RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 C4orf50Q6ZRC1 276 aa9.39□□□□□ -0.91
CSMD1-216ENST00000602557 CCDC127Q96BQ5 260 aa9.39□□□□□ -0.91
CSMD1-216ENST00000602557 CFAP36Q96G28 342 aa9.39□□□□□ -0.91
CSMD1-216ENST00000602557 LONP2Q86WA8 852 aa9.39□□□□□ -0.91
CSMD1-216ENST00000602557 ENOX1Q8TC92 643 aaKnown RBP9.39□□□□□ -0.91
CSMD1-216ENST00000602557 GJA10Q969M2 543 aa9.39□□□□□ -0.91
CSMD1-216ENST00000602557 DONSONQ9NYP3 566 aa9.39□□□□□ -0.91
CSMD1-216ENST00000602557 IFRD2Q12894 506 aaPredicted RBP9.39□□□□□ -0.91
CSMD1-216ENST00000602557 PPME1Q9Y570 386 aa9.39□□□□□ -0.91
CSMD1-216ENST00000602557 CARMIL3Q8ND23 1372 aa9.39□□□□□ -0.91
CSMD1-216ENST00000602557 SPDYE16A6NNV3 312 aaPredicted RBP9.39□□□□□ -0.91
CSMD1-216ENST00000602557 PFKFB2O60825 505 aa9.39□□□□□ -0.91
CSMD1-216ENST00000602557 CYTH1Q15438 398 aa9.39□□□□□ -0.91
CSMD1-216ENST00000602557 SPDYE2Q495Y8 402 aa9.39□□□□□ -0.91
CSMD1-216ENST00000602557 CLIC4Q9Y696 253 aa9.39□□□□□ -0.91
CSMD1-216ENST00000602557 PZPP20742 1482 aa9.39□□□□□ -0.91
CSMD1-216ENST00000602557 MYOM2P54296 1465 aa9.39□□□□□ -0.91
CSMD1-216ENST00000602557 URB1O60287 2271 aaKnown RBP9.39□□□□□ -0.91
CSMD1-216ENST00000602557 GTPBP6O43824 516 aaPredicted RBP9.39□□□□□ -0.91
CSMD1-216ENST00000602557 ABL1P00519 1130 aa9.39□□□□□ -0.91
CSMD1-216ENST00000602557 SMYD4Q8IYR2 804 aaPredicted RBP9.39□□□□□ -0.91
CSMD1-216ENST00000602557 TMCO5AQ8N6Q1 288 aa9.39□□□□□ -0.91
CSMD1-216ENST00000602557 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.39□□□□□ -0.91
CSMD1-216ENST00000602557 FIS1Q9Y3D6 152 aa9.39□□□□□ -0.91
CSMD1-216ENST00000602557 CORO7P57737 925 aa9.38□□□□□ -0.91
CSMD1-216ENST00000602557 SLFN12Q8IYM2 578 aa9.38□□□□□ -0.91
CSMD1-216ENST00000602557 USP40Q9NVE5 1235 aa9.38□□□□□ -0.91
CSMD1-216ENST00000602557 BAG5Q9UL15 447 aa9.38□□□□□ -0.91
CSMD1-216ENST00000602557 SYNMO15061 1565 aa9.38□□□□□ -0.91
CSMD1-216ENST00000602557 TMEM232C9JQI7 657 aa9.38□□□□□ -0.91
CSMD1-216ENST00000602557 CAPN9O14815 690 aa9.38□□□□□ -0.91
CSMD1-216ENST00000602557 ZMYND12Q9H0C1 365 aa9.38□□□□□ -0.91
CSMD1-216ENST00000602557 SCG2P13521 617 aa9.38□□□□□ -0.91
CSMD1-216ENST00000602557 FAM135BQ49AJ0 1406 aa9.38□□□□□ -0.91
CSMD1-216ENST00000602557 GOLGA8HP0CJ92 632 aa9.38□□□□□ -0.91
CSMD1-216ENST00000602557 CMA1P23946 247 aa9.38□□□□□ -0.91
CSMD1-216ENST00000602557 PTGDRQ13258 359 aa9.38□□□□□ -0.91
CSMD1-216ENST00000602557 DDX17Q92841 729 aaKnown RBP9.38□□□□□ -0.91
CSMD1-216ENST00000602557 HDAC11Q96DB2 347 aa9.38□□□□□ -0.91
CSMD1-216ENST00000602557 TRPV6Q9H1D0 765 aa9.38□□□□□ -0.91
CSMD1-216ENST00000602557 AP1G2O75843 785 aa9.38□□□□□ -0.91
CSMD1-216ENST00000602557 NSFP46459 744 aaKnown RBP9.38□□□□□ -0.91
CSMD1-216ENST00000602557 BCAMP50895 628 aa9.38□□□□□ -0.91
CSMD1-216ENST00000602557 SPOUT1Q5T280 376 aaKnown RBP9.38□□□□□ -0.91
CSMD1-216ENST00000602557 TM6SF1Q9BZW5 370 aa9.38□□□□□ -0.91
CSMD1-216ENST00000602557 ADD1P35611 737 aaKnown RBP9.38□□□□□ -0.91
CSMD1-216ENST00000602557 TSTA3Q13630 321 aaPredicted RBP9.38□□□□□ -0.91
CSMD1-216ENST00000602557 OLFML1Q6UWY5 402 aa9.38□□□□□ -0.91
CSMD1-216ENST00000602557 SMCR8Q8TEV9 937 aaPredicted RBP9.38□□□□□ -0.91
CSMD1-216ENST00000602557 TEKT4Q8WW24 435 aa9.38□□□□□ -0.91
CSMD1-216ENST00000602557 ZNF653Q96CK0 615 aa9.38□□□□□ -0.91
CSMD1-216ENST00000602557 FAM161BQ96MY7 647 aa9.38□□□□□ -0.91
CSMD1-216ENST00000602557 EFHD1Q9BUP0 239 aa9.38□□□□□ -0.91
CSMD1-216ENST00000602557 ASCC2Q9H1I8 757 aaPredicted RBP9.38□□□□□ -0.91
CSMD1-216ENST00000602557 SUGCTQ9HAC7 445 aa9.38□□□□□ -0.91
CSMD1-216ENST00000602557 TBC1D23Q9NUY8 699 aa9.38□□□□□ -0.91
CSMD1-216ENST00000602557 ARHGAP10A1A4S6 786 aa9.38□□□□□ -0.91
CSMD1-216ENST00000602557 USP17L12C9JPN9 530 aa9.38□□□□□ -0.91
CSMD1-216ENST00000602557 USP17L21D6R901 530 aa9.38□□□□□ -0.91
CSMD1-216ENST00000602557 KCNA6P17658 529 aa9.38□□□□□ -0.91
CSMD1-216ENST00000602557 ICA1LQ8NDH6 482 aa9.38□□□□□ -0.91
CSMD1-216ENST00000602557 B4GALNT2Q8NHY0 566 aa9.38□□□□□ -0.91
CSMD1-216ENST00000602557 TYW1Q9NV66 732 aaKnown RBP9.38□□□□□ -0.91
CSMD1-216ENST00000602557 DLGAP2Q9P1A6 1054 aa9.38□□□□□ -0.91
CSMD1-216ENST00000602557 LMTK3Q96Q04 1460 aa9.38□□□□□ -0.91
CSMD1-216ENST00000602557 NIM1KQ8IY84 436 aa9.38□□□□□ -0.91
CSMD1-216ENST00000602557 FANCBQ8NB91 859 aa9.38□□□□□ -0.91
CSMD1-216ENST00000602557 BABAM1Q9NWV8 329 aa9.38□□□□□ -0.91
CSMD1-216ENST00000602557 GMNCA6NCL1 334 aa9.38□□□□□ -0.91
CSMD1-216ENST00000602557 GNGT2O14610 69 aa9.38□□□□□ -0.91
CSMD1-216ENST00000602557 ECE1P42892 770 aa9.38□□□□□ -0.91
CSMD1-216ENST00000602557 SCNN1DP51172 638 aa9.38□□□□□ -0.91
CSMD1-216ENST00000602557 MYL7Q01449 175 aa9.38□□□□□ -0.91
CSMD1-216ENST00000602557 HOOK2Q96ED9 719 aa9.38□□□□□ -0.91
CSMD1-216ENST00000602557 ZNF274Q96GC6 653 aaPredicted RBP9.38□□□□□ -0.91
CSMD1-216ENST00000602557 ZNF496Q96IT1 587 aaPredicted RBP9.38□□□□□ -0.91
CSMD1-216ENST00000602557 RMI1Q9H9A7 625 aa9.38□□□□□ -0.91
CSMD1-216ENST00000602557 ABCC4O15439 1325 aa9.38□□□□□ -0.91
CSMD1-216ENST00000602557 SHROOM2Q13796 1616 aa9.38□□□□□ -0.91
CSMD1-216ENST00000602557 POLR1AO95602 1720 aaPredicted RBP9.37□□□□□ -0.91
CSMD1-216ENST00000602557 HSPD1P10809 573 aaKnown RBP9.37□□□□□ -0.91
CSMD1-216ENST00000602557 UBE3AQ05086 875 aa9.37□□□□□ -0.91
CSMD1-216ENST00000602557 XKR9Q5GH70 373 aa9.37□□□□□ -0.91
CSMD1-216ENST00000602557 KIF2BQ8N4N8 673 aa9.37□□□□□ -0.91
CSMD1-216ENST00000602557 SYT2Q8N9I0 419 aaPredicted RBP9.37□□□□□ -0.91
CSMD1-216ENST00000602557 PNMA1Q8ND90 353 aa9.37□□□□□ -0.91
CSMD1-216ENST00000602557 GYG1P46976 350 aa9.37□□□□□ -0.91
CSMD1-216ENST00000602557 SCRN1Q12765 414 aa9.37□□□□□ -0.91
CSMD1-216ENST00000602557 ADAM9Q13443 819 aa9.37□□□□□ -0.91
CSMD1-216ENST00000602557 TBC1D22AQ8WUA7 517 aa9.37□□□□□ -0.91
CSMD1-216ENST00000602557 ETNK1Q9HBU6 452 aa9.37□□□□□ -0.91
CSMD1-216ENST00000602557 BFSP1Q12934 665 aa9.37□□□□□ -0.91
CSMD1-216ENST00000602557 RINT1Q6NUQ1 792 aa9.37□□□□□ -0.91
CSMD1-216ENST00000602557 GRAMD1CQ8IYS0 662 aa9.37□□□□□ -0.91
CSMD1-216ENST00000602557 SH3GL1Q99961 368 aa9.37□□□□□ -0.91
CSMD1-216ENST00000602557 PCDHA12Q9UN75 941 aa9.37□□□□□ -0.91
CSMD1-216ENST00000602557 TNKSO95271 1327 aa9.37□□□□□ -0.91
CSMD1-216ENST00000602557 OATP04181 439 aa9.37□□□□□ -0.91
CSMD1-216ENST00000602557 SLC12A1Q13621 1099 aa9.37□□□□□ -0.91
CSMD1-216ENST00000602557 SLC40A1Q9NP59 571 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms