RNA–Protein interactions for RNA: ENST00000604740.5

LAMA4-222, Transcript of laminin subunit alpha 4, human

TSL 2

Gene LAMA4, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LAMA4-222	ENST00000604740	RBPJL	Q9UBG7	517 aa		6.13	□□□□□ -1.43
LAMA4-222	ENST00000604740	PPARGC1A	Q9UBK2	798 aa	Known RBP	6.13	□□□□□ -1.43
LAMA4-222	ENST00000604740	ASH2L	Q9UBL3	628 aa		6.13	□□□□□ -1.43
LAMA4-222	ENST00000604740	WASF3	Q9UPY6	502 aa		6.13	□□□□□ -1.43
LAMA4-222	ENST00000604740		A0A1W2PQU0	124 aa		6.12	□□□□□ -1.43
LAMA4-222	ENST00000604740	NPEPPSL1	A6NEC2	478 aa		6.12	□□□□□ -1.43
LAMA4-222	ENST00000604740	MSC	O60682	206 aa		6.12	□□□□□ -1.43
LAMA4-222	ENST00000604740	ARHGEF18	Q6ZSZ5	1173 aa		6.12	□□□□□ -1.43
LAMA4-222	ENST00000604740	HOMEZ	Q8IX15	550 aa		6.12	□□□□□ -1.43
LAMA4-222	ENST00000604740	KBTBD2	Q8IY47	623 aa		6.12	□□□□□ -1.43
LAMA4-222	ENST00000604740	PIP4K2C	Q8TBX8	421 aa		6.12	□□□□□ -1.43
LAMA4-222	ENST00000604740	IGDCC4	Q8TDY8	1250 aa		6.12	□□□□□ -1.43
LAMA4-222	ENST00000604740	HNRNPLL	Q8WVV9	542 aa	Known RBP	6.12	□□□□□ -1.43
LAMA4-222	ENST00000604740	KISS1R	Q969F8	398 aa	Predicted RBP	6.12	□□□□□ -1.43
LAMA4-222	ENST00000604740	PHF20	Q9BVI0	1012 aa		6.12	□□□□□ -1.43
LAMA4-222	ENST00000604740	CDIP1	Q9H305	208 aa		6.12	□□□□□ -1.43
LAMA4-222	ENST00000604740	ST7	Q9NRC1	585 aa		6.12	□□□□□ -1.43
LAMA4-222	ENST00000604740	GPR27	Q9NS67	375 aa		6.12	□□□□□ -1.43
LAMA4-222	ENST00000604740	SLC27A2	O14975	620 aa		6.11	□□□□□ -1.43
LAMA4-222	ENST00000604740	CAPNS1	P04632	268 aa		6.11	□□□□□ -1.43
LAMA4-222	ENST00000604740	GRIN1	Q05586	938 aa		6.11	□□□□□ -1.43
LAMA4-222	ENST00000604740	ICAM4	Q14773	271 aa		6.11	□□□□□ -1.43
LAMA4-222	ENST00000604740	PHF19	Q5T6S3	580 aa		6.11	□□□□□ -1.43
LAMA4-222	ENST00000604740	VASN	Q6EMK4	673 aa		6.11	□□□□□ -1.43
LAMA4-222	ENST00000604740	CYP4F22	Q6NT55	531 aa		6.11	□□□□□ -1.43
LAMA4-222	ENST00000604740	PKN3	Q6P5Z2	889 aa		6.11	□□□□□ -1.43
LAMA4-222	ENST00000604740	TRIM48	Q8IWZ4	208 aa		6.11	□□□□□ -1.43
LAMA4-222	ENST00000604740	KLHL36	Q8N4N3	616 aa		6.11	□□□□□ -1.43
LAMA4-222	ENST00000604740	BARX1	Q9HBU1	254 aa	Predicted RBP	6.11	□□□□□ -1.43
LAMA4-222	ENST00000604740	SLC6A20	Q9NP91	592 aa		6.11	□□□□□ -1.43
LAMA4-222	ENST00000604740	ZDHHC9	Q9Y397	364 aa		6.11	□□□□□ -1.43
LAMA4-222	ENST00000604740	AKAP8	O43823	692 aa	Known RBP	6.1	□□□□□ -1.43
LAMA4-222	ENST00000604740	DLX3	O60479	287 aa		6.1	□□□□□ -1.43
LAMA4-222	ENST00000604740	TCF3	P15923	654 aa		6.1	□□□□□ -1.43
LAMA4-222	ENST00000604740	PPP2CB	P62714	309 aa		6.1	□□□□□ -1.43
LAMA4-222	ENST00000604740	PPP2CA	P67775	309 aa		6.1	□□□□□ -1.43
LAMA4-222	ENST00000604740	ARID5A	Q03989	594 aa		6.1	□□□□□ -1.43
LAMA4-222	ENST00000604740	CIR1	Q86X95	450 aa	Predicted RBP	6.1	□□□□□ -1.43
LAMA4-222	ENST00000604740	CELF2-AS1	Q8N7Q2	184 aa		6.1	□□□□□ -1.43
LAMA4-222	ENST00000604740	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	6.1	□□□□□ -1.43
LAMA4-222	ENST00000604740	DLL4	Q9NR61	685 aa		6.1	□□□□□ -1.43
LAMA4-222	ENST00000604740	GPR42	O15529	346 aa		6.09	□□□□□ -1.43
LAMA4-222	ENST00000604740	B4GALT4	O60513	344 aa		6.09	□□□□□ -1.43
LAMA4-222	ENST00000604740	FSHB	P01225	129 aa		6.09	□□□□□ -1.43
LAMA4-222	ENST00000604740	GRK2	P25098	689 aa		6.09	□□□□□ -1.43
LAMA4-222	ENST00000604740	DNAJA1	P31689	397 aa	Known RBP	6.09	□□□□□ -1.43
LAMA4-222	ENST00000604740	GRK3	P35626	688 aa		6.09	□□□□□ -1.43
LAMA4-222	ENST00000604740	EPHB4	P54760	987 aa		6.09	□□□□□ -1.43
LAMA4-222	ENST00000604740	NFATC3	Q12968	1075 aa		6.09	□□□□□ -1.43
LAMA4-222	ENST00000604740	HSP90AA2P	Q14568	343 aa	Predicted RBP	6.09	□□□□□ -1.43
LAMA4-222	ENST00000604740	SPRED1	Q7Z699	444 aa		6.09	□□□□□ -1.43
LAMA4-222	ENST00000604740	MCF2L2	Q86YR7	1114 aa		6.09	□□□□□ -1.43
LAMA4-222	ENST00000604740	RBM12B	Q8IXT5	1001 aa	Known RBP	6.09	□□□□□ -1.43
LAMA4-222	ENST00000604740	TTLL11	Q8NHH1	800 aa		6.09	□□□□□ -1.43
LAMA4-222	ENST00000604740	TINF2	Q9BSI4	451 aa		6.09	□□□□□ -1.43
LAMA4-222	ENST00000604740	SRRD	Q9UH36	339 aa		6.09	□□□□□ -1.43
LAMA4-222	ENST00000604740	COL6A1	P12109	1028 aa		6.08	□□□□□ -1.44
LAMA4-222	ENST00000604740	DDR2	Q16832	855 aa		6.08	□□□□□ -1.44
LAMA4-222	ENST00000604740	ZNF585A	Q6P3V2	769 aa		6.08	□□□□□ -1.44
LAMA4-222	ENST00000604740	RSPO2	Q6UXX9	243 aa	Predicted RBP	6.08	□□□□□ -1.44
LAMA4-222	ENST00000604740	OTOP3	Q7RTS5	596 aa		6.08	□□□□□ -1.44
LAMA4-222	ENST00000604740	PROSER1	Q86XN7	944 aa		6.08	□□□□□ -1.44
LAMA4-222	ENST00000604740	DTX3	Q8N9I9	347 aa		6.08	□□□□□ -1.44
LAMA4-222	ENST00000604740	NUDT10	Q8NFP7	164 aa		6.08	□□□□□ -1.44
LAMA4-222	ENST00000604740	CLEC4D	Q8WXI8	215 aa		6.08	□□□□□ -1.44
LAMA4-222	ENST00000604740	NUDT11	Q96G61	164 aa		6.08	□□□□□ -1.44
LAMA4-222	ENST00000604740	PTPN18	Q99952	460 aa		6.08	□□□□□ -1.44
LAMA4-222	ENST00000604740	AARSD1	Q9BTE6	412 aa	Known RBP	6.08	□□□□□ -1.44
LAMA4-222	ENST00000604740	KRTAP17-1	Q9BYP8	105 aa		6.08	□□□□□ -1.44
LAMA4-222	ENST00000604740	KLC2	Q9H0B6	622 aa		6.08	□□□□□ -1.44
LAMA4-222	ENST00000604740	HSPBP1	Q9NZL4	362 aa		6.08	□□□□□ -1.44
LAMA4-222	ENST00000604740	TSC22D4	Q9Y3Q8	395 aa		6.08	□□□□□ -1.44
LAMA4-222	ENST00000604740	PRODH	O43272	600 aa		6.07	□□□□□ -1.44
LAMA4-222	ENST00000604740	FBXO21	O94952	628 aa		6.07	□□□□□ -1.44
LAMA4-222	ENST00000604740	LTF	P02788	710 aa		6.07	□□□□□ -1.44
LAMA4-222	ENST00000604740	GNAT1	P11488	350 aa		6.07	□□□□□ -1.44
LAMA4-222	ENST00000604740	COL6A2	P12110	1019 aa		6.07	□□□□□ -1.44
LAMA4-222	ENST00000604740	C6	P13671	934 aa		6.07	□□□□□ -1.44
LAMA4-222	ENST00000604740	TUSC3	Q13454	348 aa		6.07	□□□□□ -1.44
LAMA4-222	ENST00000604740	CDSN	Q15517	529 aa		6.07	□□□□□ -1.44
LAMA4-222	ENST00000604740	KIZ	Q2M2Z5	673 aa		6.07	□□□□□ -1.44
LAMA4-222	ENST00000604740	SLFN13	Q68D06	897 aa		6.07	□□□□□ -1.44
LAMA4-222	ENST00000604740	KCNT2	Q6UVM3	1135 aa		6.07	□□□□□ -1.44
LAMA4-222	ENST00000604740	ANKS3	Q6ZW76	656 aa		6.07	□□□□□ -1.44
LAMA4-222	ENST00000604740	PALM2	Q8IXS6	379 aa		6.07	□□□□□ -1.44
LAMA4-222	ENST00000604740	SLC16A11	Q8NCK7	471 aa		6.07	□□□□□ -1.44
LAMA4-222	ENST00000604740	DCAF4	Q8WV16	495 aa		6.07	□□□□□ -1.44
LAMA4-222	ENST00000604740	CDK5RAP1	Q96SZ6	601 aa	Known RBP	6.07	□□□□□ -1.44
LAMA4-222	ENST00000604740	KCNJ15	Q99712	375 aa		6.07	□□□□□ -1.44
LAMA4-222	ENST00000604740	DEF6	Q9H4E7	631 aa		6.07	□□□□□ -1.44
LAMA4-222	ENST00000604740	ZFP69B	Q9UJL9	534 aa		6.07	□□□□□ -1.44
LAMA4-222	ENST00000604740	IQCA1L	A6NCM1	817 aa		6.06	□□□□□ -1.44
LAMA4-222	ENST00000604740	FAH	P16930	419 aa		6.06	□□□□□ -1.44
LAMA4-222	ENST00000604740	GLRB	P48167	497 aa		6.06	□□□□□ -1.44
LAMA4-222	ENST00000604740	SPIRE1	Q08AE8	756 aa		6.06	□□□□□ -1.44
LAMA4-222	ENST00000604740	SMAD2	Q15796	467 aa	Known RBP	6.06	□□□□□ -1.44
LAMA4-222	ENST00000604740	SKIDA1	Q1XH10	827 aa		6.06	□□□□□ -1.44
LAMA4-222	ENST00000604740	PAN2	Q504Q3	1202 aa	Known RBP	6.06	□□□□□ -1.44
LAMA4-222	ENST00000604740	LBX2	Q6XYB7	198 aa		6.06	□□□□□ -1.44
LAMA4-222	ENST00000604740	RALYL	Q86SE5	291 aa	Known RBP	6.06	□□□□□ -1.44

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