RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 H3BRB1 525 aa13.18□□□□□ -0.3
CCDC12-209ENST00000604164 HAS3O00219 553 aa13.18□□□□□ -0.3
CCDC12-209ENST00000604164 PARNO95453 639 aaKnown RBP13.18□□□□□ -0.3
CCDC12-209ENST00000604164 ZNF286BP0CG31 522 aa13.18□□□□□ -0.3
CCDC12-209ENST00000604164 GNAT1P11488 350 aa13.18□□□□□ -0.3
CCDC12-209ENST00000604164 ITGB5P18084 799 aa13.18□□□□□ -0.3
CCDC12-209ENST00000604164 CYP2C18P33260 490 aa13.18□□□□□ -0.3
CCDC12-209ENST00000604164 RFC2P35250 354 aa13.18□□□□□ -0.3
CCDC12-209ENST00000604164 SEMA3FQ13275 785 aa13.18□□□□□ -0.3
CCDC12-209ENST00000604164 SHHQ15465 462 aa13.18□□□□□ -0.3
CCDC12-209ENST00000604164 CEP55Q53EZ4 464 aa13.18□□□□□ -0.3
CCDC12-209ENST00000604164 GALNT17Q6IS24 598 aa13.18□□□□□ -0.3
CCDC12-209ENST00000604164 TNPO1Q92973 898 aaKnown RBP13.18□□□□□ -0.3
CCDC12-209ENST00000604164 GPR20Q99678 358 aa13.18□□□□□ -0.3
CCDC12-209ENST00000604164 SDF4Q9BRK5 362 aa13.18□□□□□ -0.3
CCDC12-209ENST00000604164 ALG1Q9BT22 464 aa13.18□□□□□ -0.3
CCDC12-209ENST00000604164 TUT1Q9H6E5 874 aaKnown RBP13.18□□□□□ -0.3
CCDC12-209ENST00000604164 IL23AQ9NPF7 189 aa13.18□□□□□ -0.3
CCDC12-209ENST00000604164 GTF2IRD1Q9UHL9 959 aa13.18□□□□□ -0.3
CCDC12-209ENST00000604164 SORBS3O60504 671 aa13.17□□□□□ -0.3
CCDC12-209ENST00000604164 LGALS2P05162 132 aa13.17□□□□□ -0.3
CCDC12-209ENST00000604164 CSF2RAP15509 400 aa13.17□□□□□ -0.3
CCDC12-209ENST00000604164 NLRP5P59047 1200 aa13.17□□□□□ -0.3
CCDC12-209ENST00000604164 ARHGAP4P98171 946 aa13.17□□□□□ -0.3
CCDC12-209ENST00000604164 SETQ01105 290 aaPredicted RBP13.17□□□□□ -0.3
CCDC12-209ENST00000604164 STK3Q13188 491 aa13.17□□□□□ -0.3
CCDC12-209ENST00000604164 SEPT1Q8WYJ6 367 aa13.17□□□□□ -0.3
CCDC12-209ENST00000604164 WASF1Q92558 559 aa13.17□□□□□ -0.3
CCDC12-209ENST00000604164 C16orf70Q9BSU1 422 aa13.17□□□□□ -0.3
CCDC12-209ENST00000604164 KCNH7Q9NS40 1196 aa13.17□□□□□ -0.3
CCDC12-209ENST00000604164 TRIOBPQ9H2D6 2365 aa13.17□□□□□ -0.3
CCDC12-209ENST00000604164 NFASCO94856 1347 aa13.16□□□□□ -0.3
CCDC12-209ENST00000604164 PFKFB2O60825 505 aa13.16□□□□□ -0.3
CCDC12-209ENST00000604164 FGBP02675 491 aa13.16□□□□□ -0.3
CCDC12-209ENST00000604164 CYP3A4P08684 503 aa13.16□□□□□ -0.3
CCDC12-209ENST00000604164 CYP2C9P11712 490 aa13.16□□□□□ -0.3
CCDC12-209ENST00000604164 KCNA2P16389 499 aa13.16□□□□□ -0.3
CCDC12-209ENST00000604164 NEK4P51957 841 aa13.16□□□□□ -0.3
CCDC12-209ENST00000604164 SMAD3P84022 425 aaKnown RBP13.16□□□□□ -0.3
CCDC12-209ENST00000604164 PTK7Q13308 1070 aa13.16□□□□□ -0.3
CCDC12-209ENST00000604164 C9orf50Q5SZB4 431 aa13.16□□□□□ -0.3
CCDC12-209ENST00000604164 JAKMIP3Q5VZ66 844 aa13.16□□□□□ -0.3
CCDC12-209ENST00000604164 IL27Q8NEV9 243 aa13.16□□□□□ -0.3
CCDC12-209ENST00000604164 AFAP1L1Q8TED9 768 aa13.16□□□□□ -0.3
CCDC12-209ENST00000604164 JPH1Q9HDC5 661 aaPredicted RBP13.16□□□□□ -0.3
CCDC12-209ENST00000604164 TMEM260Q9NX78 707 aa13.16□□□□□ -0.3
CCDC12-209ENST00000604164 HDAC6Q9UBN7 1215 aa13.16□□□□□ -0.3
CCDC12-209ENST00000604164 TCEAL9Q9UHQ7 104 aa13.16□□□□□ -0.3
CCDC12-209ENST00000604164 STK36Q9NRP7 1315 aa13.15□□□□□ -0.3
CCDC12-209ENST00000604164 C17orf102A2RUQ5 167 aa13.15□□□□□ -0.3
CCDC12-209ENST00000604164 MEIS1O00470 390 aa13.15□□□□□ -0.3
CCDC12-209ENST00000604164 ACTN1P12814 892 aa13.15□□□□□ -0.3
CCDC12-209ENST00000604164 AK2P54819 239 aa13.15□□□□□ -0.3
CCDC12-209ENST00000604164 CCL23P55773 120 aa13.15□□□□□ -0.3
CCDC12-209ENST00000604164 SP4Q02446 784 aa13.15□□□□□ -0.3
CCDC12-209ENST00000604164 FAM109BQ6ICB4 259 aaPredicted RBP13.15□□□□□ -0.3
CCDC12-209ENST00000604164 GDF6Q6KF10 455 aaPredicted RBP13.15□□□□□ -0.3
CCDC12-209ENST00000604164 PGBD1Q96JS3 809 aa13.15□□□□□ -0.3
CCDC12-209ENST00000604164 LARP6Q9BRS8 491 aaKnown RBP13.15□□□□□ -0.3
CCDC12-209ENST00000604164 SMARCAD1Q9H4L7 1026 aa13.15□□□□□ -0.3
CCDC12-209ENST00000604164 AZI2Q9H6S1 392 aa13.15□□□□□ -0.3
CCDC12-209ENST00000604164 UPF2Q9HAU5 1272 aaKnown RBP13.15□□□□□ -0.3
CCDC12-209ENST00000604164 ERAP1Q9NZ08 941 aa13.15□□□□□ -0.3
CCDC12-209ENST00000604164 VPS54Q9P1Q0 977 aa13.15□□□□□ -0.3
CCDC12-209ENST00000604164 SLC9A2Q9UBY0 812 aa13.15□□□□□ -0.3
CCDC12-209ENST00000604164 TPCN1Q9ULQ1 816 aa13.15□□□□□ -0.3
CCDC12-209ENST00000604164 PCDHA4Q9UN74 947 aa13.15□□□□□ -0.3
CCDC12-209ENST00000604164 MYH7BA7E2Y1 1941 aa13.14□□□□□ -0.31
CCDC12-209ENST00000604164 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.14□□□□□ -0.31
CCDC12-209ENST00000604164 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.14□□□□□ -0.31
CCDC12-209ENST00000604164 SOX1O00570 391 aaPredicted RBP13.14□□□□□ -0.31
CCDC12-209ENST00000604164 ATP9AO75110 1047 aa13.14□□□□□ -0.31
CCDC12-209ENST00000604164 TCF7P36402 384 aaPredicted RBP13.14□□□□□ -0.31
CCDC12-209ENST00000604164 USP11P51784 963 aa13.14□□□□□ -0.31
CCDC12-209ENST00000604164 EPHB4P54760 987 aa13.14□□□□□ -0.31
CCDC12-209ENST00000604164 RBL2Q08999 1139 aa13.14□□□□□ -0.31
CCDC12-209ENST00000604164 SCRN1Q12765 414 aa13.14□□□□□ -0.31
CCDC12-209ENST00000604164 TMEM240Q5SV17 173 aa13.14□□□□□ -0.31
CCDC12-209ENST00000604164 UTP14CQ5TAP6 766 aaKnown RBP13.14□□□□□ -0.31
CCDC12-209ENST00000604164 ZNF365Q70YC5 407 aa13.14□□□□□ -0.31
CCDC12-209ENST00000604164 PLA2G4DQ86XP0 818 aa13.14□□□□□ -0.31
CCDC12-209ENST00000604164 DAGLBQ8NCG7 672 aa13.14□□□□□ -0.31
CCDC12-209ENST00000604164 HERVK_113Q902F9 699 aa13.14□□□□□ -0.31
CCDC12-209ENST00000604164 GLG1Q92896 1179 aa13.14□□□□□ -0.31
CCDC12-209ENST00000604164 LRCH3Q96II8 777 aa13.14□□□□□ -0.31
CCDC12-209ENST00000604164 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.14□□□□□ -0.319e-16■□□□□ 8.1
CCDC12-209ENST00000604164 WNT8AQ9H1J5 351 aa13.14□□□□□ -0.31
CCDC12-209ENST00000604164 AGO4Q9HCK5 861 aaKnown RBP13.14□□□□□ -0.31
CCDC12-209ENST00000604164 NRCAMQ92823 1304 aa13.13□□□□□ -0.31
CCDC12-209ENST00000604164 CAND2O75155 1236 aa13.13□□□□□ -0.31
CCDC12-209ENST00000604164 RPLP2P05387 115 aaKnown RBP13.13□□□□□ -0.31
CCDC12-209ENST00000604164 IQCF3P0C7M6 154 aa13.13□□□□□ -0.31
CCDC12-209ENST00000604164 SMIM10L2AP0DMW4 78 aa13.13□□□□□ -0.31
CCDC12-209ENST00000604164 SMIM10L2BP0DMW5 78 aa13.13□□□□□ -0.31
CCDC12-209ENST00000604164 SELPP16109 830 aa13.13□□□□□ -0.31
CCDC12-209ENST00000604164 CIITAP33076 1130 aa13.13□□□□□ -0.31
CCDC12-209ENST00000604164 BLIDQ8IZY5 108 aa13.13□□□□□ -0.31
CCDC12-209ENST00000604164 CRYGNQ8WXF5 182 aa13.13□□□□□ -0.31
CCDC12-209ENST00000604164 ATP6V0A1Q93050 837 aa13.13□□□□□ -0.31
CCDC12-209ENST00000604164 TBC1D22BQ9NU19 505 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms