RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 ZBBXA8MT70 800 aa26.01■■□□□ 1.75
SSBP4-209ENST00000601357 NOP56O00567 594 aaKnown RBP26.01■■□□□ 1.75
SSBP4-209ENST00000601357 ACTN1P12814 892 aa26.01■■□□□ 1.75
SSBP4-209ENST00000601357 FOSL2P15408 326 aa26.01■■□□□ 1.75
SSBP4-209ENST00000601357 ITGB5P18084 799 aa26.01■■□□□ 1.75
SSBP4-209ENST00000601357 CDC27P30260 824 aa26.01■■□□□ 1.75
SSBP4-209ENST00000601357 PPP1R18Q6NYC8 613 aa26.01■■□□□ 1.75
SSBP4-209ENST00000601357 TEX2Q8IWB9 1127 aa26.01■■□□□ 1.75
SSBP4-209ENST00000601357 MAFAQ8NHW3 353 aaPredicted RBP26.01■■□□□ 1.75
SSBP4-209ENST00000601357 WNT8BQ93098 351 aa26.01■■□□□ 1.75
SSBP4-209ENST00000601357 USP26Q9BXU7 913 aa26.01■■□□□ 1.75
SSBP4-209ENST00000601357 PCDHA6Q9UN73 950 aa26.01■■□□□ 1.75
SSBP4-209ENST00000601357 TELO2Q9Y4R8 837 aa26.01■■□□□ 1.75
SSBP4-209ENST00000601357 PCDHA8Q9Y5H6 950 aa26.01■■□□□ 1.75
SSBP4-209ENST00000601357 GOLGA8AA7E2F4 631 aa26■■□□□ 1.75
SSBP4-209ENST00000601357 GOLGA8BA8MQT2 603 aa26■■□□□ 1.75
SSBP4-209ENST00000601357 ATP2A2P16615 1042 aaKnown RBP26■■□□□ 1.75
SSBP4-209ENST00000601357 ZNF200P98182 395 aaPredicted RBP26■■□□□ 1.75
SSBP4-209ENST00000601357 TRAF7Q6Q0C0 670 aa26■■□□□ 1.75
SSBP4-209ENST00000601357 FBXL16Q8N461 479 aa26■■□□□ 1.75
SSBP4-209ENST00000601357 GIMAP8Q8ND71 665 aaPredicted RBP26■■□□□ 1.75
SSBP4-209ENST00000601357 JAKMIP1Q96N16 626 aaKnown RBP26■■□□□ 1.75
SSBP4-209ENST00000601357 PCDHA11Q9Y5I1 949 aa26■■□□□ 1.75
SSBP4-209ENST00000601357 UBIAD1Q9Y5Z9 338 aa26■■□□□ 1.75
SSBP4-209ENST00000601357 V9GY48 417 aaPredicted RBP26■■□□□ 1.75
SSBP4-209ENST00000601357 NID2Q14112 1375 aa25.99■■□□□ 1.75
SSBP4-209ENST00000601357 SPDYE3A6NKU9 549 aa25.99■■□□□ 1.75
SSBP4-209ENST00000601357 REC8O95072 547 aa25.99■■□□□ 1.75
SSBP4-209ENST00000601357 PARNO95453 639 aaKnown RBP25.99■■□□□ 1.75
SSBP4-209ENST00000601357 CXCL10P02778 98 aa25.99■■□□□ 1.75
SSBP4-209ENST00000601357 KCNA2P16389 499 aa25.99■■□□□ 1.75
SSBP4-209ENST00000601357 RABGGTBP53611 331 aa25.99■■□□□ 1.75
SSBP4-209ENST00000601357 SERINC5Q86VE9 423 aa25.99■■□□□ 1.75
SSBP4-209ENST00000601357 CDHR1Q96JP9 859 aa25.99■■□□□ 1.75
SSBP4-209ENST00000601357 FTOQ9C0B1 505 aaKnown RBP eCLIP25.99■■□□□ 1.75
SSBP4-209ENST00000601357 NKX2-4Q9H2Z4 354 aa25.99■■□□□ 1.75
SSBP4-209ENST00000601357 RIC8AQ9NPQ8 531 aa25.99■■□□□ 1.75
SSBP4-209ENST00000601357 PTPRSQ13332 1948 aa25.98■■□□□ 1.75
SSBP4-209ENST00000601357 hCG_1984214I3L0E3 225 aa25.98■■□□□ 1.75
SSBP4-209ENST00000601357 STXBP3O00186 592 aa25.98■■□□□ 1.75
SSBP4-209ENST00000601357 ATP9AO75110 1047 aa25.98■■□□□ 1.75
SSBP4-209ENST00000601357 Q6ZUG5 572 aa25.98■■□□□ 1.75
SSBP4-209ENST00000601357 ZNF713Q8N859 430 aaPredicted RBP25.98■■□□□ 1.75
SSBP4-209ENST00000601357 AGXT2Q9BYV1 514 aa25.98■■□□□ 1.75
SSBP4-209ENST00000601357 BARHL2Q9NY43 387 aa25.98■■□□□ 1.75
SSBP4-209ENST00000601357 NBNO60934 754 aa25.97■■□□□ 1.75
SSBP4-209ENST00000601357 BAIAP3O94812 1187 aa25.97■■□□□ 1.75
SSBP4-209ENST00000601357 SMIM10L2AP0DMW4 78 aa25.97■■□□□ 1.75
SSBP4-209ENST00000601357 SMIM10L2BP0DMW5 78 aa25.97■■□□□ 1.75
SSBP4-209ENST00000601357 NAPAP54920 295 aa25.97■■□□□ 1.75
SSBP4-209ENST00000601357 APOBRQ0VD83 1088 aa25.97■■□□□ 1.75
SSBP4-209ENST00000601357 BLOC1S2Q6QNY1 142 aa25.97■■□□□ 1.75
SSBP4-209ENST00000601357 PHOSPHO2Q8TCD6 241 aa25.97■■□□□ 1.75
SSBP4-209ENST00000601357 BRF1Q92994 677 aa25.97■■□□□ 1.75
SSBP4-209ENST00000601357 SLC9A7Q96T83 725 aa25.97■■□□□ 1.75
SSBP4-209ENST00000601357 SLC28A3Q9HAS3 691 aa25.97■■□□□ 1.75
SSBP4-209ENST00000601357 EPB41L2O43491 1005 aaKnown RBP25.96■■□□□ 1.75
SSBP4-209ENST00000601357 MYOGP15173 224 aa25.96■■□□□ 1.75
SSBP4-209ENST00000601357 RPS6KB1P23443 525 aa25.96■■□□□ 1.75
SSBP4-209ENST00000601357 ADD1P35611 737 aaKnown RBP25.96■■□□□ 1.75
SSBP4-209ENST00000601357 MTMR1Q13613 665 aa25.96■■□□□ 1.75
SSBP4-209ENST00000601357 ZNF618Q5T7W0 954 aa25.96■■□□□ 1.75
SSBP4-209ENST00000601357 TRIM50Q86XT4 487 aa25.96■■□□□ 1.75
SSBP4-209ENST00000601357 RNPEPQ9H4A4 650 aa25.96■■□□□ 1.75
SSBP4-209ENST00000601357 JADE2Q9NQC1 790 aa25.96■■□□□ 1.75
SSBP4-209ENST00000601357 C17orf102A2RUQ5 167 aa25.95■■□□□ 1.74
SSBP4-209ENST00000601357 MAFGO15525 162 aa25.95■■□□□ 1.74
SSBP4-209ENST00000601357 CLK2P49760 499 aaKnown RBP25.95■■□□□ 1.74
SSBP4-209ENST00000601357 METAP2P50579 478 aaKnown RBP eCLIP25.95■■□□□ 1.747e-7■■■□□ 17.5
SSBP4-209ENST00000601357 ADCY7P51828 1080 aa25.95■■□□□ 1.74
SSBP4-209ENST00000601357 FGD1P98174 961 aa25.95■■□□□ 1.74
SSBP4-209ENST00000601357 MBTPS1Q14703 1052 aa25.95■■□□□ 1.74
SSBP4-209ENST00000601357 PHF6Q8IWS0 365 aaKnown RBP eCLIP25.95■■□□□ 1.742e-6■■■■□ 19.6
SSBP4-209ENST00000601357 PRDM12Q9H4Q4 367 aa25.95■■□□□ 1.74
SSBP4-209ENST00000601357 EHMT1Q9H9B1 1298 aa25.95■■□□□ 1.74
SSBP4-209ENST00000601357 CCDC196A0A1B0GTZ2 297 aa25.94■■□□□ 1.74
SSBP4-209ENST00000601357 NEFLP07196 543 aa25.94■■□□□ 1.74
SSBP4-209ENST00000601357 CNKSR3Q6P9H4 555 aa25.94■■□□□ 1.74
SSBP4-209ENST00000601357 ATP6V0A1Q93050 837 aa25.94■■□□□ 1.74
SSBP4-209ENST00000601357 ZNF215Q9UL58 517 aaPredicted RBP25.94■■□□□ 1.74
SSBP4-209ENST00000601357 SMCO2A6NFE2 343 aa25.93■■□□□ 1.74
SSBP4-209ENST00000601357 TREHO43280 583 aa25.93■■□□□ 1.74
SSBP4-209ENST00000601357 FOSP01100 380 aaPredicted RBP25.93■■□□□ 1.74
SSBP4-209ENST00000601357 TCF7P36402 384 aaPredicted RBP25.93■■□□□ 1.74
SSBP4-209ENST00000601357 ADAM17P78536 824 aa25.93■■□□□ 1.74
SSBP4-209ENST00000601357 SP4Q02446 784 aa25.93■■□□□ 1.74
SSBP4-209ENST00000601357 PFKFB3Q16875 520 aaPredicted RBP25.93■■□□□ 1.74
SSBP4-209ENST00000601357 TCTN1Q2MV58 587 aa25.93■■□□□ 1.74
SSBP4-209ENST00000601357 HERC6Q8IVU3 1022 aa25.93■■□□□ 1.74
SSBP4-209ENST00000601357 NAP1L2Q9ULW6 460 aaPredicted RBP25.93■■□□□ 1.74
SSBP4-209ENST00000601357 GSTTP1A0A1W2PQM5 241 aa25.92■■□□□ 1.74
SSBP4-209ENST00000601357 EVCP57679 992 aa25.92■■□□□ 1.74
SSBP4-209ENST00000601357 WDR5P61964 334 aaKnown RBP25.92■■□□□ 1.74
SSBP4-209ENST00000601357 UTP14CQ5TAP6 766 aaKnown RBP25.92■■□□□ 1.74
SSBP4-209ENST00000601357 PPP2R2DQ66LE6 453 aa25.92■■□□□ 1.74
SSBP4-209ENST00000601357 PGBD1Q96JS3 809 aa25.92■■□□□ 1.74
SSBP4-209ENST00000601357 MXRA8Q9BRK3 442 aa25.92■■□□□ 1.74
SSBP4-209ENST00000601357 GLT8D2Q9H1C3 349 aa25.92■■□□□ 1.74
SSBP4-209ENST00000601357 VCANP13611 3396 aa25.92■■□□□ 1.74
SSBP4-209ENST00000601357 TRANK1O15050 2925 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms