RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 PPP4CP60510 307 aa16.89■□□□□ 0.29
PPFIA3-206ENST00000602655 METTL16Q86W50 562 aaKnown RBP16.89■□□□□ 0.29
PPFIA3-206ENST00000602655 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.89■□□□□ 0.29
PPFIA3-206ENST00000602655 SERTAD1Q9UHV2 236 aa16.89■□□□□ 0.29
PPFIA3-206ENST00000602655 TUBE1Q9UJT0 475 aa16.89■□□□□ 0.29
PPFIA3-206ENST00000602655 USP17L10C9JJH3 530 aa16.89■□□□□ 0.29
PPFIA3-206ENST00000602655 MFAP3LO75121 409 aa16.89■□□□□ 0.29
PPFIA3-206ENST00000602655 EEF2P13639 858 aaKnown RBP16.89■□□□□ 0.29
PPFIA3-206ENST00000602655 MYCBPAPQ8TBZ2 947 aa16.89■□□□□ 0.29
PPFIA3-206ENST00000602655 CXCL9Q07325 125 aa16.89■□□□□ 0.29
PPFIA3-206ENST00000602655 SLC39A14Q15043 492 aa16.89■□□□□ 0.29
PPFIA3-206ENST00000602655 TTMPQ5BVD1 217 aa16.89■□□□□ 0.29
PPFIA3-206ENST00000602655 CYP26C1Q6V0L0 522 aa16.89■□□□□ 0.29
PPFIA3-206ENST00000602655 HOMEZQ8IX15 550 aa16.89■□□□□ 0.29
PPFIA3-206ENST00000602655 PCMTD1Q96MG8 357 aaPredicted RBP16.89■□□□□ 0.29
PPFIA3-206ENST00000602655 DMGDHQ9UI17 866 aaKnown RBP16.89■□□□□ 0.29
PPFIA3-206ENST00000602655 MAN1B1Q9UKM7 699 aa16.89■□□□□ 0.29
PPFIA3-206ENST00000602655 FAM205AQ6ZU69 1335 aa16.88■□□□□ 0.29
PPFIA3-206ENST00000602655 SLC35G1Q2M3R5 365 aa16.88■□□□□ 0.29
PPFIA3-206ENST00000602655 SH3GL2Q99962 352 aa16.88■□□□□ 0.29
PPFIA3-206ENST00000602655 RNF26Q9BY78 433 aaPredicted RBP16.88■□□□□ 0.29
PPFIA3-206ENST00000602655 ZCWPW1Q9H0M4 648 aa16.88■□□□□ 0.29
PPFIA3-206ENST00000602655 HOMER2Q9NSB8 354 aa16.88■□□□□ 0.29
PPFIA3-206ENST00000602655 EPN1Q9Y6I3 576 aaPredicted RBP16.88■□□□□ 0.29
PPFIA3-206ENST00000602655 SMIM24O75264 130 aa16.88■□□□□ 0.29
PPFIA3-206ENST00000602655 SBK1Q52WX2 424 aa16.88■□□□□ 0.29
PPFIA3-206ENST00000602655 TTC38Q5R3I4 469 aa16.88■□□□□ 0.29
PPFIA3-206ENST00000602655 STRIP1Q5VSL9 837 aa16.88■□□□□ 0.29
PPFIA3-206ENST00000602655 CCDC174Q6PII3 467 aa16.88■□□□□ 0.29
PPFIA3-206ENST00000602655 CHP1Q99653 195 aa16.88■□□□□ 0.29
PPFIA3-206ENST00000602655 LRRC1Q9BTT6 524 aa16.88■□□□□ 0.29
PPFIA3-206ENST00000602655 FAM198AQ9UFP1 575 aa16.88■□□□□ 0.29
PPFIA3-206ENST00000602655 MAD2L2Q9UI95 211 aa16.88■□□□□ 0.29
PPFIA3-206ENST00000602655 USP17L15C9J2P7 530 aa16.87■□□□□ 0.29
PPFIA3-206ENST00000602655 USP17L13C9JLJ4 530 aa16.87■□□□□ 0.29
PPFIA3-206ENST00000602655 USP17L11C9JVI0 530 aa16.87■□□□□ 0.29
PPFIA3-206ENST00000602655 USP17L18D6R9N7 530 aa16.87■□□□□ 0.29
PPFIA3-206ENST00000602655 USP17L22D6RA61 530 aa16.87■□□□□ 0.29
PPFIA3-206ENST00000602655 USP17L17D6RBQ6 530 aa16.87■□□□□ 0.29
PPFIA3-206ENST00000602655 USP17L19D6RCP7 530 aa16.87■□□□□ 0.29
PPFIA3-206ENST00000602655 USP17L20D6RJB6 530 aa16.87■□□□□ 0.29
PPFIA3-206ENST00000602655 CCNT1O60563 726 aaKnown RBP16.87■□□□□ 0.29
PPFIA3-206ENST00000602655 CALM1P0DP23 149 aa16.87■□□□□ 0.29
PPFIA3-206ENST00000602655 CALM2P0DP24 149 aa16.87■□□□□ 0.29
PPFIA3-206ENST00000602655 CALM3P0DP25 149 aa16.87■□□□□ 0.29
PPFIA3-206ENST00000602655 ICA1Q05084 483 aa16.87■□□□□ 0.29
PPFIA3-206ENST00000602655 USP17L24Q0WX57 530 aa16.87■□□□□ 0.29
PPFIA3-206ENST00000602655 NR1I3Q14994 352 aa16.87■□□□□ 0.29
PPFIA3-206ENST00000602655 TRIM68Q6AZZ1 485 aa16.87■□□□□ 0.29
PPFIA3-206ENST00000602655 USP17L6PQ6QN14 398 aa16.87■□□□□ 0.29
PPFIA3-206ENST00000602655 CPXCR1Q8N123 301 aa16.87■□□□□ 0.29
PPFIA3-206ENST00000602655 KRI1Q8N9T8 703 aaKnown RBP16.87■□□□□ 0.29
PPFIA3-206ENST00000602655 C3orf20Q8ND61 904 aa16.87■□□□□ 0.29
PPFIA3-206ENST00000602655 TATDN2Q93075 761 aa16.87■□□□□ 0.29
PPFIA3-206ENST00000602655 PKD2L1Q9P0L9 805 aa16.87■□□□□ 0.29
PPFIA3-206ENST00000602655 KLRG2A4D1S0 409 aaPredicted RBP16.87■□□□□ 0.29
PPFIA3-206ENST00000602655 CXCR5P32302 372 aa16.87■□□□□ 0.29
PPFIA3-206ENST00000602655 GPIHBP1Q8IV16 184 aa16.87■□□□□ 0.29
PPFIA3-206ENST00000602655 ACTR5Q9H9F9 607 aaPredicted RBP16.87■□□□□ 0.29
PPFIA3-206ENST00000602655 NOD2Q9HC29 1040 aa16.87■□□□□ 0.29
PPFIA3-206ENST00000602655 CNTNAP5Q8WYK1 1306 aa16.87■□□□□ 0.29
PPFIA3-206ENST00000602655 NHSQ6T4R5 1651 aa16.87■□□□□ 0.29
PPFIA3-206ENST00000602655 PECAM1P16284 738 aaPredicted RBP16.87■□□□□ 0.29
PPFIA3-206ENST00000602655 BMP6P22004 513 aa16.87■□□□□ 0.29
PPFIA3-206ENST00000602655 POSTNQ15063 836 aa16.87■□□□□ 0.29
PPFIA3-206ENST00000602655 C16orf86Q6ZW13 317 aa16.87■□□□□ 0.29
PPFIA3-206ENST00000602655 TXKP42681 527 aa16.86■□□□□ 0.29
PPFIA3-206ENST00000602655 VAV2P52735 878 aa16.86■□□□□ 0.29
PPFIA3-206ENST00000602655 JAG1P78504 1218 aa16.86■□□□□ 0.29
PPFIA3-206ENST00000602655 PTGISQ16647 500 aa16.86■□□□□ 0.29
PPFIA3-206ENST00000602655 SH3BP5LQ7L8J4 393 aa16.86■□□□□ 0.29
PPFIA3-206ENST00000602655 TBC1D1Q86TI0 1168 aaPredicted RBP16.86■□□□□ 0.29
PPFIA3-206ENST00000602655 FAM228AQ86W67 206 aa16.86■□□□□ 0.29
PPFIA3-206ENST00000602655 MLKLQ8NB16 471 aa16.86■□□□□ 0.29
PPFIA3-206ENST00000602655 TSEN2Q8NCE0 465 aaKnown RBP16.86■□□□□ 0.29
PPFIA3-206ENST00000602655 ZIM3Q96PE6 472 aa16.86■□□□□ 0.29
PPFIA3-206ENST00000602655 TAOK3Q9H2K8 898 aa16.86■□□□□ 0.29
PPFIA3-206ENST00000602655 MTMR4Q9NYA4 1195 aa16.86■□□□□ 0.29
PPFIA3-206ENST00000602655 RPS6KA3P51812 740 aa16.86■□□□□ 0.29
PPFIA3-206ENST00000602655 CACNA2D3Q8IZS8 1091 aa16.86■□□□□ 0.29
PPFIA3-206ENST00000602655 ACER1Q8TDN7 264 aa16.86■□□□□ 0.29
PPFIA3-206ENST00000602655 PRPF3O43395 683 aaKnown RBP16.86■□□□□ 0.29
PPFIA3-206ENST00000602655 DIAPH2O60879 1101 aa16.86■□□□□ 0.29
PPFIA3-206ENST00000602655 ANP32DO95626 131 aa16.86■□□□□ 0.29
PPFIA3-206ENST00000602655 SHMT1P34896 483 aa16.86■□□□□ 0.29
PPFIA3-206ENST00000602655 STYK1Q6J9G0 422 aa16.86■□□□□ 0.29
PPFIA3-206ENST00000602655 TMC4Q7Z404 712 aa16.86■□□□□ 0.29
PPFIA3-206ENST00000602655 DGKHQ86XP1 1220 aa16.86■□□□□ 0.29
PPFIA3-206ENST00000602655 BLIDQ8IZY5 108 aa16.86■□□□□ 0.29
PPFIA3-206ENST00000602655 COL5A3P25940 1745 aaPredicted RBP16.85■□□□□ 0.29
PPFIA3-206ENST00000602655 HOXA13P31271 388 aaPredicted RBP16.85■□□□□ 0.29
PPFIA3-206ENST00000602655 ABCB5Q2M3G0 1257 aa16.85■□□□□ 0.29
PPFIA3-206ENST00000602655 SLC30A9Q6PML9 568 aa16.85■□□□□ 0.29
PPFIA3-206ENST00000602655 NEDD1Q8NHV4 660 aa16.85■□□□□ 0.29
PPFIA3-206ENST00000602655 ENOX1Q8TC92 643 aaKnown RBP16.85■□□□□ 0.29
PPFIA3-206ENST00000602655 GLIS2Q9BZE0 524 aaPredicted RBP16.85■□□□□ 0.29
PPFIA3-206ENST00000602655 DNAJC18Q9H819 358 aa16.85■□□□□ 0.29
PPFIA3-206ENST00000602655 SMARCAL1Q9NZC9 954 aa16.85■□□□□ 0.29
PPFIA3-206ENST00000602655 TRPC6Q9Y210 931 aa16.85■□□□□ 0.29
PPFIA3-206ENST00000602655 DNM1LO00429 736 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms