000605204 TMEM199Q8N511 208 aa21.93■■□□□ 1.1
SRSF4-206ENST00000605204 ZFP91Q96JP5 570 aaPredicted RBP21.93■■□□□ 1.1
SRSF4-206ENST00000605204 MXRA8Q9BRK3 442 aa21.93■■□□□ 1.1
SRSF4-206ENST00000605204 HIPK3Q9H422 1215 aa21.93■■□□□ 1.1
SRSF4-206ENST00000605204 UPF2Q9HAU5 1272 aaKnown RBP21.93■■□□□ 1.1
SRSF4-206ENST00000605204 XBP1P17861 261 aa21.92■■□□□ 1.1
SRSF4-206ENST00000605204 EPHB4P54760 987 aa21.92■■□□□ 1.1
SRSF4-206ENST00000605204 ARHGAP4P98171 946 aa21.92■■□□□ 1.1
SRSF4-206ENST00000605204 KAT2BQ92831 832 aa21.92■■□□□ 1.1
SRSF4-206ENST00000605204 SCN10AQ9Y5Y9 1956 aa21.92■■□□□ 1.1
SRSF4-206ENST00000605204 HAS3O00219 553 aa21.91■■□□□ 1.1
SRSF4-206ENST00000605204 CYP3A4P08684 503 aa21.91■■□□□ 1.1
SRSF4-206ENST00000605204 KCNA2P16389 499 aa21.91■■□□□ 1.1
SRSF4-206ENST00000605204 NLRP5P59047 1200 aa21.91■■□□□ 1.1
SRSF4-206ENST00000605204 PPIGQ13427 754 aaKnown RBP eCLIP21.91■■□□□ 1.11e-6■■□□□ 13.3
SRSF4-206ENST00000605204 MFSD10Q14728 455 aa21.91■■□□□ 1.1
SRSF4-206ENST00000605204 ZNF697Q5TEC3 545 aa21.91■■□□□ 1.1
SRSF4-206ENST00000605204 CYFIP1Q7L576 1253 aa21.91■■□□□ 1.1
SRSF4-206ENST00000605204 C7orf31Q8N865 590 aa21.91■■□□□ 1.1
SRSF4-206ENST00000605204 WASF1Q92558 559 aa21.91■■□□□ 1.1
SRSF4-206ENST00000605204 LARP6Q9BRS8 491 aaKnown RBP21.91■■□□□ 1.1
SRSF4-206ENST00000605204 TRPV6Q9H1D0 765 aa21.91■■□□□ 1.1
SRSF4-206ENST00000605204 VPS54Q9P1Q0 977 aa21.91■■□□□ 1.1
SRSF4-206ENST00000605204 ZNF215Q9UL58 517 aaPredicted RBP21.91■■□□□ 1.1
SRSF4-206ENST00000605204 NOD1Q9Y239 953 aa21.91■■□□□ 1.1
SRSF4-206ENST00000605204 ZNF76P36508 570 aa21.9■■□□□ 1.1
SRSF4-206ENST00000605204 PSEN2P49810 448 aa21.9■■□□□ 1.1
SRSF4-206ENST00000605204 SETQ01105 290 aaPredicted RBP21.9■■□□□ 1.1
SRSF4-206ENST00000605204 JAKMIP3Q5VZ66 844 aa21.9■■□□□ 1.1
SRSF4-206ENST00000605204 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.9■■□□□ 1.12e-6■□□□□ 8.1
SRSF4-206ENST00000605204 CCDC155Q8N6L0 562 aa21.9■■□□□ 1.1
SRSF4-206ENST00000605204 CRYGNQ8WXF5 182 aa21.9■■□□□ 1.1
SRSF4-206ENST00000605204 GPR20Q99678 358 aa21.9■■□□□ 1.1
SRSF4-206ENST00000605204 NOC4LQ9BVI4 516 aaKnown RBP21.9■■□□□ 1.1
SRSF4-206ENST00000605204 KCNH7Q9NS40 1196 aa21.9■■□□□ 1.1
SRSF4-206ENST00000605204 NFASCO94856 1347 aa21.9■■□□□ 1.1
SRSF4-206ENST00000605204 PITPNM1O00562 1244 aa21.89■■□□□ 1.1
SRSF4-206ENST00000605204 ZNF286BP0CG31 522 aa21.89■■□□□ 1.1
SRSF4-206ENST00000605204 RBM25P49756 843 aaKnown RBP21.89■■□□□ 1.1
SRSF4-206ENST00000605204 KIAA0753Q2KHM9 967 aa21.89■■□□□ 1.1
SRSF4-206ENST00000605204 DAGLBQ8NCG7 672 aa21.89■■□□□ 1.1
SRSF4-206ENST00000605204 GTF3C6Q969F1 213 aa21.89■■□□□ 1.1
SRSF4-206ENST00000605204 SDF4Q9BRK5 362 aa21.89■■□□□ 1.1
SRSF4-206ENST00000605204 C16orf70Q9BSU1 422 aa21.89■■□□□ 1.1
SRSF4-206ENST00000605204 COL25A1Q9BXS0 654 aaPredicted RBP21.89■■□□□ 1.1
SRSF4-206ENST00000605204 TTYH1Q9H313 450 aaPredicted RBP21.89■■□□□ 1.1
SRSF4-206ENST00000605204 TRMT13Q9NUP7 481 aaKnown RBP21.89■■□□□ 1.1
SRSF4-206ENST00000605204 TMEM260Q9NX78 707 aa21.89■■□□□ 1.1
SRSF4-206ENST00000605204 GTF2IRD1Q9UHL9 959 aa21.89■■□□□ 1.1
SRSF4-206ENST00000605204 H3BRB1 525 aa21.88■■□□□ 1.09
SRSF4-206ENST00000605204 MEIS1O00470 390 aa21.88■■□□□ 1.09
SRSF4-206ENST00000605204 LGALS2P05162 132 aa21.88■■□□□ 1.09
SRSF4-206ENST00000605204 BFSP2Q13515 415 aa21.88■■□□□ 1.09
SRSF4-206ENST00000605204 PGBD1Q96JS3 809 aa21.88■■□□□ 1.09
SRSF4-206ENST00000605204 TUT1Q9H6E5 874 aaKnown RBP21.88■■□□□ 1.09
SRSF4-206ENST00000605204 JPH1Q9HDC5 661 aaPredicted RBP21.88■■□□□ 1.09
SRSF4-206ENST00000605204 PCDHA4Q9UN74 947 aa21.88■■□□□ 1.09
SRSF4-206ENST00000605204 PPFIA3O75145 1194 aa21.87■■□□□ 1.09
SRSF4-206ENST00000605204 PSRC1Q6PGN9 363 aaPredicted RBP21.87■■□□□ 1.09
SRSF4-206ENST00000605204 CAGE1Q8TC20 777 aa21.87■■□□□ 1.09
SRSF4-206ENST00000605204 SEPT1Q8WYJ6 367 aa21.87■■□□□ 1.09
SRSF4-206ENST00000605204 CDX2Q99626 313 aaPredicted RBP21.87■■□□□ 1.09
SRSF4-206ENST00000605204 PPP1R12CQ9BZL4 782 aa21.87■■□□□ 1.09
SRSF4-206ENST00000605204 PFKMP08237 780 aa21.87■■□□□ 1.09
SRSF4-206ENST00000605204 CIITAP33076 1130 aa21.87■■□□□ 1.09
SRSF4-206ENST00000605204 CHMP4BP1P59074 171 aa21.87■■□□□ 1.09
SRSF4-206ENST00000605204 PTGISQ16647 500 aa21.87■■□□□ 1.09
SRSF4-206ENST00000605204 ME3Q16798 604 aa21.87■■□□□ 1.09
SRSF4-206ENST00000605204 AGO4Q9HCK5 861 aaKnown RBP21.87■■□□□ 1.09
SRSF4-206ENST00000605204 LIMCH1Q9UPQ0 1083 aa21.87■■□□□ 1.09
SRSF4-206ENST00000605204 SORBS3O60504 671 aa21.86■■□□□ 1.09
SRSF4-206ENST00000605204 ATP9AO75110 1047 aa21.86■■□□□ 1.09
SRSF4-206ENST00000605204 PARNO95453 639 aaKnown RBP21.86■■□□□ 1.09
SRSF4-206ENST00000605204 GNAT1P11488 350 aa21.86■■□□□ 1.09
SRSF4-206ENST00000605204 RFC2P35250 354 aa21.86■■□□□ 1.09
SRSF4-206ENST00000605204 USP11P51784 963 aa21.86■■□□□ 1.09
SRSF4-206ENST00000605204 RBL2Q08999 1139 aa21.86■■□□□ 1.09
SRSF4-206ENST00000605204 BLIDQ8IZY5 108 aa21.86■■□□□ 1.09
SRSF4-206ENST00000605204 SLC9A2Q9UBY0 812 aa21.86■■□□□ 1.09
SRSF4-206ENST00000605204 CYP2C18P33260 490 aa21.85■■□□□ 1.09
SRSF4-206ENST00000605204 TCF7P36402 384 aaPredicted RBP21.85■■□□□ 1.09
SRSF4-206ENST00000605204 PLA2G4DQ86XP0 818 aa21.85■■□□□ 1.09
SRSF4-206ENST00000605204 RPUSD2Q8IZ73 545 aaKnown RBP21.85■■□□□ 1.09
SRSF4-206ENST00000605204 RETREG2Q8NC44 543 aa21.85■■□□□ 1.09
SRSF4-206ENST00000605204 MYLIPQ8WY64 445 aa21.85■■□□□ 1.09
SRSF4-206ENST00000605204 TNPO1Q92973 898 aaKnown RBP21.85■■□□□ 1.09
SRSF4-206ENST00000605204 ALG1Q9BT22 464 aa21.85■■□□□ 1.09
SRSF4-206ENST00000605204 MTIF3Q9H2K0 278 aaKnown RBP21.85■■□□□ 1.09
SRSF4-206ENST00000605204 ORC3Q9UBD5 711 aaPredicted RBP21.85■■□□□ 1.09
SRSF4-206ENST00000605204 HDAC6Q9UBN7 1215 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms