RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 E7EWF7 191 aa20.58■□□□□ 0.89
SHKBP1-227ENST00000602011 FIBPO43427 364 aa20.58■□□□□ 0.89
SHKBP1-227ENST00000602011 AMHP03971 560 aa20.58■□□□□ 0.89
SHKBP1-227ENST00000602011 HOXC8P31273 242 aa20.58■□□□□ 0.89
SHKBP1-227ENST00000602011 SP2Q02086 613 aa20.58■□□□□ 0.89
SHKBP1-227ENST00000602011 TRAF7Q6Q0C0 670 aa20.58■□□□□ 0.89
SHKBP1-227ENST00000602011 CUL5Q93034 780 aa20.58■□□□□ 0.89
SHKBP1-227ENST00000602011 ATP6V0A1Q93050 837 aa20.58■□□□□ 0.89
SHKBP1-227ENST00000602011 FRMPD4Q14CM0 1322 aa20.57■□□□□ 0.88
SHKBP1-227ENST00000602011 PIK3CDO00329 1044 aa20.57■□□□□ 0.88
SHKBP1-227ENST00000602011 CYTH3O43739 400 aa20.57■□□□□ 0.88
SHKBP1-227ENST00000602011 GSPT1P15170 499 aaKnown RBP20.57■□□□□ 0.88
SHKBP1-227ENST00000602011 THPOP40225 353 aa20.57■□□□□ 0.88
SHKBP1-227ENST00000602011 FAM117BQ6P1L5 589 aa20.57■□□□□ 0.88
SHKBP1-227ENST00000602011 CTCFLQ8NI51 663 aaPredicted RBP20.57■□□□□ 0.88
SHKBP1-227ENST00000602011 IGDCC4Q8TDY8 1250 aa20.57■□□□□ 0.88
SHKBP1-227ENST00000602011 MAP4K1Q92918 833 aa20.57■□□□□ 0.88
SHKBP1-227ENST00000602011 RRP36Q96EU6 259 aaKnown RBP20.57■□□□□ 0.88
SHKBP1-227ENST00000602011 SAMD11Q96NU1 681 aa20.57■□□□□ 0.88
SHKBP1-227ENST00000602011 LRFN3Q9BTN0 628 aa20.57■□□□□ 0.88
SHKBP1-227ENST00000602011 SPZ1Q9BXG8 430 aa20.57■□□□□ 0.88
SHKBP1-227ENST00000602011 IL25Q9H293 177 aa20.57■□□□□ 0.88
SHKBP1-227ENST00000602011 ZNF215Q9UL58 517 aaPredicted RBP20.57■□□□□ 0.88
SHKBP1-227ENST00000602011 SGSM2O43147 1006 aa20.56■□□□□ 0.88
SHKBP1-227ENST00000602011 SORBS3O60504 671 aa20.56■□□□□ 0.88
SHKBP1-227ENST00000602011 DDAH1O94760 285 aa20.56■□□□□ 0.88
SHKBP1-227ENST00000602011 PTH1RQ03431 593 aa20.56■□□□□ 0.88
SHKBP1-227ENST00000602011 NLRX1Q86UT6 975 aa20.56■□□□□ 0.88
SHKBP1-227ENST00000602011 SEPT8Q92599 483 aa20.56■□□□□ 0.88
SHKBP1-227ENST00000602011 WNT8BQ93098 351 aa20.56■□□□□ 0.88
SHKBP1-227ENST00000602011 CDHR1Q96JP9 859 aa20.56■□□□□ 0.88
SHKBP1-227ENST00000602011 MYH6P13533 1939 aa20.55■□□□□ 0.88
SHKBP1-227ENST00000602011 FAM86C2PA6NEL3 165 aa20.55■□□□□ 0.88
SHKBP1-227ENST00000602011 LGALS2P05162 132 aa20.55■□□□□ 0.88
SHKBP1-227ENST00000602011 PDE4AP27815 886 aa20.55■□□□□ 0.88
SHKBP1-227ENST00000602011 ZNF200P98182 395 aaPredicted RBP20.55■□□□□ 0.88
SHKBP1-227ENST00000602011 PLEKHG4Q58EX7 1191 aa20.55■□□□□ 0.88
SHKBP1-227ENST00000602011 TEX2Q8IWB9 1127 aa20.55■□□□□ 0.88
SHKBP1-227ENST00000602011 DBF4BQ8NFT6 615 aa20.55■□□□□ 0.88
SHKBP1-227ENST00000602011 IL31RAQ8NI17 732 aa20.55■□□□□ 0.88
SHKBP1-227ENST00000602011 SMARCC2Q8TAQ2 1214 aa20.55■□□□□ 0.88
SHKBP1-227ENST00000602011 APBB2Q92870 758 aa20.55■□□□□ 0.88
SHKBP1-227ENST00000602011 RNPEPQ9H4A4 650 aa20.55■□□□□ 0.88
SHKBP1-227ENST00000602011 SUGCTQ9HAC7 445 aa20.55■□□□□ 0.88
SHKBP1-227ENST00000602011 CD320Q9NPF0 282 aa20.55■□□□□ 0.88
SHKBP1-227ENST00000602011 SEC63Q9UGP8 760 aaKnown RBP20.55■□□□□ 0.88
SHKBP1-227ENST00000602011 LINC01553A4QN01 128 aa20.54■□□□□ 0.88
SHKBP1-227ENST00000602011 SMIM10L2AP0DMW4 78 aa20.54■□□□□ 0.88
SHKBP1-227ENST00000602011 SMIM10L2BP0DMW5 78 aa20.54■□□□□ 0.88
SHKBP1-227ENST00000602011 CALM1P0DP23 149 aa20.54■□□□□ 0.88
SHKBP1-227ENST00000602011 CALM2P0DP24 149 aa20.54■□□□□ 0.88
SHKBP1-227ENST00000602011 CALM3P0DP25 149 aa20.54■□□□□ 0.88
SHKBP1-227ENST00000602011 MRPS9P82933 396 aaKnown RBP20.54■□□□□ 0.88
SHKBP1-227ENST00000602011 HTRA4P83105 476 aaPredicted RBP20.54■□□□□ 0.88
SHKBP1-227ENST00000602011 MBTPS1Q14703 1052 aa20.54■□□□□ 0.88
SHKBP1-227ENST00000602011 SLC35G1Q2M3R5 365 aa20.54■□□□□ 0.88
SHKBP1-227ENST00000602011 PCNX4Q63HM2 1172 aa20.54■□□□□ 0.88
SHKBP1-227ENST00000602011 CASC1Q6TDU7 716 aa20.54■□□□□ 0.88
SHKBP1-227ENST00000602011 YTHDC1Q96MU7 727 aaKnown RBP20.54■□□□□ 0.88
SHKBP1-227ENST00000602011 MAFGO15525 162 aa20.53■□□□□ 0.88
SHKBP1-227ENST00000602011 RPLP2P05387 115 aaKnown RBP20.53■□□□□ 0.88
SHKBP1-227ENST00000602011 HIC1Q14526 733 aa20.53■□□□□ 0.88
SHKBP1-227ENST00000602011 CYFIP1Q7L576 1253 aa20.53■□□□□ 0.88
SHKBP1-227ENST00000602011 RPAINQ86UA6 219 aa20.53■□□□□ 0.88
SHKBP1-227ENST00000602011 TMEM87BQ96K49 555 aa20.53■□□□□ 0.88
SHKBP1-227ENST00000602011 GPR20Q99678 358 aa20.53■□□□□ 0.88
SHKBP1-227ENST00000602011 C11orf16Q9NQ32 467 aa20.53■□□□□ 0.88
SHKBP1-227ENST00000602011 NRCAMQ92823 1304 aa20.53■□□□□ 0.88
SHKBP1-227ENST00000602011 MCM5P33992 734 aa20.52■□□□□ 0.88
SHKBP1-227ENST00000602011 MKRN4PQ13434 485 aaPredicted RBP20.52■□□□□ 0.88
SHKBP1-227ENST00000602011 PTPROQ16827 1216 aa20.52■□□□□ 0.88
SHKBP1-227ENST00000602011 MB21D2Q8IYB1 491 aaPredicted RBP20.52■□□□□ 0.88
SHKBP1-227ENST00000602011 SP7Q8TDD2 431 aaPredicted RBP20.52■□□□□ 0.88
SHKBP1-227ENST00000602011 TOP1MTQ969P6 601 aa20.52■□□□□ 0.88
SHKBP1-227ENST00000602011 TREHO43280 583 aa20.51■□□□□ 0.87
SHKBP1-227ENST00000602011 LIFRP42702 1097 aa20.51■□□□□ 0.87
SHKBP1-227ENST00000602011 FAM26DQ5JW98 314 aa20.51■□□□□ 0.87
SHKBP1-227ENST00000602011 TAF2Q6P1X5 1199 aa20.51■□□□□ 0.87
SHKBP1-227ENST00000602011 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.51■□□□□ 0.87
SHKBP1-227ENST00000602011 FAM43BQ6ZT52 329 aaPredicted RBP20.51■□□□□ 0.87
SHKBP1-227ENST00000602011 ZNF654Q8IZM8 581 aa20.51■□□□□ 0.87
SHKBP1-227ENST00000602011 MYOCDQ8IZQ8 938 aa20.51■□□□□ 0.87
SHKBP1-227ENST00000602011 GPKOWQ92917 476 aaPredicted RBP eCLIP20.51■□□□□ 0.87
SHKBP1-227ENST00000602011 TNPO1Q92973 898 aaKnown RBP20.51■□□□□ 0.87
SHKBP1-227ENST00000602011 GPRASP2Q96D09 838 aa20.51■□□□□ 0.87
SHKBP1-227ENST00000602011 ZFP91Q96JP5 570 aaPredicted RBP20.51■□□□□ 0.87
SHKBP1-227ENST00000602011 SENP2Q9HC62 589 aa20.51■□□□□ 0.87
SHKBP1-227ENST00000602011 RTEL1Q9NZ71 1219 aa20.51■□□□□ 0.87
SHKBP1-227ENST00000602011 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.5■□□□□ 0.87
SHKBP1-227ENST00000602011 MEIS2O14770 477 aa20.5■□□□□ 0.87
SHKBP1-227ENST00000602011 PUS10Q3MIT2 529 aaKnown RBP20.5■□□□□ 0.87
SHKBP1-227ENST00000602011 TMEM31Q5JXX7 168 aa20.5■□□□□ 0.87
SHKBP1-227ENST00000602011 RSPH3Q86UC2 560 aa20.5■□□□□ 0.87
SHKBP1-227ENST00000602011 FBXO22Q8NEZ5 403 aa20.5■□□□□ 0.87
SHKBP1-227ENST00000602011 PSTPIP2Q9H939 334 aa20.5■□□□□ 0.87
SHKBP1-227ENST00000602011 LY9Q9HBG7 655 aa20.5■□□□□ 0.87
SHKBP1-227ENST00000602011 ARIH1Q9Y4X5 557 aaPredicted RBP20.5■□□□□ 0.87
SHKBP1-227ENST00000602011 MYH7BA7E2Y1 1941 aa20.49■□□□□ 0.87
SHKBP1-227ENST00000602011 CCDC69A6NI79 296 aa20.49■□□□□ 0.87
SHKBP1-227ENST00000602011 ANTXR2P58335 489 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms