RNA–Protein interactions for RNA: ENST00000604926.1

COL4A3BP-207, Transcript of collagen type IV alpha 3 binding protein, humanhuman

Gene COL4A3BP, Length 3,355 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-207ENST00000604926 TCIRG1Q13488 830 aa6.4□□□□□ -1.38
COL4A3BP-207ENST00000604926 BYSLQ13895 437 aaKnown RBP6.4□□□□□ -1.38
COL4A3BP-207ENST00000604926 FBXW10Q5XX13 1052 aa6.4□□□□□ -1.38
COL4A3BP-207ENST00000604926 MFSD6Q6ZSS7 791 aa6.4□□□□□ -1.38
COL4A3BP-207ENST00000604926 TRIM58Q8NG06 486 aa6.4□□□□□ -1.38
COL4A3BP-207ENST00000604926 NXPE3Q969Y0 559 aa6.4□□□□□ -1.38
COL4A3BP-207ENST00000604926 CARD11Q9BXL7 1154 aa6.4□□□□□ -1.38
COL4A3BP-207ENST00000604926 RTFDC1Q9BY42 306 aaPredicted RBP6.4□□□□□ -1.38
COL4A3BP-207ENST00000604926 EDEM3Q9BZQ6 932 aa6.4□□□□□ -1.38
COL4A3BP-207ENST00000604926 TRPV6Q9H1D0 765 aa6.4□□□□□ -1.38
COL4A3BP-207ENST00000604926 RYDENQ9NUL5 291 aaKnown RBP6.4□□□□□ -1.38
COL4A3BP-207ENST00000604926 PHF24Q9UPV7 400 aa6.4□□□□□ -1.38
COL4A3BP-207ENST00000604926 DGKBQ9Y6T7 804 aa6.4□□□□□ -1.38
COL4A3BP-207ENST00000604926 CCDC144AA2RUR9 1427 aa6.4□□□□□ -1.38
COL4A3BP-207ENST00000604926 PLEKHG1Q9ULL1 1385 aa6.4□□□□□ -1.38
COL4A3BP-207ENST00000604926 SERPINC1P01008 464 aa6.4□□□□□ -1.38
COL4A3BP-207ENST00000604926 S100A6P06703 90 aa6.4□□□□□ -1.38
COL4A3BP-207ENST00000604926 C6orf222P0C671 652 aaPredicted RBP6.4□□□□□ -1.38
COL4A3BP-207ENST00000604926 PLCG2P16885 1265 aa6.4□□□□□ -1.38
COL4A3BP-207ENST00000604926 HOXD12P35452 270 aa6.4□□□□□ -1.38
COL4A3BP-207ENST00000604926 CHMP4BP1P59074 171 aa6.4□□□□□ -1.38
COL4A3BP-207ENST00000604926 TGFB2P61812 414 aa6.4□□□□□ -1.38
COL4A3BP-207ENST00000604926 ACY1Q03154 408 aa6.4□□□□□ -1.38
COL4A3BP-207ENST00000604926 ANKDD1AQ495B1 522 aa6.4□□□□□ -1.38
COL4A3BP-207ENST00000604926 SLC45A4Q5BKX6 768 aa6.4□□□□□ -1.38
COL4A3BP-207ENST00000604926 THEMIS2Q5TEJ8 643 aa6.4□□□□□ -1.38
COL4A3BP-207ENST00000604926 CAPN12Q6ZSI9 719 aa6.4□□□□□ -1.38
COL4A3BP-207ENST00000604926 MFN1Q8IWA4 741 aa6.4□□□□□ -1.38
COL4A3BP-207ENST00000604926 FAM20CQ8IXL6 584 aa6.4□□□□□ -1.38
COL4A3BP-207ENST00000604926 LRRC47Q8N1G4 583 aaKnown RBP6.4□□□□□ -1.38
COL4A3BP-207ENST00000604926 OR6C4Q8NGE1 309 aa6.4□□□□□ -1.38
COL4A3BP-207ENST00000604926 UTP15Q8TED0 518 aaKnown RBP6.4□□□□□ -1.38
COL4A3BP-207ENST00000604926 JPH2Q9BR39 696 aaPredicted RBP6.4□□□□□ -1.38
COL4A3BP-207ENST00000604926 MXD3Q9BW11 206 aa6.4□□□□□ -1.38
COL4A3BP-207ENST00000604926 ATPIF1Q9UII2 106 aa6.4□□□□□ -1.38
COL4A3BP-207ENST00000604926 PAIP2BQ9ULR5 123 aaKnown RBP6.4□□□□□ -1.38
COL4A3BP-207ENST00000604926 ZKSCAN5Q9Y2L8 839 aa6.4□□□□□ -1.38
COL4A3BP-207ENST00000604926 PCDHB13Q9Y5F0 798 aa6.4□□□□□ -1.38
COL4A3BP-207ENST00000604926 ARHGEF28Q8N1W1 1705 aaKnown RBP6.4□□□□□ -1.39
COL4A3BP-207ENST00000604926 SPDYE16A6NNV3 312 aaPredicted RBP6.4□□□□□ -1.39
COL4A3BP-207ENST00000604926 MTSS1O43312 755 aa6.4□□□□□ -1.39
COL4A3BP-207ENST00000604926 FBXO21O94952 628 aa6.4□□□□□ -1.39
COL4A3BP-207ENST00000604926 MT-ND3P03897 115 aa6.4□□□□□ -1.39
COL4A3BP-207ENST00000604926 HOXC12P31275 282 aa6.4□□□□□ -1.39
COL4A3BP-207ENST00000604926 EPS15P42566 896 aa6.4□□□□□ -1.39
COL4A3BP-207ENST00000604926 DSTNP60981 165 aa6.4□□□□□ -1.39
COL4A3BP-207ENST00000604926 TUBA3CQ13748 450 aa6.4□□□□□ -1.39
COL4A3BP-207ENST00000604926 GNA13Q14344 377 aa6.4□□□□□ -1.39
COL4A3BP-207ENST00000604926 STRA8Q7Z7C7 330 aa6.4□□□□□ -1.39
COL4A3BP-207ENST00000604926 CNKSR1Q969H4 720 aa6.4□□□□□ -1.39
COL4A3BP-207ENST00000604926 RNF34Q969K3 372 aa6.4□□□□□ -1.39
COL4A3BP-207ENST00000604926 NRBF2Q96F24 287 aa6.4□□□□□ -1.39
COL4A3BP-207ENST00000604926 COG3Q96JB2 828 aa6.4□□□□□ -1.39
COL4A3BP-207ENST00000604926 ZNF594Q96JF6 807 aaPredicted RBP6.4□□□□□ -1.39
COL4A3BP-207ENST00000604926 CNDP2Q96KP4 475 aaKnown RBP6.4□□□□□ -1.39
COL4A3BP-207ENST00000604926 SERHL2Q9H4I8 314 aa6.4□□□□□ -1.39
COL4A3BP-207ENST00000604926 VPS37BQ9H9H4 285 aa6.4□□□□□ -1.39
COL4A3BP-207ENST00000604926 CRLF2Q9HC73 371 aa6.4□□□□□ -1.39
COL4A3BP-207ENST00000604926 FAM53CQ9NYF3 392 aa6.4□□□□□ -1.39
COL4A3BP-207ENST00000604926 MINK1Q8N4C8 1332 aaPredicted RBP6.39□□□□□ -1.39
COL4A3BP-207ENST00000604926 ZMYM3Q14202 1370 aa6.39□□□□□ -1.39
COL4A3BP-207ENST00000604926 ATAD2Q6PL18 1390 aa6.39□□□□□ -1.39
COL4A3BP-207ENST00000604926 NHSQ6T4R5 1651 aa6.39□□□□□ -1.39
COL4A3BP-207ENST00000604926 J3KRW8 73 aa6.39□□□□□ -1.39
COL4A3BP-207ENST00000604926 ZBTB14O43829 449 aa6.39□□□□□ -1.39
COL4A3BP-207ENST00000604926 DGKIO75912 1065 aa6.39□□□□□ -1.39
COL4A3BP-207ENST00000604926 SEC24DO94855 1032 aaPredicted RBP6.39□□□□□ -1.39
COL4A3BP-207ENST00000604926 ADCY5O95622 1261 aa6.39□□□□□ -1.39
COL4A3BP-207ENST00000604926 CD4P01730 458 aa6.39□□□□□ -1.39
COL4A3BP-207ENST00000604926 CNGA1P29973 690 aa6.39□□□□□ -1.39
COL4A3BP-207ENST00000604926 MAPK9P45984 424 aa6.39□□□□□ -1.39
COL4A3BP-207ENST00000604926 KRT83P78385 493 aa6.39□□□□□ -1.39
COL4A3BP-207ENST00000604926 AIMP1Q12904 312 aaKnown RBP6.39□□□□□ -1.39
COL4A3BP-207ENST00000604926 ARHGAP11AQ6P4F7 1023 aa6.39□□□□□ -1.39
COL4A3BP-207ENST00000604926 KDELC1Q6UW63 502 aa6.39□□□□□ -1.39
COL4A3BP-207ENST00000604926 LPCAT2Q7L5N7 544 aa6.39□□□□□ -1.39
COL4A3BP-207ENST00000604926 TMC4Q7Z404 712 aa6.39□□□□□ -1.39
COL4A3BP-207ENST00000604926 IFNL1Q8IU54 200 aa6.39□□□□□ -1.39
COL4A3BP-207ENST00000604926 UBR7Q8N806 425 aa6.39□□□□□ -1.39
COL4A3BP-207ENST00000604926 FBXO18Q8NFZ0 1043 aa6.39□□□□□ -1.39
COL4A3BP-207ENST00000604926 CCDC110Q8TBZ0 833 aa6.39□□□□□ -1.39
COL4A3BP-207ENST00000604926 CCT7Q99832 543 aa6.39□□□□□ -1.39
COL4A3BP-207ENST00000604926 STK31Q9BXU1 1019 aa6.39□□□□□ -1.39
COL4A3BP-207ENST00000604926 UBN1Q9NPG3 1134 aa6.39□□□□□ -1.39
COL4A3BP-207ENST00000604926 AATFQ9NY61 560 aaKnown RBP eCLIP6.39□□□□□ -1.39
COL4A3BP-207ENST00000604926 STIM2Q9P246 746 aa6.39□□□□□ -1.39
COL4A3BP-207ENST00000604926 WDR35Q9P2L0 1181 aa6.39□□□□□ -1.39
COL4A3BP-207ENST00000604926 GTF2IRD1Q9UHL9 959 aa6.39□□□□□ -1.39
COL4A3BP-207ENST00000604926 HFM1A2PYH4 1435 aa6.39□□□□□ -1.39
COL4A3BP-207ENST00000604926 SERTM1A2A2V5 107 aa6.39□□□□□ -1.39
COL4A3BP-207ENST00000604926 FAM155AB1AL88 458 aaPredicted RBP6.39□□□□□ -1.39
COL4A3BP-207ENST00000604926 ASAP2O43150 1006 aa6.39□□□□□ -1.39
COL4A3BP-207ENST00000604926 STX6O43752 255 aa6.39□□□□□ -1.39
COL4A3BP-207ENST00000604926 P4HBP07237 508 aaKnown RBP6.39□□□□□ -1.39
COL4A3BP-207ENST00000604926 SLC3A2P08195 630 aaKnown RBP6.39□□□□□ -1.39
COL4A3BP-207ENST00000604926 TROVE2P10155 538 aaKnown RBP eCLIP6.39□□□□□ -1.39
COL4A3BP-207ENST00000604926 OXCT1P55809 520 aa6.39□□□□□ -1.39
COL4A3BP-207ENST00000604926 GNL2Q13823 731 aaKnown RBP6.39□□□□□ -1.39
COL4A3BP-207ENST00000604926 C21orf62-AS1Q17RA5 79 aa6.39□□□□□ -1.39
COL4A3BP-207ENST00000604926 CWF19L1Q69YN2 538 aaKnown RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms