RNA–Protein interactions for RNA: ENST00000599097.1

HOMER3-210, Transcript of homer scaffold protein 3, humanhuman

TSL 3

Gene HOMER3, Length 770 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-210ENST00000599097 TET1Q8NFU7 2136 aa20.11■□□□□ 0.81
HOMER3-210ENST00000599097 CYTH3O43739 400 aa20.11■□□□□ 0.81
HOMER3-210ENST00000599097 TEX2Q8IWB9 1127 aa20.11■□□□□ 0.81
HOMER3-210ENST00000599097 MB21D2Q8IYB1 491 aaPredicted RBP20.11■□□□□ 0.81
HOMER3-210ENST00000599097 IGDCC4Q8TDY8 1250 aa20.11■□□□□ 0.81
HOMER3-210ENST00000599097 SEPT8Q92599 483 aa20.11■□□□□ 0.81
HOMER3-210ENST00000599097 HLA-CQ95604 372 aa20.11■□□□□ 0.81
HOMER3-210ENST00000599097 EHMT1Q9H9B1 1298 aa20.11■□□□□ 0.81
HOMER3-210ENST00000599097 RBM8AQ9Y5S9 174 aaKnown RBP20.11■□□□□ 0.81
HOMER3-210ENST00000599097 SPATA31C2B4DYI2 1134 aa20.1■□□□□ 0.81
HOMER3-210ENST00000599097 RPLP2P05387 115 aaKnown RBP20.1■□□□□ 0.81
HOMER3-210ENST00000599097 SMIM10L2AP0DMW4 78 aa20.1■□□□□ 0.81
HOMER3-210ENST00000599097 SMIM10L2BP0DMW5 78 aa20.1■□□□□ 0.81
HOMER3-210ENST00000599097 SP2Q02086 613 aa20.1■□□□□ 0.81
HOMER3-210ENST00000599097 GRB10Q13322 594 aa20.1■□□□□ 0.81
HOMER3-210ENST00000599097 APBB2Q92870 758 aa20.1■□□□□ 0.81
HOMER3-210ENST00000599097 SAMD11Q96NU1 681 aa20.1■□□□□ 0.81
HOMER3-210ENST00000599097 PRRC2BQ5JSZ5 2229 aaKnown RBP20.1■□□□□ 0.81
HOMER3-210ENST00000599097 PRC1O43663 620 aa20.09■□□□□ 0.81
HOMER3-210ENST00000599097 HOXC8P31273 242 aa20.09■□□□□ 0.81
HOMER3-210ENST00000599097 DEFB103AP81534 67 aa20.09■□□□□ 0.81
HOMER3-210ENST00000599097 GPNMBQ14956 572 aa20.09■□□□□ 0.81
HOMER3-210ENST00000599097 CYFIP1Q7L576 1253 aa20.09■□□□□ 0.81
HOMER3-210ENST00000599097 GPRASP2Q96D09 838 aa20.09■□□□□ 0.81
HOMER3-210ENST00000599097 LY9Q9HBG7 655 aa20.09■□□□□ 0.81
HOMER3-210ENST00000599097 BDP1A6H8Y1 2624 aa20.08■□□□□ 0.81
HOMER3-210ENST00000599097 SORBS3O60504 671 aa20.08■□□□□ 0.81
HOMER3-210ENST00000599097 LIFRP42702 1097 aa20.08■□□□□ 0.81
HOMER3-210ENST00000599097 ANTXR2P58335 489 aa20.08■□□□□ 0.81
HOMER3-210ENST00000599097 ERVK-21P61565 698 aa20.08■□□□□ 0.81
HOMER3-210ENST00000599097 SLC35G1Q2M3R5 365 aa20.08■□□□□ 0.81
HOMER3-210ENST00000599097 RNF20Q5VTR2 975 aa20.08■□□□□ 0.81
HOMER3-210ENST00000599097 SYNE3Q6ZMZ3 975 aa20.08■□□□□ 0.81
HOMER3-210ENST00000599097 RSPH3Q86UC2 560 aa20.08■□□□□ 0.81
HOMER3-210ENST00000599097 PIBF1Q8WXW3 757 aa20.08■□□□□ 0.81
HOMER3-210ENST00000599097 TNPO1Q92973 898 aaKnown RBP20.08■□□□□ 0.81
HOMER3-210ENST00000599097 C1QTNF1Q9BXJ1 281 aa20.08■□□□□ 0.81
HOMER3-210ENST00000599097 BAZ2BQ9UIF8 2168 aaKnown RBP20.08■□□□□ 0.8
HOMER3-210ENST00000599097 NRCAMQ92823 1304 aa20.07■□□□□ 0.8
HOMER3-210ENST00000599097 SPDYE3A6NKU9 549 aa20.07■□□□□ 0.8
HOMER3-210ENST00000599097 RFXAPO00287 272 aa20.07■□□□□ 0.8
HOMER3-210ENST00000599097 MAFGO15525 162 aa20.07■□□□□ 0.8
HOMER3-210ENST00000599097 MRPS9P82933 396 aaKnown RBP20.07■□□□□ 0.8
HOMER3-210ENST00000599097 ZNF200P98182 395 aaPredicted RBP20.07■□□□□ 0.8
HOMER3-210ENST00000599097 PTPROQ16827 1216 aa20.07■□□□□ 0.8
HOMER3-210ENST00000599097 PLEKHG4Q58EX7 1191 aa20.07■□□□□ 0.8
HOMER3-210ENST00000599097 TAF2Q6P1X5 1199 aa20.07■□□□□ 0.8
HOMER3-210ENST00000599097 TRAF7Q6Q0C0 670 aa20.07■□□□□ 0.8
HOMER3-210ENST00000599097 MYOCDQ8IZQ8 938 aa20.07■□□□□ 0.8
HOMER3-210ENST00000599097 GPR20Q99678 358 aa20.07■□□□□ 0.8
HOMER3-210ENST00000599097 PSTPIP2Q9H939 334 aa20.07■□□□□ 0.8
HOMER3-210ENST00000599097 SENP2Q9HC62 589 aa20.07■□□□□ 0.8
HOMER3-210ENST00000599097 SLC12A7Q9Y666 1083 aa20.07■□□□□ 0.8
HOMER3-210ENST00000599097 LINC01553A4QN01 128 aa20.06■□□□□ 0.8
HOMER3-210ENST00000599097 EPOPA6NHQ4 379 aa20.06■□□□□ 0.8
HOMER3-210ENST00000599097 BMP1P13497 986 aa20.06■□□□□ 0.8
HOMER3-210ENST00000599097 FBXO22Q8NEZ5 403 aa20.06■□□□□ 0.8
HOMER3-210ENST00000599097 DBF4BQ8NFT6 615 aa20.06■□□□□ 0.8
HOMER3-210ENST00000599097 RNPEPQ9H4A4 650 aa20.06■□□□□ 0.8
HOMER3-210ENST00000599097 RTEL1Q9NZ71 1219 aa20.06■□□□□ 0.8
HOMER3-210ENST00000599097 LCHNA4D1U4 455 aa20.05■□□□□ 0.8
HOMER3-210ENST00000599097 SH2B2O14492 632 aaPredicted RBP20.05■□□□□ 0.8
HOMER3-210ENST00000599097 TFF2Q03403 129 aa20.05■□□□□ 0.8
HOMER3-210ENST00000599097 MBTPS1Q14703 1052 aa20.05■□□□□ 0.8
HOMER3-210ENST00000599097 USP17L6PQ6QN14 398 aa20.05■□□□□ 0.8
HOMER3-210ENST00000599097 GDPD5Q8WTR4 605 aa20.05■□□□□ 0.8
HOMER3-210ENST00000599097 GPKOWQ92917 476 aaPredicted RBP eCLIP20.05■□□□□ 0.8
HOMER3-210ENST00000599097 WNT8BQ93098 351 aa20.05■□□□□ 0.8
HOMER3-210ENST00000599097 YME1L1Q96TA2 773 aa20.05■□□□□ 0.8
HOMER3-210ENST00000599097 COL4A4P53420 1690 aaPredicted RBP20.05■□□□□ 0.8
HOMER3-210ENST00000599097 MEIS2O14770 477 aa20.04■□□□□ 0.8
HOMER3-210ENST00000599097 TREHO43280 583 aa20.04■□□□□ 0.8
HOMER3-210ENST00000599097 HTRA4P83105 476 aaPredicted RBP20.04■□□□□ 0.8
HOMER3-210ENST00000599097 ARHGAP4P98171 946 aa20.04■□□□□ 0.8
HOMER3-210ENST00000599097 FAM117BQ6P1L5 589 aa20.04■□□□□ 0.8
HOMER3-210ENST00000599097 ERAP1Q9NZ08 941 aa20.04■□□□□ 0.8
HOMER3-210ENST00000599097 PTPRSQ13332 1948 aa20.04■□□□□ 0.8
HOMER3-210ENST00000599097 COL4A6Q14031 1691 aa20.03■□□□□ 0.8
HOMER3-210ENST00000599097 hCG_1984214I3L0E3 225 aa20.03■□□□□ 0.8
HOMER3-210ENST00000599097 LPXNO60711 386 aa20.03■□□□□ 0.8
HOMER3-210ENST00000599097 ARHGEF15O94989 841 aa20.03■□□□□ 0.8
HOMER3-210ENST00000599097 MTMR1Q13613 665 aa20.03■□□□□ 0.8
HOMER3-210ENST00000599097 TIGD5Q53EQ6 642 aa20.03■□□□□ 0.8
HOMER3-210ENST00000599097 UTP14CQ5TAP6 766 aaKnown RBP20.03■□□□□ 0.8
HOMER3-210ENST00000599097 RPAINQ86UA6 219 aa20.03■□□□□ 0.8
HOMER3-210ENST00000599097 ZNF713Q8N859 430 aaPredicted RBP20.03■□□□□ 0.8
HOMER3-210ENST00000599097 SP7Q8TDD2 431 aaPredicted RBP20.03■□□□□ 0.8
HOMER3-210ENST00000599097 SEPT1Q8WYJ6 367 aa20.03■□□□□ 0.8
HOMER3-210ENST00000599097 ZFP91Q96JP5 570 aaPredicted RBP20.03■□□□□ 0.8
HOMER3-210ENST00000599097 MYL10Q9BUA6 226 aa20.03■□□□□ 0.8
HOMER3-210ENST00000599097 IFIH1Q9BYX4 1025 aaKnown RBP20.03■□□□□ 0.8
HOMER3-210ENST00000599097 GLT8D2Q9H1C3 349 aa20.03■□□□□ 0.8
HOMER3-210ENST00000599097 SUGCTQ9HAC7 445 aa20.03■□□□□ 0.8
HOMER3-210ENST00000599097 SETD4Q9NVD3 440 aa20.03■□□□□ 0.8
HOMER3-210ENST00000599097 RBM28Q9NW13 759 aaKnown RBP20.03■□□□□ 0.8
HOMER3-210ENST00000599097 MTUS1Q9ULD2 1270 aa20.03■□□□□ 0.8
HOMER3-210ENST00000599097 RWDD3Q9Y3V2 267 aa20.03■□□□□ 0.8
HOMER3-210ENST00000599097 TAF6LQ9Y6J9 622 aa20.03■□□□□ 0.8
HOMER3-210ENST00000599097 SIP14410 1827 aa20.03■□□□□ 0.8
HOMER3-210ENST00000599097 MICAL3Q7RTP6 2002 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms