RNA–Protein interactions for RNA: ENST00000600236.1

HIF3A-217, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 313 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-217ENST00000600236 MEIS2O14770 477 aa13.14□□□□□ -0.31
HIF3A-217ENST00000600236 LGR5O75473 907 aa13.14□□□□□ -0.31
HIF3A-217ENST00000600236 SMIM10L2AP0DMW4 78 aa13.14□□□□□ -0.31
HIF3A-217ENST00000600236 SMIM10L2BP0DMW5 78 aa13.14□□□□□ -0.31
HIF3A-217ENST00000600236 RXRAP19793 462 aa13.14□□□□□ -0.31
HIF3A-217ENST00000600236 ZNF200P98182 395 aaPredicted RBP13.14□□□□□ -0.31
HIF3A-217ENST00000600236 TAP1Q03518 808 aa13.14□□□□□ -0.31
HIF3A-217ENST00000600236 SKIV2LQ15477 1246 aaKnown RBP13.14□□□□□ -0.31
HIF3A-217ENST00000600236 AAK1Q2M2I8 961 aa13.14□□□□□ -0.31
HIF3A-217ENST00000600236 TRIM71Q2Q1W2 868 aaKnown RBP13.14□□□□□ -0.31
HIF3A-217ENST00000600236 SGMS1Q86VZ5 419 aa13.14□□□□□ -0.31
HIF3A-217ENST00000600236 MICU3Q86XE3 530 aa13.14□□□□□ -0.31
HIF3A-217ENST00000600236 SRBD1Q8N5C6 995 aaKnown RBP13.14□□□□□ -0.31
HIF3A-217ENST00000600236 FANCBQ8NB91 859 aa13.14□□□□□ -0.31
HIF3A-217ENST00000600236 ARNTL2Q8WYA1 636 aa13.14□□□□□ -0.31
HIF3A-217ENST00000600236 GPRASP2Q96D09 838 aa13.14□□□□□ -0.31
HIF3A-217ENST00000600236 NEK1Q96PY6 1258 aa13.14□□□□□ -0.31
HIF3A-217ENST00000600236 ASB2Q96Q27 587 aa13.14□□□□□ -0.31
HIF3A-217ENST00000600236 GPR20Q99678 358 aa13.14□□□□□ -0.31
HIF3A-217ENST00000600236 CERS4Q9HA82 394 aa13.14□□□□□ -0.31
HIF3A-217ENST00000600236 PRDM6Q9NQX0 595 aa13.14□□□□□ -0.31
HIF3A-217ENST00000600236 RBM28Q9NW13 759 aaKnown RBP13.14□□□□□ -0.31
HIF3A-217ENST00000600236 DNAH12Q6ZR08 3092 aa13.14□□□□□ -0.31
HIF3A-217ENST00000600236 GJB5O95377 273 aa13.13□□□□□ -0.31
HIF3A-217ENST00000600236 AMHP03971 560 aa13.13□□□□□ -0.31
HIF3A-217ENST00000600236 POU3F3P20264 500 aaPredicted RBP13.13□□□□□ -0.31
HIF3A-217ENST00000600236 SP4Q02446 784 aa13.13□□□□□ -0.31
HIF3A-217ENST00000600236 GPNMBQ14956 572 aa13.13□□□□□ -0.31
HIF3A-217ENST00000600236 UTP14CQ5TAP6 766 aaKnown RBP13.13□□□□□ -0.31
HIF3A-217ENST00000600236 TMTC3Q6ZXV5 915 aa13.13□□□□□ -0.31
HIF3A-217ENST00000600236 HEATR3Q7Z4Q2 680 aa13.13□□□□□ -0.31
HIF3A-217ENST00000600236 TEX2Q8IWB9 1127 aa13.13□□□□□ -0.31
HIF3A-217ENST00000600236 CMTR1Q8N1G2 835 aaKnown RBP13.13□□□□□ -0.31
HIF3A-217ENST00000600236 CCDC136Q96JN2 1154 aa13.13□□□□□ -0.31
HIF3A-217ENST00000600236 RNPEPQ9H4A4 650 aa13.13□□□□□ -0.31
HIF3A-217ENST00000600236 MYH6P13533 1939 aa13.13□□□□□ -0.31
HIF3A-217ENST00000600236 KIAA1217Q5T5P2 1943 aa13.13□□□□□ -0.31
HIF3A-217ENST00000600236 MAFGO15525 162 aa13.12□□□□□ -0.31
HIF3A-217ENST00000600236 HOXC8P31273 242 aa13.12□□□□□ -0.31
HIF3A-217ENST00000600236 DEFB103AP81534 67 aa13.12□□□□□ -0.31
HIF3A-217ENST00000600236 SEMA3FQ13275 785 aa13.12□□□□□ -0.31
HIF3A-217ENST00000600236 MTMR1Q13613 665 aa13.12□□□□□ -0.31
HIF3A-217ENST00000600236 KRT32Q14532 448 aa13.12□□□□□ -0.31
HIF3A-217ENST00000600236 TRAF7Q6Q0C0 670 aa13.12□□□□□ -0.31
HIF3A-217ENST00000600236 CCDC82Q8N4S0 544 aa13.12□□□□□ -0.31
HIF3A-217ENST00000600236 SEPT8Q92599 483 aa13.12□□□□□ -0.31
HIF3A-217ENST00000600236 WNT8BQ93098 351 aa13.12□□□□□ -0.31
HIF3A-217ENST00000600236 RAD9AQ99638 391 aa13.12□□□□□ -0.31
HIF3A-217ENST00000600236 LRRC2Q9BYS8 371 aa13.12□□□□□ -0.31
HIF3A-217ENST00000600236 MTCH2Q9Y6C9 303 aa13.12□□□□□ -0.31
HIF3A-217ENST00000600236 COL6A3P12111 3177 aa13.12□□□□□ -0.31
HIF3A-217ENST00000600236 NRCAMQ92823 1304 aa13.12□□□□□ -0.31
HIF3A-217ENST00000600236 hCG_1984214I3L0E3 225 aa13.11□□□□□ -0.31
HIF3A-217ENST00000600236 TNFRSF10AO00220 468 aa13.11□□□□□ -0.31
HIF3A-217ENST00000600236 RFXAPO00287 272 aa13.11□□□□□ -0.31
HIF3A-217ENST00000600236 TREHO43280 583 aa13.11□□□□□ -0.31
HIF3A-217ENST00000600236 CDC45O75419 566 aa13.11□□□□□ -0.31
HIF3A-217ENST00000600236 HMGB1P09429 215 aaKnown RBP13.11□□□□□ -0.31
HIF3A-217ENST00000600236 ARHGAP4P98171 946 aa13.11□□□□□ -0.31
HIF3A-217ENST00000600236 HIC1Q14526 733 aa13.11□□□□□ -0.31
HIF3A-217ENST00000600236 PPP1R18Q6NYC8 613 aa13.11□□□□□ -0.31
HIF3A-217ENST00000600236 RSPH3Q86UC2 560 aa13.11□□□□□ -0.31
HIF3A-217ENST00000600236 RAB11FIP4Q86YS3 637 aa13.11□□□□□ -0.31
HIF3A-217ENST00000600236 ZNF713Q8N859 430 aaPredicted RBP13.11□□□□□ -0.31
HIF3A-217ENST00000600236 DBF4BQ8NFT6 615 aa13.11□□□□□ -0.31
HIF3A-217ENST00000600236 SEPT1Q8WYJ6 367 aa13.11□□□□□ -0.31
HIF3A-217ENST00000600236 APBB2Q92870 758 aa13.11□□□□□ -0.31
HIF3A-217ENST00000600236 TNPO1Q92973 898 aaKnown RBP13.11□□□□□ -0.31
HIF3A-217ENST00000600236 TGS1Q96RS0 853 aaKnown RBP13.11□□□□□ -0.31
HIF3A-217ENST00000600236 SETD4Q9NVD3 440 aa13.11□□□□□ -0.31
HIF3A-217ENST00000600236 PCDHA6Q9UN73 950 aa13.11□□□□□ -0.31
HIF3A-217ENST00000600236 COG5Q9UP83 839 aa13.11□□□□□ -0.31
HIF3A-217ENST00000600236 INSL6Q9Y581 213 aa13.11□□□□□ -0.31
HIF3A-217ENST00000600236 PCDHA8Q9Y5H6 950 aa13.11□□□□□ -0.31
HIF3A-217ENST00000600236 ZBTB43O43298 467 aa13.1□□□□□ -0.31
HIF3A-217ENST00000600236 CTSHP09668 335 aa13.1□□□□□ -0.31
HIF3A-217ENST00000600236 TCF7P36402 384 aaPredicted RBP13.1□□□□□ -0.31
HIF3A-217ENST00000600236 NAPAP54920 295 aa13.1□□□□□ -0.31
HIF3A-217ENST00000600236 FGD1P98174 961 aa13.1□□□□□ -0.31
HIF3A-217ENST00000600236 GRB10Q13322 594 aa13.1□□□□□ -0.31
HIF3A-217ENST00000600236 MBTPS1Q14703 1052 aa13.1□□□□□ -0.31
HIF3A-217ENST00000600236 UBE2SQ16763 222 aa13.1□□□□□ -0.31
HIF3A-217ENST00000600236 RTN1Q16799 776 aa13.1□□□□□ -0.31
HIF3A-217ENST00000600236 PLEKHG4Q58EX7 1191 aa13.1□□□□□ -0.31
HIF3A-217ENST00000600236 FAM117BQ6P1L5 589 aa13.1□□□□□ -0.31
HIF3A-217ENST00000600236 TAF2Q6P1X5 1199 aa13.1□□□□□ -0.31
HIF3A-217ENST00000600236 APOA5Q6Q788 366 aa13.1□□□□□ -0.31
HIF3A-217ENST00000600236 DHX32Q7L7V1 743 aaKnown RBP13.1□□□□□ -0.31
HIF3A-217ENST00000600236 TRIM50Q86XT4 487 aa13.1□□□□□ -0.31
HIF3A-217ENST00000600236 MYOCDQ8IZQ8 938 aa13.1□□□□□ -0.31
HIF3A-217ENST00000600236 ADAMTS19Q8TE59 1207 aa13.1□□□□□ -0.31
HIF3A-217ENST00000600236 GLG1Q92896 1179 aa13.1□□□□□ -0.31
HIF3A-217ENST00000600236 GLT8D2Q9H1C3 349 aa13.1□□□□□ -0.31
HIF3A-217ENST00000600236 BCAS3Q9H6U6 928 aa13.1□□□□□ -0.31
HIF3A-217ENST00000600236 JADE2Q9NQC1 790 aa13.1□□□□□ -0.31
HIF3A-217ENST00000600236 ERAP1Q9NZ08 941 aa13.1□□□□□ -0.31
HIF3A-217ENST00000600236 LMCD1Q9NZU5 365 aa13.1□□□□□ -0.31
HIF3A-217ENST00000600236 UBIAD1Q9Y5Z9 338 aa13.1□□□□□ -0.31
HIF3A-217ENST00000600236 hCG_1642624A0A1W2PR95 340 aa13.09□□□□□ -0.31
HIF3A-217ENST00000600236 LCHNA4D1U4 455 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms