RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 PRDM6Q9NQX0 595 aa21.56■■□□□ 1.04
PNKP-213ENST00000599543 C17orf102A2RUQ5 167 aa21.55■■□□□ 1.04
PNKP-213ENST00000599543 SPATA31C2B4DYI2 1134 aa21.55■■□□□ 1.04
PNKP-213ENST00000599543 MEIS2O14770 477 aa21.55■■□□□ 1.04
PNKP-213ENST00000599543 NBNO60934 754 aa21.55■■□□□ 1.04
PNKP-213ENST00000599543 GPNMBQ14956 572 aa21.55■■□□□ 1.04
PNKP-213ENST00000599543 ZNF618Q5T7W0 954 aa21.55■■□□□ 1.04
PNKP-213ENST00000599543 RNF20Q5VTR2 975 aa21.55■■□□□ 1.04
PNKP-213ENST00000599543 XRRA1Q6P2D8 792 aa21.55■■□□□ 1.04
PNKP-213ENST00000599543 CYFIP1Q7L576 1253 aa21.55■■□□□ 1.04
PNKP-213ENST00000599543 WNT8BQ93098 351 aa21.55■■□□□ 1.04
PNKP-213ENST00000599543 USP26Q9BXU7 913 aa21.55■■□□□ 1.04
PNKP-213ENST00000599543 LRRC2Q9BYS8 371 aa21.55■■□□□ 1.04
PNKP-213ENST00000599543 THEGQ9P2T0 379 aa21.55■■□□□ 1.04
PNKP-213ENST00000599543 TLL1O43897 1013 aa21.54■■□□□ 1.04
PNKP-213ENST00000599543 SEMA3FQ13275 785 aa21.54■■□□□ 1.04
PNKP-213ENST00000599543 COL9A3Q14050 684 aaPredicted RBP21.54■■□□□ 1.04
PNKP-213ENST00000599543 TRIM71Q2Q1W2 868 aaKnown RBP21.54■■□□□ 1.04
PNKP-213ENST00000599543 SERINC5Q86VE9 423 aa21.54■■□□□ 1.04
PNKP-213ENST00000599543 MICU3Q86XE3 530 aa21.54■■□□□ 1.04
PNKP-213ENST00000599543 RAB11FIP4Q86YS3 637 aa21.54■■□□□ 1.04
PNKP-213ENST00000599543 MICALL1Q8N3F8 863 aa21.54■■□□□ 1.04
PNKP-213ENST00000599543 ATP6V0A1Q93050 837 aa21.54■■□□□ 1.04
PNKP-213ENST00000599543 BCAS3Q9H6U6 928 aa21.54■■□□□ 1.04
PNKP-213ENST00000599543 PSTPIP2Q9H939 334 aa21.54■■□□□ 1.04
PNKP-213ENST00000599543 CERS4Q9HA82 394 aa21.54■■□□□ 1.04
PNKP-213ENST00000599543 MICAL3Q7RTP6 2002 aa21.54■■□□□ 1.04
PNKP-213ENST00000599543 NCOR1O75376 2440 aa21.54■■□□□ 1.04
PNKP-213ENST00000599543 EMSYQ7Z589 1322 aa21.54■■□□□ 1.04
PNKP-213ENST00000599543 ABHD14A-ACY1A0A1B0GW23 586 aa21.53■■□□□ 1.04
PNKP-213ENST00000599543 EFCAB14O75071 495 aa21.53■■□□□ 1.04
PNKP-213ENST00000599543 SMIM10L2AP0DMW4 78 aa21.53■■□□□ 1.04
PNKP-213ENST00000599543 SMIM10L2BP0DMW5 78 aa21.53■■□□□ 1.04
PNKP-213ENST00000599543 THPOP40225 353 aa21.53■■□□□ 1.04
PNKP-213ENST00000599543 HIC1Q14526 733 aa21.53■■□□□ 1.04
PNKP-213ENST00000599543 NLRX1Q86UT6 975 aa21.53■■□□□ 1.04
PNKP-213ENST00000599543 ATXN2LQ8WWM7 1075 aaKnown RBP21.53■■□□□ 1.04
PNKP-213ENST00000599543 ZBED2Q9BTP6 218 aa21.53■■□□□ 1.04
PNKP-213ENST00000599543 ZNF215Q9UL58 517 aaPredicted RBP21.53■■□□□ 1.04
PNKP-213ENST00000599543 COL4A4P53420 1690 aaPredicted RBP21.53■■□□□ 1.04
PNKP-213ENST00000599543 GTPBP6O43824 516 aaPredicted RBP21.52■■□□□ 1.04
PNKP-213ENST00000599543 DEFB103AP81534 67 aa21.52■■□□□ 1.04
PNKP-213ENST00000599543 SP4Q02446 784 aa21.52■■□□□ 1.04
PNKP-213ENST00000599543 TAP1Q03518 808 aa21.52■■□□□ 1.04
PNKP-213ENST00000599543 IKBKEQ14164 716 aa21.52■■□□□ 1.04
PNKP-213ENST00000599543 TRAF7Q6Q0C0 670 aa21.52■■□□□ 1.04
PNKP-213ENST00000599543 SYNE3Q6ZMZ3 975 aa21.52■■□□□ 1.04
PNKP-213ENST00000599543 TMTC3Q6ZXV5 915 aa21.52■■□□□ 1.04
PNKP-213ENST00000599543 SGMS1Q86VZ5 419 aa21.52■■□□□ 1.04
PNKP-213ENST00000599543 CCDC82Q8N4S0 544 aa21.52■■□□□ 1.04
PNKP-213ENST00000599543 FANCBQ8NB91 859 aa21.52■■□□□ 1.04
PNKP-213ENST00000599543 GIMAP8Q8ND71 665 aaPredicted RBP21.52■■□□□ 1.04
PNKP-213ENST00000599543 ARNTL2Q8WYA1 636 aa21.52■■□□□ 1.04
PNKP-213ENST00000599543 GPR20Q99678 358 aa21.52■■□□□ 1.04
PNKP-213ENST00000599543 SENP7Q9BQF6 1050 aa21.52■■□□□ 1.04
PNKP-213ENST00000599543 TSPYL2Q9H2G4 693 aaPredicted RBP21.52■■□□□ 1.04
PNKP-213ENST00000599543 hCG_1642624A0A1W2PR95 340 aa21.51■■□□□ 1.03
PNKP-213ENST00000599543 RSPH10B2B2RC85 870 aa21.51■■□□□ 1.03
PNKP-213ENST00000599543 RSPH10BP0C881 870 aa21.51■■□□□ 1.03
PNKP-213ENST00000599543 HOXC8P31273 242 aa21.51■■□□□ 1.03
PNKP-213ENST00000599543 MBTPS1Q14703 1052 aa21.51■■□□□ 1.03
PNKP-213ENST00000599543 HEATR3Q7Z4Q2 680 aa21.51■■□□□ 1.03
PNKP-213ENST00000599543 TMCO2Q7Z6W1 182 aaPredicted RBP21.51■■□□□ 1.03
PNKP-213ENST00000599543 CDHR1Q96JP9 859 aa21.51■■□□□ 1.03
PNKP-213ENST00000599543 GTF3C3Q9Y5Q9 886 aa21.51■■□□□ 1.03
PNKP-213ENST00000599543 SPDYE3A6NKU9 549 aa21.5■■□□□ 1.03
PNKP-213ENST00000599543 RFXAPO00287 272 aa21.5■■□□□ 1.03
PNKP-213ENST00000599543 LGR5O75473 907 aa21.5■■□□□ 1.03
PNKP-213ENST00000599543 ARHGEF15O94989 841 aa21.5■■□□□ 1.03
PNKP-213ENST00000599543 GNAT1P11488 350 aa21.5■■□□□ 1.03
PNKP-213ENST00000599543 UTP14CQ5TAP6 766 aaKnown RBP21.5■■□□□ 1.03
PNKP-213ENST00000599543 TRIM50Q86XT4 487 aa21.5■■□□□ 1.03
PNKP-213ENST00000599543 GPRASP2Q96D09 838 aa21.5■■□□□ 1.03
PNKP-213ENST00000599543 NEK1Q96PY6 1258 aa21.5■■□□□ 1.03
PNKP-213ENST00000599543 RNPEPQ9H4A4 650 aa21.5■■□□□ 1.03
PNKP-213ENST00000599543 EPOPA6NHQ4 379 aa21.49■■□□□ 1.03
PNKP-213ENST00000599543 TREHO43280 583 aa21.49■■□□□ 1.03
PNKP-213ENST00000599543 GJB5O95377 273 aa21.49■■□□□ 1.03
PNKP-213ENST00000599543 MRPS5P82675 430 aaKnown RBP21.49■■□□□ 1.03
PNKP-213ENST00000599543 UBE2SQ16763 222 aa21.49■■□□□ 1.03
PNKP-213ENST00000599543 TCTN1Q2MV58 587 aa21.49■■□□□ 1.03
PNKP-213ENST00000599543 ASB2Q96Q27 587 aa21.49■■□□□ 1.03
PNKP-213ENST00000599543 RBM28Q9NW13 759 aaKnown RBP21.49■■□□□ 1.03
PNKP-213ENST00000599543 SIP14410 1827 aa21.49■■□□□ 1.03
PNKP-213ENST00000599543 LCHNA4D1U4 455 aa21.48■■□□□ 1.03
PNKP-213ENST00000599543 CAND2O75155 1236 aa21.48■■□□□ 1.03
PNKP-213ENST00000599543 SKIV2LQ15477 1246 aaKnown RBP21.48■■□□□ 1.03
PNKP-213ENST00000599543 APOA5Q6Q788 366 aa21.48■■□□□ 1.03
PNKP-213ENST00000599543 IL27Q8NEV9 243 aa21.48■■□□□ 1.03
PNKP-213ENST00000599543 EHMT1Q9H9B1 1298 aa21.48■■□□□ 1.03
PNKP-213ENST00000599543 SETD4Q9NVD3 440 aa21.48■■□□□ 1.03
PNKP-213ENST00000599543 MTCH2Q9Y6C9 303 aa21.48■■□□□ 1.03
PNKP-213ENST00000599543 CTSHP09668 335 aa21.47■■□□□ 1.03
PNKP-213ENST00000599543 POU3F3P20264 500 aaPredicted RBP21.47■■□□□ 1.03
PNKP-213ENST00000599543 ARHGAP4P98171 946 aa21.47■■□□□ 1.03
PNKP-213ENST00000599543 MTMR1Q13613 665 aa21.47■■□□□ 1.03
PNKP-213ENST00000599543 RAD9AQ99638 391 aa21.47■■□□□ 1.03
PNKP-213ENST00000599543 TELO2Q9Y4R8 837 aa21.47■■□□□ 1.03
PNKP-213ENST00000599543 CNTNAP5Q8WYK1 1306 aa21.47■■□□□ 1.03
PNKP-213ENST00000599543 AMHP03971 560 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms