RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 INF2Q27J81 1249 aa13.23□□□□□ -0.29
CHMP2A-207ENST00000600804 MYSM1Q5VVJ2 828 aa13.23□□□□□ -0.29
CHMP2A-207ENST00000600804 USP38Q8NB14 1042 aa13.23□□□□□ -0.29
CHMP2A-207ENST00000600804 INPP4AQ96PE3 977 aaPredicted RBP13.23□□□□□ -0.29
CHMP2A-207ENST00000600804 PURBQ96QR8 312 aaKnown RBP13.23□□□□□ -0.29
CHMP2A-207ENST00000600804 NOL7Q9UMY1 257 aaKnown RBP13.23□□□□□ -0.29
CHMP2A-207ENST00000600804 TCF20Q9UGU0 1960 aaKnown RBP13.22□□□□□ -0.29
CHMP2A-207ENST00000600804 MEIS1O00470 390 aa13.22□□□□□ -0.29
CHMP2A-207ENST00000600804 ADAMTS4O75173 837 aa13.22□□□□□ -0.29
CHMP2A-207ENST00000600804 BMP15O95972 392 aa13.22□□□□□ -0.29
CHMP2A-207ENST00000600804 PGK1P00558 417 aa13.22□□□□□ -0.29
CHMP2A-207ENST00000600804 ZNF865P0CJ78 1059 aaPredicted RBP13.22□□□□□ -0.29
CHMP2A-207ENST00000600804 EIF2AK2P19525 551 aaKnown RBP13.22□□□□□ -0.29
CHMP2A-207ENST00000600804 ICAM3P32942 547 aa13.22□□□□□ -0.29
CHMP2A-207ENST00000600804 TOB1P50616 345 aaPredicted RBP13.22□□□□□ -0.29
CHMP2A-207ENST00000600804 IRX5P78411 483 aaPredicted RBP13.22□□□□□ -0.29
CHMP2A-207ENST00000600804 MRPS9P82933 396 aaKnown RBP13.22□□□□□ -0.29
CHMP2A-207ENST00000600804 Q4G0T1 1027 aa13.22□□□□□ -0.29
CHMP2A-207ENST00000600804 CEP55Q53EZ4 464 aa13.22□□□□□ -0.29
CHMP2A-207ENST00000600804 ARMCX2Q7L311 632 aa13.22□□□□□ -0.29
CHMP2A-207ENST00000600804 FERMT3Q86UX7 667 aa13.22□□□□□ -0.29
CHMP2A-207ENST00000600804 IL31RAQ8NI17 732 aa13.22□□□□□ -0.29
CHMP2A-207ENST00000600804 GPRASP2Q96D09 838 aa13.22□□□□□ -0.29
CHMP2A-207ENST00000600804 PGBD1Q96JS3 809 aa13.22□□□□□ -0.29
CHMP2A-207ENST00000600804 KATNBL1Q9H079 304 aa13.22□□□□□ -0.29
CHMP2A-207ENST00000600804 VTA1Q9NP79 307 aa13.22□□□□□ -0.29
CHMP2A-207ENST00000600804 UBIAD1Q9Y5Z9 338 aa13.22□□□□□ -0.29
CHMP2A-207ENST00000600804 IGLV3-22A0A075B6J6 115 aa13.21□□□□□ -0.29
CHMP2A-207ENST00000600804 A0A1W2PQ45 241 aaPredicted RBP13.21□□□□□ -0.29
CHMP2A-207ENST00000600804 A0A1W2PQY0 241 aa13.21□□□□□ -0.29
CHMP2A-207ENST00000600804 RBM47A0AV96 593 aaKnown RBP13.21□□□□□ -0.29
CHMP2A-207ENST00000600804 FAM205CA6NFA0 338 aa13.21□□□□□ -0.29
CHMP2A-207ENST00000600804 KIAA0355O15063 1070 aa13.21□□□□□ -0.29
CHMP2A-207ENST00000600804 TGFB3P10600 412 aa13.21□□□□□ -0.29
CHMP2A-207ENST00000600804 SETQ01105 290 aaPredicted RBP13.21□□□□□ -0.29
CHMP2A-207ENST00000600804 PDE4DQ08499 809 aa13.21□□□□□ -0.29
CHMP2A-207ENST00000600804 KCNV1Q6PIU1 500 aa13.21□□□□□ -0.29
CHMP2A-207ENST00000600804 LENG9Q96B70 501 aa13.21□□□□□ -0.29
CHMP2A-207ENST00000600804 CDHR1Q96JP9 859 aa13.21□□□□□ -0.29
CHMP2A-207ENST00000600804 MXRA8Q9BRK3 442 aa13.21□□□□□ -0.29
CHMP2A-207ENST00000600804 ABHD16BQ9H3Z7 469 aa13.21□□□□□ -0.29
CHMP2A-207ENST00000600804 JADE2Q9NQC1 790 aa13.21□□□□□ -0.29
CHMP2A-207ENST00000600804 XPNPEP3Q9NQH7 507 aa13.21□□□□□ -0.29
CHMP2A-207ENST00000600804 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.21□□□□□ -0.29
CHMP2A-207ENST00000600804 SCN5AQ14524 2016 aa13.21□□□□□ -0.29
CHMP2A-207ENST00000600804 MYADML2A6NDP7 307 aa13.2□□□□□ -0.3
CHMP2A-207ENST00000600804 FAM86B1E9PN63 330 aa13.2□□□□□ -0.3
CHMP2A-207ENST00000600804 LAD1O00515 517 aa13.2□□□□□ -0.3
CHMP2A-207ENST00000600804 TBX3O15119 743 aa13.2□□□□□ -0.3
CHMP2A-207ENST00000600804 ADCY6O43306 1168 aa13.2□□□□□ -0.3
CHMP2A-207ENST00000600804 RGS20O76081 388 aa13.2□□□□□ -0.3
CHMP2A-207ENST00000600804 SNAI1O95863 264 aaPredicted RBP13.2□□□□□ -0.3
CHMP2A-207ENST00000600804 CLTBP09497 229 aa13.2□□□□□ -0.3
CHMP2A-207ENST00000600804 FAM86B2P0C5J1 330 aa13.2□□□□□ -0.3
CHMP2A-207ENST00000600804 FOSL2P15408 326 aa13.2□□□□□ -0.3
CHMP2A-207ENST00000600804 ITGB5P18084 799 aa13.2□□□□□ -0.3
CHMP2A-207ENST00000600804 GRIN2CQ14957 1233 aa13.2□□□□□ -0.3
CHMP2A-207ENST00000600804 LETM2Q2VYF4 491 aa13.2□□□□□ -0.3
CHMP2A-207ENST00000600804 GNPTABQ3T906 1256 aa13.2□□□□□ -0.3
CHMP2A-207ENST00000600804 TTC38Q5R3I4 469 aa13.2□□□□□ -0.3
CHMP2A-207ENST00000600804 NLRX1Q86UT6 975 aa13.2□□□□□ -0.3
CHMP2A-207ENST00000600804 ZNF396Q96N95 335 aaPredicted RBP13.2□□□□□ -0.3
CHMP2A-207ENST00000600804 SENP7Q9BQF6 1050 aa13.2□□□□□ -0.3
CHMP2A-207ENST00000600804 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.2□□□□□ -0.3
CHMP2A-207ENST00000600804 POLR3EQ9NVU0 708 aa13.2□□□□□ -0.3
CHMP2A-207ENST00000600804 PTPRSQ13332 1948 aa13.19□□□□□ -0.3
CHMP2A-207ENST00000600804 SYNRGQ9UMZ2 1314 aa13.19□□□□□ -0.3
CHMP2A-207ENST00000600804 PQBP1O60828 265 aaKnown RBP13.19□□□□□ -0.3
CHMP2A-207ENST00000600804 NASPP49321 788 aaPredicted RBP13.19□□□□□ -0.3
CHMP2A-207ENST00000600804 FAAP100Q0VG06 881 aa13.19□□□□□ -0.3
CHMP2A-207ENST00000600804 CCSAPQ6IQ19 270 aaPredicted RBP13.19□□□□□ -0.3
CHMP2A-207ENST00000600804 CLEC17AQ6ZS10 378 aa13.19□□□□□ -0.3
CHMP2A-207ENST00000600804 RNPC3Q96LT9 517 aaKnown RBP13.19□□□□□ -0.3
CHMP2A-207ENST00000600804 KCNMB3Q9NPA1 279 aa13.19□□□□□ -0.3
CHMP2A-207ENST00000600804 PRDM6Q9NQX0 595 aa13.19□□□□□ -0.3
CHMP2A-207ENST00000600804 SPATA31C2B4DYI2 1134 aa13.18□□□□□ -0.3
CHMP2A-207ENST00000600804 FIBPO43427 364 aa13.18□□□□□ -0.3
CHMP2A-207ENST00000600804 CCNT1O60563 726 aaKnown RBP13.18□□□□□ -0.3
CHMP2A-207ENST00000600804 TDP2O95551 362 aa13.18□□□□□ -0.3
CHMP2A-207ENST00000600804 RARBP10826 455 aa13.18□□□□□ -0.3
CHMP2A-207ENST00000600804 MYCLP12524 364 aaPredicted RBP13.18□□□□□ -0.3
CHMP2A-207ENST00000600804 ZNF76P36508 570 aa13.18□□□□□ -0.3
CHMP2A-207ENST00000600804 TAPT1Q6NXT6 567 aa13.18□□□□□ -0.3
CHMP2A-207ENST00000600804 C16orf59Q7L2K0 433 aa13.18□□□□□ -0.3
CHMP2A-207ENST00000600804 KLHDC9Q8NEP7 349 aa13.18□□□□□ -0.3
CHMP2A-207ENST00000600804 SCFD2Q8WU76 684 aa13.18□□□□□ -0.3
CHMP2A-207ENST00000600804 FAM20AQ96MK3 541 aa13.18□□□□□ -0.3
CHMP2A-207ENST00000600804 MTMR9Q96QG7 549 aa13.18□□□□□ -0.3
CHMP2A-207ENST00000600804 KCNH7Q9NS40 1196 aa13.18□□□□□ -0.3
CHMP2A-207ENST00000600804 RTEL1Q9NZ71 1219 aa13.18□□□□□ -0.3
CHMP2A-207ENST00000600804 DDX25Q9UHL0 483 aaKnown RBP13.18□□□□□ -0.3
CHMP2A-207ENST00000600804 CFAP45Q9UL16 551 aa13.18□□□□□ -0.3
CHMP2A-207ENST00000600804 CEP131Q9UPN4 1083 aa13.18□□□□□ -0.3
CHMP2A-207ENST00000600804 CNPY2Q9Y2B0 182 aa13.18□□□□□ -0.3
CHMP2A-207ENST00000600804 PCDHB6Q9Y5E3 794 aa13.18□□□□□ -0.3
CHMP2A-207ENST00000600804 WNT7AO00755 349 aa13.17□□□□□ -0.3
CHMP2A-207ENST00000600804 SLC37A4O43826 429 aa13.17□□□□□ -0.3
CHMP2A-207ENST00000600804 NEMFO60524 1076 aa13.17□□□□□ -0.3
CHMP2A-207ENST00000600804 YEATS4O95619 227 aa13.17□□□□□ -0.3
CHMP2A-207ENST00000600804 RAG1P15918 1043 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms