RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 GTF2IRD1Q9UHL9 959 aa25.85■■□□□ 1.73
CCDC9-204ENST00000599398 UBIAD1Q9Y5Z9 338 aa25.85■■□□□ 1.73
CCDC9-204ENST00000599398 TRIP12Q14669 1992 aaPredicted RBP25.85■■□□□ 1.73
CCDC9-204ENST00000599398 HAS3O00219 553 aa25.84■■□□□ 1.73
CCDC9-204ENST00000599398 LGALS2P05162 132 aa25.84■■□□□ 1.73
CCDC9-204ENST00000599398 IFNAR1P17181 557 aa25.84■■□□□ 1.73
CCDC9-204ENST00000599398 STK3Q13188 491 aa25.84■■□□□ 1.73
CCDC9-204ENST00000599398 AP3B2Q13367 1082 aa25.84■■□□□ 1.73
CCDC9-204ENST00000599398 BFSP2Q13515 415 aa25.84■■□□□ 1.73
CCDC9-204ENST00000599398 RETREG2Q8NC44 543 aa25.84■■□□□ 1.73
CCDC9-204ENST00000599398 ZNF274Q96GC6 653 aaPredicted RBP25.84■■□□□ 1.73
CCDC9-204ENST00000599398 GPR20Q99678 358 aa25.84■■□□□ 1.73
CCDC9-204ENST00000599398 C6orf50Q9HD87 102 aa25.84■■□□□ 1.73
CCDC9-204ENST00000599398 CPLX1O14810 134 aa25.83■■□□□ 1.73
CCDC9-204ENST00000599398 EIF5BO60841 1220 aaKnown RBP25.83■■□□□ 1.73
CCDC9-204ENST00000599398 ATP9AO75110 1047 aa25.83■■□□□ 1.73
CCDC9-204ENST00000599398 JAKMIP3Q5VZ66 844 aa25.83■■□□□ 1.73
CCDC9-204ENST00000599398 RPUSD2Q8IZ73 545 aaKnown RBP25.83■■□□□ 1.73
CCDC9-204ENST00000599398 C16orf70Q9BSU1 422 aa25.83■■□□□ 1.73
CCDC9-204ENST00000599398 JADE2Q9NQC1 790 aa25.83■■□□□ 1.73
CCDC9-204ENST00000599398 H3BRB1 525 aa25.82■■□□□ 1.72
CCDC9-204ENST00000599398 FGBP02675 491 aa25.82■■□□□ 1.72
CCDC9-204ENST00000599398 KCNA2P16389 499 aa25.82■■□□□ 1.72
CCDC9-204ENST00000599398 CLK2P49760 499 aaKnown RBP25.82■■□□□ 1.72
CCDC9-204ENST00000599398 ANAPC15P60006 121 aa25.82■■□□□ 1.72
CCDC9-204ENST00000599398 UTP14CQ5TAP6 766 aaKnown RBP25.82■■□□□ 1.72
CCDC9-204ENST00000599398 TRIM22Q8IYM9 498 aa25.82■■□□□ 1.72
CCDC9-204ENST00000599398 CCDC155Q8N6L0 562 aa25.82■■□□□ 1.72
CCDC9-204ENST00000599398 MXRA8Q9BRK3 442 aa25.82■■□□□ 1.72
CCDC9-204ENST00000599398 ZMYND12Q9H0C1 365 aa25.82■■□□□ 1.72
CCDC9-204ENST00000599398 TUT1Q9H6E5 874 aaKnown RBP25.82■■□□□ 1.72
CCDC9-204ENST00000599398 SCN5AQ14524 2016 aa25.81■■□□□ 1.72
CCDC9-204ENST00000599398 ESYT2A0FGR8 921 aa25.81■■□□□ 1.72
CCDC9-204ENST00000599398 PITPNM1O00562 1244 aa25.81■■□□□ 1.72
CCDC9-204ENST00000599398 SMAD3P84022 425 aaKnown RBP25.81■■□□□ 1.72
CCDC9-204ENST00000599398 TELO2Q9Y4R8 837 aa25.81■■□□□ 1.72
CCDC9-204ENST00000599398 MAFGO15525 162 aa25.8■■□□□ 1.72
CCDC9-204ENST00000599398 GNA11P29992 359 aa25.8■■□□□ 1.72
CCDC9-204ENST00000599398 ZNF76P36508 570 aa25.8■■□□□ 1.72
CCDC9-204ENST00000599398 SREBF1P36956 1147 aa25.8■■□□□ 1.72
CCDC9-204ENST00000599398 SSRP1Q08945 709 aaKnown RBP25.8■■□□□ 1.72
CCDC9-204ENST00000599398 CPLX2Q6PUV4 134 aaKnown RBP25.8■■□□□ 1.72
CCDC9-204ENST00000599398 OTOP2Q7RTS6 562 aa25.8■■□□□ 1.72
CCDC9-204ENST00000599398 DEFB128Q7Z7B8 93 aa25.8■■□□□ 1.72
CCDC9-204ENST00000599398 REXO1Q8N1G1 1221 aaKnown RBP25.8■■□□□ 1.72
CCDC9-204ENST00000599398 CCDC148Q8NFR7 591 aa25.8■■□□□ 1.72
CCDC9-204ENST00000599398 CYP2W1Q8TAV3 490 aa25.8■■□□□ 1.72
CCDC9-204ENST00000599398 CTAGE1Q96RT6 745 aa25.8■■□□□ 1.72
CCDC9-204ENST00000599398 MTIF3Q9H2K0 278 aaKnown RBP25.8■■□□□ 1.72
CCDC9-204ENST00000599398 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.79■■□□□ 1.72
CCDC9-204ENST00000599398 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.79■■□□□ 1.72
CCDC9-204ENST00000599398 ARHGAP4P98171 946 aa25.79■■□□□ 1.72
CCDC9-204ENST00000599398 CEP55Q53EZ4 464 aa25.79■■□□□ 1.72
CCDC9-204ENST00000599398 TRIM50Q86XT4 487 aa25.79■■□□□ 1.72
CCDC9-204ENST00000599398 CAGE1Q8TC20 777 aa25.79■■□□□ 1.72
CCDC9-204ENST00000599398 KCNH7Q9NS40 1196 aa25.79■■□□□ 1.72
CCDC9-204ENST00000599398 VPS54Q9P1Q0 977 aa25.79■■□□□ 1.72
CCDC9-204ENST00000599398 ZNF215Q9UL58 517 aaPredicted RBP25.79■■□□□ 1.72
CCDC9-204ENST00000599398 TANC1Q9C0D5 1861 aa25.79■■□□□ 1.72
CCDC9-204ENST00000599398 IQCF3P0C7M6 154 aa25.78■■□□□ 1.72
CCDC9-204ENST00000599398 TCF7P36402 384 aaPredicted RBP25.78■■□□□ 1.72
CCDC9-204ENST00000599398 ZNF200P98182 395 aaPredicted RBP25.78■■□□□ 1.72
CCDC9-204ENST00000599398 ZNF697Q5TEC3 545 aa25.78■■□□□ 1.72
CCDC9-204ENST00000599398 BICD2Q8TD16 824 aa25.78■■□□□ 1.72
CCDC9-204ENST00000599398 HERVK_113Q902F9 699 aa25.78■■□□□ 1.72
CCDC9-204ENST00000599398 FAM161BQ96MY7 647 aa25.78■■□□□ 1.72
CCDC9-204ENST00000599398 KAT6AQ92794 2004 aa25.77■■□□□ 1.72
CCDC9-204ENST00000599398 C17orf102A2RUQ5 167 aa25.77■■□□□ 1.72
CCDC9-204ENST00000599398 ADAMTS3O15072 1205 aa25.77■■□□□ 1.72
CCDC9-204ENST00000599398 PFKMP08237 780 aa25.77■■□□□ 1.72
CCDC9-204ENST00000599398 SMIM10L2AP0DMW4 78 aa25.77■■□□□ 1.72
CCDC9-204ENST00000599398 SMIM10L2BP0DMW5 78 aa25.77■■□□□ 1.72
CCDC9-204ENST00000599398 RFC2P35250 354 aa25.77■■□□□ 1.72
CCDC9-204ENST00000599398 MCTP2Q6DN12 878 aa25.77■■□□□ 1.72
CCDC9-204ENST00000599398 FAM109BQ6ICB4 259 aaPredicted RBP25.77■■□□□ 1.72
CCDC9-204ENST00000599398 AFAP1L1Q8TED9 768 aa25.77■■□□□ 1.72
CCDC9-204ENST00000599398 SEPT1Q8WYJ6 367 aa25.77■■□□□ 1.72
CCDC9-204ENST00000599398 DHX38Q92620 1227 aaKnown RBP25.77■■□□□ 1.72
CCDC9-204ENST00000599398 SLKQ9H2G2 1235 aaPredicted RBP25.77■■□□□ 1.72
CCDC9-204ENST00000599398 ZBBXA8MT70 800 aa25.76■■□□□ 1.71
CCDC9-204ENST00000599398 SEC24BO95487 1268 aa25.76■■□□□ 1.71
CCDC9-204ENST00000599398 ARP10275 920 aa25.76■■□□□ 1.71
CCDC9-204ENST00000599398 PTK7Q13308 1070 aa25.76■■□□□ 1.71
CCDC9-204ENST00000599398 RASIP1Q5U651 963 aa25.76■■□□□ 1.71
CCDC9-204ENST00000599398 RASGRP4Q8TDF6 673 aa25.76■■□□□ 1.71
CCDC9-204ENST00000599398 SDF4Q9BRK5 362 aa25.76■■□□□ 1.71
CCDC9-204ENST00000599398 FTOQ9C0B1 505 aaKnown RBP eCLIP25.76■■□□□ 1.71
CCDC9-204ENST00000599398 JPH1Q9HDC5 661 aaPredicted RBP25.76■■□□□ 1.71
CCDC9-204ENST00000599398 CXXC1Q9P0U4 656 aaPredicted RBP25.76■■□□□ 1.71
CCDC9-204ENST00000599398 DEXIO95424 95 aa25.75■■□□□ 1.71
CCDC9-204ENST00000599398 SELPP16109 830 aa25.75■■□□□ 1.71
CCDC9-204ENST00000599398 NLRP5P59047 1200 aa25.75■■□□□ 1.71
CCDC9-204ENST00000599398 HIC1Q14526 733 aa25.75■■□□□ 1.71
CCDC9-204ENST00000599398 ANKRD1Q15327 319 aa25.75■■□□□ 1.71
CCDC9-204ENST00000599398 ATP6V0A1Q93050 837 aa25.75■■□□□ 1.71
CCDC9-204ENST00000599398 SH3GLB2Q9NR46 395 aa25.75■■□□□ 1.71
CCDC9-204ENST00000599398 MTMR10Q9NXD2 777 aa25.75■■□□□ 1.71
CCDC9-204ENST00000599398 SLC9A2Q9UBY0 812 aa25.75■■□□□ 1.71
CCDC9-204ENST00000599398 TPCN1Q9ULQ1 816 aa25.75■■□□□ 1.71
CCDC9-204ENST00000599398 GSTTP1A0A1W2PQM5 241 aa25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms