RNA–Protein interactions for RNA: ENST00000602619.1

SGMS1-207, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-207ENST00000602619 PPIL6Q8IXY8 311 aa4.28□□□□□ -1.72
SGMS1-207ENST00000602619 ZSWIM2Q8NEG5 633 aa4.28□□□□□ -1.72
SGMS1-207ENST00000602619 SMARCC2Q8TAQ2 1214 aa4.28□□□□□ -1.72
SGMS1-207ENST00000602619 DCAF4Q8WV16 495 aa4.28□□□□□ -1.72
SGMS1-207ENST00000602619 ALG3Q92685 438 aa4.28□□□□□ -1.72
SGMS1-207ENST00000602619 CDIP1Q9H305 208 aa4.28□□□□□ -1.72
SGMS1-207ENST00000602619 GPR27Q9NS67 375 aa4.28□□□□□ -1.72
SGMS1-207ENST00000602619 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.28□□□□□ -1.72
SGMS1-207ENST00000602619 USP35Q9P2H5 1018 aa4.28□□□□□ -1.72
SGMS1-207ENST00000602619 PFDN2Q9UHV9 154 aa4.28□□□□□ -1.72
SGMS1-207ENST00000602619 ING1Q9UK53 422 aaPredicted RBP4.28□□□□□ -1.72
SGMS1-207ENST00000602619 DBR1Q9UK59 544 aaKnown RBP4.28□□□□□ -1.72
SGMS1-207ENST00000602619 TRBV23-1A0A0A0MS06 115 aa4.27□□□□□ -1.73
SGMS1-207ENST00000602619 PRODHO43272 600 aa4.27□□□□□ -1.73
SGMS1-207ENST00000602619 PPP1R11O60927 126 aaPredicted RBP4.27□□□□□ -1.73
SGMS1-207ENST00000602619 GLI4P10075 376 aa4.27□□□□□ -1.73
SGMS1-207ENST00000602619 ECI1P42126 302 aa4.27□□□□□ -1.73
SGMS1-207ENST00000602619 GTF2A2P52657 109 aa4.27□□□□□ -1.73
SGMS1-207ENST00000602619 KIAA2012Q0VF49 1180 aa4.27□□□□□ -1.73
SGMS1-207ENST00000602619 RGL3Q3MIN7 710 aa4.27□□□□□ -1.73
SGMS1-207ENST00000602619 GLB1LQ6UWU2 654 aa4.27□□□□□ -1.73
SGMS1-207ENST00000602619 MAMDC2Q7Z304 686 aaPredicted RBP4.27□□□□□ -1.73
SGMS1-207ENST00000602619 JAZF1Q86VZ6 243 aa4.27□□□□□ -1.73
SGMS1-207ENST00000602619 RIOX2Q8IUF8 465 aa4.27□□□□□ -1.73
SGMS1-207ENST00000602619 SYNPOQ8N3V7 929 aa4.27□□□□□ -1.73
SGMS1-207ENST00000602619 RCBTB1Q8NDN9 531 aa4.27□□□□□ -1.73
SGMS1-207ENST00000602619 GSTCDQ8NEC7 633 aa4.27□□□□□ -1.73
SGMS1-207ENST00000602619 PLEKHO2Q8TD55 490 aa4.27□□□□□ -1.73
SGMS1-207ENST00000602619 DPF3Q92784 378 aa4.27□□□□□ -1.73
SGMS1-207ENST00000602619 DIO2Q92813 273 aa4.27□□□□□ -1.73
SGMS1-207ENST00000602619 ZBTB8AQ96BR9 441 aa4.27□□□□□ -1.73
SGMS1-207ENST00000602619 RNPC3Q96LT9 517 aaKnown RBP4.27□□□□□ -1.73
SGMS1-207ENST00000602619 DHRS4Q9BTZ2 278 aa4.27□□□□□ -1.73
SGMS1-207ENST00000602619 RXFP1Q9HBX9 757 aa4.27□□□□□ -1.73
SGMS1-207ENST00000602619 FBLN5Q9UBX5 448 aa4.27□□□□□ -1.73
SGMS1-207ENST00000602619 MRPS23Q9Y3D9 190 aaKnown RBP4.27□□□□□ -1.73
SGMS1-207ENST00000602619 TBX22Q9Y458 520 aa4.27□□□□□ -1.73
SGMS1-207ENST00000602619 PTCH2Q9Y6C5 1203 aa4.27□□□□□ -1.73
SGMS1-207ENST00000602619 X6R8D5 127 aa4.27□□□□□ -1.73
SGMS1-207ENST00000602619 ZNF536O15090 1300 aa4.26□□□□□ -1.73
SGMS1-207ENST00000602619 H7BY64 318 aa4.26□□□□□ -1.73
SGMS1-207ENST00000602619 ENPP3O14638 875 aa4.26□□□□□ -1.73
SGMS1-207ENST00000602619 WNT9AO14904 365 aa4.26□□□□□ -1.73
SGMS1-207ENST00000602619 NPHS1O60500 1241 aa4.26□□□□□ -1.73
SGMS1-207ENST00000602619 TACR1P25103 407 aa4.26□□□□□ -1.73
SGMS1-207ENST00000602619 SMAD4Q13485 552 aaKnown RBP4.26□□□□□ -1.73
SGMS1-207ENST00000602619 ICAM4Q14773 271 aa4.26□□□□□ -1.73
SGMS1-207ENST00000602619 FAM209AQ5JX71 171 aa4.26□□□□□ -1.73
SGMS1-207ENST00000602619 NLRP10Q86W26 655 aa4.26□□□□□ -1.73
SGMS1-207ENST00000602619 LGI4Q8N135 537 aa4.26□□□□□ -1.73
SGMS1-207ENST00000602619 LINC00482Q8N8I6 264 aa4.26□□□□□ -1.73
SGMS1-207ENST00000602619 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.26□□□□□ -1.739e-6■□□□□ 8.6
SGMS1-207ENST00000602619 SH3TC2Q8TF17 1288 aa4.26□□□□□ -1.73
SGMS1-207ENST00000602619 MRPL4Q9BYD3 311 aaKnown RBP4.26□□□□□ -1.73
SGMS1-207ENST00000602619 KLC2Q9H0B6 622 aa4.26□□□□□ -1.73
SGMS1-207ENST00000602619 KCNJ6P48051 423 aa4.25□□□□□ -1.73
SGMS1-207ENST00000602619 SLC6A11P48066 632 aa4.25□□□□□ -1.73
SGMS1-207ENST00000602619 GABREP78334 506 aa4.25□□□□□ -1.73
SGMS1-207ENST00000602619 ASXL2Q76L83 1435 aa4.25□□□□□ -1.73
SGMS1-207ENST00000602619 CPNE8Q86YQ8 564 aa4.25□□□□□ -1.73
SGMS1-207ENST00000602619 LZTR1Q8N653 840 aa4.25□□□□□ -1.73
SGMS1-207ENST00000602619 NETO2Q8NC67 525 aa4.25□□□□□ -1.73
SGMS1-207ENST00000602619 CPA5Q8WXQ8 436 aa4.25□□□□□ -1.73
SGMS1-207ENST00000602619 PTPRN2Q92932 1015 aa4.25□□□□□ -1.73
SGMS1-207ENST00000602619 KANSL2Q9H9L4 492 aa4.25□□□□□ -1.73
SGMS1-207ENST00000602619 NCOA5Q9HCD5 579 aaKnown RBP4.25□□□□□ -1.73
SGMS1-207ENST00000602619 CD248Q9HCU0 757 aa4.25□□□□□ -1.73
SGMS1-207ENST00000602619 FBXL7Q9UJT9 491 aa4.25□□□□□ -1.73
SGMS1-207ENST00000602619 TIMM13Q9Y5L4 95 aaPredicted RBP4.25□□□□□ -1.73
SGMS1-207ENST00000602619 MROH6A6NGR9 719 aa4.24□□□□□ -1.73
SGMS1-207ENST00000602619 PLD2O14939 933 aa4.24□□□□□ -1.73
SGMS1-207ENST00000602619 LCP1P13796 627 aa4.24□□□□□ -1.73
SGMS1-207ENST00000602619 GPR85P60893 370 aa4.24□□□□□ -1.73
SGMS1-207ENST00000602619 RPL11P62913 178 aaKnown RBP4.24□□□□□ -1.73
SGMS1-207ENST00000602619 CACNB2Q08289 660 aaPredicted RBP4.24□□□□□ -1.73
SGMS1-207ENST00000602619 MROH9Q5TGP6 573 aa4.24□□□□□ -1.73
SGMS1-207ENST00000602619 WWC2Q6AWC2 1192 aa4.24□□□□□ -1.73
SGMS1-207ENST00000602619 LBX2Q6XYB7 198 aa4.24□□□□□ -1.73
SGMS1-207ENST00000602619 DDX11Q96FC9 970 aa4.24□□□□□ -1.73
SGMS1-207ENST00000602619 TSPAN17Q96FV3 270 aa4.24□□□□□ -1.73
SGMS1-207ENST00000602619 CDC6Q99741 560 aa4.24□□□□□ -1.73
SGMS1-207ENST00000602619 PHF20Q9BVI0 1012 aa4.24□□□□□ -1.73
SGMS1-207ENST00000602619 PPP4R1LQ9P1A2 415 aa4.24□□□□□ -1.73
SGMS1-207ENST00000602619 ARVCFO00192 962 aa4.23□□□□□ -1.73
SGMS1-207ENST00000602619 AQP7O14520 342 aa4.23□□□□□ -1.73
SGMS1-207ENST00000602619 SMARCA5O60264 1052 aaPredicted RBP4.23□□□□□ -1.73
SGMS1-207ENST00000602619 MSCO60682 206 aa4.23□□□□□ -1.73
SGMS1-207ENST00000602619 EFCAB14O75071 495 aa4.23□□□□□ -1.73
SGMS1-207ENST00000602619 RFPL3O75679 317 aa4.23□□□□□ -1.73
SGMS1-207ENST00000602619 LSAMPQ13449 338 aa4.23□□□□□ -1.73
SGMS1-207ENST00000602619 KIZQ2M2Z5 673 aa4.23□□□□□ -1.73
SGMS1-207ENST00000602619 FNDC3BQ53EP0 1204 aaKnown RBP4.23□□□□□ -1.73
SGMS1-207ENST00000602619 EMC4Q5J8M3 183 aa4.23□□□□□ -1.73
SGMS1-207ENST00000602619 HABP4Q5JVS0 413 aaKnown RBP4.23□□□□□ -1.73
SGMS1-207ENST00000602619 MCTP2Q6DN12 878 aa4.23□□□□□ -1.73
SGMS1-207ENST00000602619 ZNF585AQ6P3V2 769 aa4.23□□□□□ -1.73
SGMS1-207ENST00000602619 GIMAP6Q6P9H5 292 aa4.23□□□□□ -1.73
SGMS1-207ENST00000602619 USP53Q70EK8 1073 aa4.23□□□□□ -1.73
SGMS1-207ENST00000602619 KIAA0907Q7Z7F0 614 aaPredicted RBP4.23□□□□□ -1.73
SGMS1-207ENST00000602619 IFNL3Q8IZI9 196 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms