RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 MAFGO15525 162 aa18.5■□□□□ 0.55
LSM4-206ENST00000600289 NEDD9Q14511 834 aa18.5■□□□□ 0.55
LSM4-206ENST00000600289 REXO1Q8N1G1 1221 aaKnown RBP18.5■□□□□ 0.55
LSM4-206ENST00000600289 ATXN2LQ8WWM7 1075 aaKnown RBP18.5■□□□□ 0.55
LSM4-206ENST00000600289 CRYGNQ8WXF5 182 aa18.5■□□□□ 0.55
LSM4-206ENST00000600289 PRKAG2Q9UGJ0 569 aa18.5■□□□□ 0.55
LSM4-206ENST00000600289 PQBP1O60828 265 aaKnown RBP18.49■□□□□ 0.55
LSM4-206ENST00000600289 GGPS1O95749 300 aa18.49■□□□□ 0.55
LSM4-206ENST00000600289 CD4P01730 458 aa18.49■□□□□ 0.55
LSM4-206ENST00000600289 MYL3P08590 195 aa18.49■□□□□ 0.55
LSM4-206ENST00000600289 ITGB5P18084 799 aa18.49■□□□□ 0.55
LSM4-206ENST00000600289 PTPN11Q06124 597 aaPredicted RBP18.49■□□□□ 0.55
LSM4-206ENST00000600289 FAAP100Q0VG06 881 aa18.49■□□□□ 0.55
LSM4-206ENST00000600289 DGKDQ16760 1214 aa18.49■□□□□ 0.55
LSM4-206ENST00000600289 GIMAP8Q8ND71 665 aaPredicted RBP18.49■□□□□ 0.55
LSM4-206ENST00000600289 GTF3C6Q969F1 213 aa18.49■□□□□ 0.55
LSM4-206ENST00000600289 VTI1AQ96AJ9 217 aa18.49■□□□□ 0.55
LSM4-206ENST00000600289 ASB2Q96Q27 587 aa18.49■□□□□ 0.55
LSM4-206ENST00000600289 JADE2Q9NQC1 790 aa18.49■□□□□ 0.55
LSM4-206ENST00000600289 TBX21Q9UL17 535 aa18.49■□□□□ 0.55
LSM4-206ENST00000600289 ARIH1Q9Y4X5 557 aaPredicted RBP18.49■□□□□ 0.55
LSM4-206ENST00000600289 PIEZO1Q92508 2521 aa18.49■□□□□ 0.55
LSM4-206ENST00000600289 MYO9BQ13459 2157 aa18.48■□□□□ 0.55
LSM4-206ENST00000600289 TLR3O15455 904 aaKnown RBP18.48■□□□□ 0.55
LSM4-206ENST00000600289 ME3Q16798 604 aa18.48■□□□□ 0.55
LSM4-206ENST00000600289 NFRKBQ6P4R8 1299 aa18.48■□□□□ 0.55
LSM4-206ENST00000600289 METTL7BQ6UX53 244 aa18.48■□□□□ 0.55
LSM4-206ENST00000600289 BADQ92934 168 aa18.48■□□□□ 0.55
LSM4-206ENST00000600289 ZFP91Q96JP5 570 aaPredicted RBP18.48■□□□□ 0.55
LSM4-206ENST00000600289 UHRF1Q96T88 793 aaPredicted RBP18.48■□□□□ 0.55
LSM4-206ENST00000600289 TMEM260Q9NX78 707 aa18.48■□□□□ 0.55
LSM4-206ENST00000600289 RTEL1Q9NZ71 1219 aa18.48■□□□□ 0.55
LSM4-206ENST00000600289 VPS54Q9P1Q0 977 aa18.48■□□□□ 0.55
LSM4-206ENST00000600289 WDR81Q562E7 1941 aa18.47■□□□□ 0.55
LSM4-206ENST00000600289 TRIM43BA6NCK2 446 aa18.47■□□□□ 0.55
LSM4-206ENST00000600289 PPFIA3O75145 1194 aa18.47■□□□□ 0.55
LSM4-206ENST00000600289 PPFIA4O75335 1185 aa18.47■□□□□ 0.55
LSM4-206ENST00000600289 LARGE1O95461 756 aa18.47■□□□□ 0.55
LSM4-206ENST00000600289 CTDNEP1O95476 244 aa18.47■□□□□ 0.55
LSM4-206ENST00000600289 F2P00734 622 aa18.47■□□□□ 0.55
LSM4-206ENST00000600289 CYP3A4P08684 503 aa18.47■□□□□ 0.55
LSM4-206ENST00000600289 KCNA2P16389 499 aa18.47■□□□□ 0.55
LSM4-206ENST00000600289 PSMC6P62333 389 aa18.47■□□□□ 0.55
LSM4-206ENST00000600289 MTMR1Q13613 665 aa18.47■□□□□ 0.55
LSM4-206ENST00000600289 HSDL1Q3SXM5 330 aa18.47■□□□□ 0.55
LSM4-206ENST00000600289 GALNT17Q6IS24 598 aa18.47■□□□□ 0.55
LSM4-206ENST00000600289 NIPA1Q7RTP0 329 aa18.47■□□□□ 0.55
LSM4-206ENST00000600289 SESTD1Q86VW0 696 aa18.47■□□□□ 0.55
LSM4-206ENST00000600289 DAGLBQ8NCG7 672 aa18.47■□□□□ 0.55
LSM4-206ENST00000600289 TRIM43Q96BQ3 446 aaPredicted RBP18.47■□□□□ 0.55
LSM4-206ENST00000600289 SPATA33Q96N06 139 aa18.47■□□□□ 0.55
LSM4-206ENST00000600289 MXRA8Q9BRK3 442 aa18.47■□□□□ 0.55
LSM4-206ENST00000600289 ARHGAP4P98171 946 aa18.46■□□□□ 0.55
LSM4-206ENST00000600289 CEP55Q53EZ4 464 aa18.46■□□□□ 0.55
LSM4-206ENST00000600289 SH3RF1Q7Z6J0 888 aa18.46■□□□□ 0.55
LSM4-206ENST00000600289 KAT2BQ92831 832 aa18.46■□□□□ 0.55
LSM4-206ENST00000600289 PGBD1Q96JS3 809 aa18.46■□□□□ 0.55
LSM4-206ENST00000600289 KATNAL1Q9BW62 490 aa18.46■□□□□ 0.55
LSM4-206ENST00000600289 MLXIPQ9HAP2 919 aa18.46■□□□□ 0.55
LSM4-206ENST00000600289 UPF2Q9HAU5 1272 aaKnown RBP18.46■□□□□ 0.55
LSM4-206ENST00000600289 PRDM5Q9NQX1 630 aaPredicted RBP18.46■□□□□ 0.55
LSM4-206ENST00000600289 THEGQ9P2T0 379 aa18.46■□□□□ 0.55
LSM4-206ENST00000600289 CHD7Q9P2D1 2997 aa18.45■□□□□ 0.54
LSM4-206ENST00000600289 M0R2N6 131 aa18.45■□□□□ 0.54
LSM4-206ENST00000600289 HAS3O00219 553 aa18.45■□□□□ 0.54
LSM4-206ENST00000600289 ADAMTS3O15072 1205 aa18.45■□□□□ 0.54
LSM4-206ENST00000600289 NBPF20Q3BBV1 942 aa18.45■□□□□ 0.54
LSM4-206ENST00000600289 JAKMIP3Q5VZ66 844 aa18.45■□□□□ 0.54
LSM4-206ENST00000600289 TMEM39AQ9NV64 488 aa18.45■□□□□ 0.54
LSM4-206ENST00000600289 PCDHA4Q9UN74 947 aa18.45■□□□□ 0.54
LSM4-206ENST00000600289 LIMCH1Q9UPQ0 1083 aa18.45■□□□□ 0.54
LSM4-206ENST00000600289 NFASCO94856 1347 aa18.45■□□□□ 0.54
LSM4-206ENST00000600289 GBF1Q92538 1859 aa18.44■□□□□ 0.54
LSM4-206ENST00000600289 MEIS1O00470 390 aa18.44■□□□□ 0.54
LSM4-206ENST00000600289 NLRP5P59047 1200 aa18.44■□□□□ 0.54
LSM4-206ENST00000600289 RABEP1Q15276 862 aa18.44■□□□□ 0.54
LSM4-206ENST00000600289 NPY5RQ15761 445 aa18.44■□□□□ 0.54
LSM4-206ENST00000600289 CYFIP1Q7L576 1253 aa18.44■□□□□ 0.54
LSM4-206ENST00000600289 NECAB1Q8N987 351 aa18.44■□□□□ 0.54
LSM4-206ENST00000600289 NSUN7Q8NE18 718 aaKnown RBP18.44■□□□□ 0.54
LSM4-206ENST00000600289 WASF1Q92558 559 aa18.44■□□□□ 0.54
LSM4-206ENST00000600289 GPR20Q99678 358 aa18.44■□□□□ 0.54
LSM4-206ENST00000600289 BCAS3Q9H6U6 928 aa18.44■□□□□ 0.54
LSM4-206ENST00000600289 KCNH7Q9NS40 1196 aa18.44■□□□□ 0.54
LSM4-206ENST00000600289 IGLV3-22A0A075B6J6 115 aa18.43■□□□□ 0.54
LSM4-206ENST00000600289 B4GALT4O60513 344 aa18.43■□□□□ 0.54
LSM4-206ENST00000600289 ATP9AO75110 1047 aa18.43■□□□□ 0.54
LSM4-206ENST00000600289 TIMP1P01033 207 aa18.43■□□□□ 0.54
LSM4-206ENST00000600289 SUPT20HL2P0C7V6 817 aa18.43■□□□□ 0.54
LSM4-206ENST00000600289 XBP1P17861 261 aa18.43■□□□□ 0.54
LSM4-206ENST00000600289 DNAJB2P25686 324 aa18.43■□□□□ 0.54
LSM4-206ENST00000600289 CIITAP33076 1130 aa18.43■□□□□ 0.54
LSM4-206ENST00000600289 AIFM3Q96NN9 605 aa18.43■□□□□ 0.54
LSM4-206ENST00000600289 C16orf70Q9BSU1 422 aa18.43■□□□□ 0.54
LSM4-206ENST00000600289 PHF20Q9BVI0 1012 aa18.43■□□□□ 0.54
LSM4-206ENST00000600289 C1QTNF1Q9BXJ1 281 aa18.43■□□□□ 0.54
LSM4-206ENST00000600289 GTF3C3Q9Y5Q9 886 aa18.43■□□□□ 0.54
LSM4-206ENST00000600289 TRIP12Q14669 1992 aaPredicted RBP18.42■□□□□ 0.54
LSM4-206ENST00000600289 NOP56O00567 594 aaKnown RBP18.42■□□□□ 0.54
LSM4-206ENST00000600289 ZNF286BP0CG31 522 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms