RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 LY9Q9HBG7 655 aa16.98■□□□□ 0.31
IRF3-223ENST00000599223 RBM8AQ9Y5S9 174 aaKnown RBP16.98■□□□□ 0.31
IRF3-223ENST00000599223 ERICH2A1L162 156 aa16.97■□□□□ 0.31
IRF3-223ENST00000599223 LINC01553A4QN01 128 aa16.97■□□□□ 0.31
IRF3-223ENST00000599223 LGR5O75473 907 aa16.97■□□□□ 0.31
IRF3-223ENST00000599223 PARNO95453 639 aaKnown RBP16.97■□□□□ 0.31
IRF3-223ENST00000599223 SMIM10L2AP0DMW4 78 aa16.97■□□□□ 0.31
IRF3-223ENST00000599223 SMIM10L2BP0DMW5 78 aa16.97■□□□□ 0.31
IRF3-223ENST00000599223 TGFB3P10600 412 aa16.97■□□□□ 0.31
IRF3-223ENST00000599223 THPOP40225 353 aa16.97■□□□□ 0.31
IRF3-223ENST00000599223 ZNF654Q8IZM8 581 aa16.97■□□□□ 0.31
IRF3-223ENST00000599223 IL27Q8NEV9 243 aa16.97■□□□□ 0.31
IRF3-223ENST00000599223 ZBED2Q9BTP6 218 aa16.97■□□□□ 0.31
IRF3-223ENST00000599223 TSPYL2Q9H2G4 693 aaPredicted RBP16.97■□□□□ 0.31
IRF3-223ENST00000599223 MLXIPQ9HAP2 919 aa16.97■□□□□ 0.31
IRF3-223ENST00000599223 H3BRB1 525 aa16.96■□□□□ 0.31
IRF3-223ENST00000599223 TREHO43280 583 aa16.96■□□□□ 0.31
IRF3-223ENST00000599223 PLEKHA8P1O95397 391 aa16.96■□□□□ 0.31
IRF3-223ENST00000599223 ICAM3P32942 547 aa16.96■□□□□ 0.31
IRF3-223ENST00000599223 SART3Q15020 963 aaKnown RBP16.96■□□□□ 0.31
IRF3-223ENST00000599223 USP17L6PQ6QN14 398 aa16.96■□□□□ 0.31
IRF3-223ENST00000599223 CATIPQ7Z7H3 387 aa16.96■□□□□ 0.31
IRF3-223ENST00000599223 DBF4BQ8NFT6 615 aa16.96■□□□□ 0.31
IRF3-223ENST00000599223 MAP4K1Q92918 833 aa16.96■□□□□ 0.31
IRF3-223ENST00000599223 GPR20Q99678 358 aa16.96■□□□□ 0.31
IRF3-223ENST00000599223 SPZ1Q9BXG8 430 aa16.96■□□□□ 0.31
IRF3-223ENST00000599223 TUT1Q9H6E5 874 aaKnown RBP16.96■□□□□ 0.31
IRF3-223ENST00000599223 SUGCTQ9HAC7 445 aa16.96■□□□□ 0.31
IRF3-223ENST00000599223 RTEL1Q9NZ71 1219 aa16.96■□□□□ 0.31
IRF3-223ENST00000599223 COL4A6Q14031 1691 aa16.95■□□□□ 0.3
IRF3-223ENST00000599223 C17orf102A2RUQ5 167 aa16.95■□□□□ 0.3
IRF3-223ENST00000599223 SPATA31C2B4DYI2 1134 aa16.95■□□□□ 0.3
IRF3-223ENST00000599223 CTSHP09668 335 aa16.95■□□□□ 0.3
IRF3-223ENST00000599223 RXRAP19793 462 aa16.95■□□□□ 0.3
IRF3-223ENST00000599223 IKBKEQ14164 716 aa16.95■□□□□ 0.3
IRF3-223ENST00000599223 METTL7BQ6UX53 244 aa16.95■□□□□ 0.3
IRF3-223ENST00000599223 CYFIP1Q7L576 1253 aa16.95■□□□□ 0.3
IRF3-223ENST00000599223 CMTR1Q8N1G2 835 aaKnown RBP16.95■□□□□ 0.3
IRF3-223ENST00000599223 ATP6V0A1Q93050 837 aa16.95■□□□□ 0.3
IRF3-223ENST00000599223 RAD9AQ99638 391 aa16.95■□□□□ 0.3
IRF3-223ENST00000599223 KAT6AQ92794 2004 aa16.95■□□□□ 0.3
IRF3-223ENST00000599223 EMSYQ7Z589 1322 aa16.95■□□□□ 0.3
IRF3-223ENST00000599223 RSPH10B2B2RC85 870 aa16.94■□□□□ 0.3
IRF3-223ENST00000599223 NOP56O00567 594 aaKnown RBP16.94■□□□□ 0.3
IRF3-223ENST00000599223 MEIS2O14770 477 aa16.94■□□□□ 0.3
IRF3-223ENST00000599223 FIBPO43427 364 aa16.94■□□□□ 0.3
IRF3-223ENST00000599223 DDAH1O94760 285 aa16.94■□□□□ 0.3
IRF3-223ENST00000599223 RSPH10BP0C881 870 aa16.94■□□□□ 0.3
IRF3-223ENST00000599223 COL9A1P20849 921 aa16.94■□□□□ 0.3
IRF3-223ENST00000599223 ERVK-21P61565 698 aa16.94■□□□□ 0.3
IRF3-223ENST00000599223 SP4Q02446 784 aa16.94■□□□□ 0.3
IRF3-223ENST00000599223 TRAF1Q13077 416 aa16.94■□□□□ 0.3
IRF3-223ENST00000599223 GNPTABQ3T906 1256 aa16.94■□□□□ 0.3
IRF3-223ENST00000599223 PLEKHG4Q58EX7 1191 aa16.94■□□□□ 0.3
IRF3-223ENST00000599223 C17orf80Q9BSJ5 609 aa16.94■□□□□ 0.3
IRF3-223ENST00000599223 RNPEPQ9H4A4 650 aa16.94■□□□□ 0.3
IRF3-223ENST00000599223 RALGAPA2Q2PPJ7 1873 aa16.94■□□□□ 0.3
IRF3-223ENST00000599223 SH2B2O14492 632 aaPredicted RBP16.93■□□□□ 0.3
IRF3-223ENST00000599223 PRC1O43663 620 aa16.93■□□□□ 0.3
IRF3-223ENST00000599223 EFCAB14O75071 495 aa16.93■□□□□ 0.3
IRF3-223ENST00000599223 AAK1Q2M2I8 961 aa16.93■□□□□ 0.3
IRF3-223ENST00000599223 PCNX4Q63HM2 1172 aa16.93■□□□□ 0.3
IRF3-223ENST00000599223 RAB11FIP4Q86YS3 637 aa16.93■□□□□ 0.3
IRF3-223ENST00000599223 MYOCDQ8IZQ8 938 aa16.93■□□□□ 0.3
IRF3-223ENST00000599223 SRBD1Q8N5C6 995 aaKnown RBP16.93■□□□□ 0.3
IRF3-223ENST00000599223 LMBR1Q8WVP7 490 aa16.93■□□□□ 0.3
IRF3-223ENST00000599223 TGS1Q96RS0 853 aaKnown RBP16.93■□□□□ 0.3
IRF3-223ENST00000599223 LSG1Q9H089 658 aaKnown RBP16.93■□□□□ 0.3
IRF3-223ENST00000599223 SETD4Q9NVD3 440 aa16.93■□□□□ 0.3
IRF3-223ENST00000599223 hCG_1642624A0A1W2PR95 340 aa16.92■□□□□ 0.3
IRF3-223ENST00000599223 PIK3CDO00329 1044 aa16.92■□□□□ 0.3
IRF3-223ENST00000599223 STAM2O75886 525 aa16.92■□□□□ 0.3
IRF3-223ENST00000599223 ADAM17P78536 824 aa16.92■□□□□ 0.3
IRF3-223ENST00000599223 HTRA4P83105 476 aaPredicted RBP16.92■□□□□ 0.3
IRF3-223ENST00000599223 NEDD9Q14511 834 aa16.92■□□□□ 0.3
IRF3-223ENST00000599223 CTCFLQ8NI51 663 aaPredicted RBP16.92■□□□□ 0.3
IRF3-223ENST00000599223 SMARCC2Q8TAQ2 1214 aa16.92■□□□□ 0.3
IRF3-223ENST00000599223 SP7Q8TDD2 431 aaPredicted RBP16.92■□□□□ 0.3
IRF3-223ENST00000599223 HLA-CQ95604 372 aa16.92■□□□□ 0.3
IRF3-223ENST00000599223 RRP36Q96EU6 259 aaKnown RBP16.92■□□□□ 0.3
IRF3-223ENST00000599223 MAP3K14Q99558 947 aa16.92■□□□□ 0.3
IRF3-223ENST00000599223 COG5Q9UP83 839 aa16.92■□□□□ 0.3
IRF3-223ENST00000599223 MYO7AQ13402 2215 aa16.91■□□□□ 0.3
IRF3-223ENST00000599223 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.91■□□□□ 0.3
IRF3-223ENST00000599223 UTP14CQ5TAP6 766 aaKnown RBP16.91■□□□□ 0.3
IRF3-223ENST00000599223 USP26Q9BXU7 913 aa16.91■□□□□ 0.3
IRF3-223ENST00000599223 LOXHD1Q8IVV2 1947 aa16.9■□□□□ 0.3
IRF3-223ENST00000599223 SLC27A2O14975 620 aa16.9■□□□□ 0.3
IRF3-223ENST00000599223 ATP9AO75110 1047 aa16.9■□□□□ 0.3
IRF3-223ENST00000599223 AMHP03971 560 aa16.9■□□□□ 0.3
IRF3-223ENST00000599223 KCNA2P16389 499 aa16.9■□□□□ 0.3
IRF3-223ENST00000599223 ITGB5P18084 799 aa16.9■□□□□ 0.3
IRF3-223ENST00000599223 KIF5BP33176 963 aa16.9■□□□□ 0.3
IRF3-223ENST00000599223 UBE2SQ16763 222 aa16.9■□□□□ 0.3
IRF3-223ENST00000599223 RUFY4Q6ZNE9 571 aa16.9■□□□□ 0.3
IRF3-223ENST00000599223 SKAP1Q86WV1 359 aa16.9■□□□□ 0.3
IRF3-223ENST00000599223 KHSRPQ92945 711 aaKnown RBP eCLIP16.9■□□□□ 0.3
IRF3-223ENST00000599223 LRRC2Q9BYS8 371 aa16.9■□□□□ 0.3
IRF3-223ENST00000599223 PPP4R2Q9NY27 417 aa16.9■□□□□ 0.3
IRF3-223ENST00000599223 SEC63Q9UGP8 760 aaKnown RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms