RNA–Protein interactions for RNA: ENST00000598607.1

GTF2F1-206, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 4

Gene GTF2F1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-206ENST00000598607 TDP2O95551 362 aa17.12■□□□□ 0.33
GTF2F1-206ENST00000598607 MNX1P50219 401 aaPredicted RBP17.12■□□□□ 0.33
GTF2F1-206ENST00000598607 BEX3Q00994 111 aa17.12■□□□□ 0.33
GTF2F1-206ENST00000598607 CCSAPQ6IQ19 270 aaPredicted RBP17.12■□□□□ 0.33
GTF2F1-206ENST00000598607 CYFIP1Q7L576 1253 aa17.12■□□□□ 0.33
GTF2F1-206ENST00000598607 PPTC7Q8NI37 304 aa17.12■□□□□ 0.33
GTF2F1-206ENST00000598607 PAWRQ96IZ0 340 aaKnown RBP17.12■□□□□ 0.33
GTF2F1-206ENST00000598607 SPATA33Q96N06 139 aa17.12■□□□□ 0.33
GTF2F1-206ENST00000598607 MBOAT7Q96N66 472 aa17.12■□□□□ 0.33
GTF2F1-206ENST00000598607 ZNF577Q9BSK1 485 aa17.12■□□□□ 0.33
GTF2F1-206ENST00000598607 C11orf49Q9H6J7 331 aa17.12■□□□□ 0.33
GTF2F1-206ENST00000598607 TBC1D22BQ9NU19 505 aa17.12■□□□□ 0.33
GTF2F1-206ENST00000598607 DDX25Q9UHL0 483 aaKnown RBP17.12■□□□□ 0.33
GTF2F1-206ENST00000598607 TCEAL9Q9UHQ7 104 aa17.12■□□□□ 0.33
GTF2F1-206ENST00000598607 VPS37CA5D8V6 355 aaPredicted RBP17.11■□□□□ 0.33
GTF2F1-206ENST00000598607 FAM205CA6NFA0 338 aa17.11■□□□□ 0.33
GTF2F1-206ENST00000598607 KIF28PB7ZC32 967 aa17.11■□□□□ 0.33
GTF2F1-206ENST00000598607 IPO5O00410 1097 aaKnown RBP17.11■□□□□ 0.33
GTF2F1-206ENST00000598607 CABYRO75952 493 aa17.11■□□□□ 0.33
GTF2F1-206ENST00000598607 ASGR1P07306 291 aa17.11■□□□□ 0.33
GTF2F1-206ENST00000598607 MMP3P08254 477 aa17.11■□□□□ 0.33
GTF2F1-206ENST00000598607 SYT1P21579 422 aa17.11■□□□□ 0.33
GTF2F1-206ENST00000598607 PTGS1P23219 599 aa17.11■□□□□ 0.33
GTF2F1-206ENST00000598607 TRAPPC10P48553 1259 aa17.11■□□□□ 0.33
GTF2F1-206ENST00000598607 ACLYP53396 1101 aa17.11■□□□□ 0.33
GTF2F1-206ENST00000598607 DGKDQ16760 1214 aa17.11■□□□□ 0.33
GTF2F1-206ENST00000598607 AFG1LQ8WV93 481 aa17.11■□□□□ 0.33
GTF2F1-206ENST00000598607 LENG9Q96B70 501 aa17.11■□□□□ 0.33
GTF2F1-206ENST00000598607 GLT1D1Q96MS3 346 aa17.11■□□□□ 0.33
GTF2F1-206ENST00000598607 PKD2L1Q9P0L9 805 aa17.11■□□□□ 0.33
GTF2F1-206ENST00000598607 SORBS3O60504 671 aa17.1■□□□□ 0.33
GTF2F1-206ENST00000598607 COL6A1P12109 1028 aa17.1■□□□□ 0.33
GTF2F1-206ENST00000598607 IRX5P78411 483 aaPredicted RBP17.1■□□□□ 0.33
GTF2F1-206ENST00000598607 ORC2Q13416 577 aaPredicted RBP17.1■□□□□ 0.33
GTF2F1-206ENST00000598607 UBE2Q1Q7Z7E8 422 aa17.1■□□□□ 0.33
GTF2F1-206ENST00000598607 DIS3LQ8TF46 1054 aaKnown RBP17.1■□□□□ 0.33
GTF2F1-206ENST00000598607 JPH1Q9HDC5 661 aaPredicted RBP17.1■□□□□ 0.33
GTF2F1-206ENST00000598607 SLC9A2Q9UBY0 812 aa17.1■□□□□ 0.33
GTF2F1-206ENST00000598607 A0A1W2PQ45 241 aaPredicted RBP17.09■□□□□ 0.33
GTF2F1-206ENST00000598607 A0A1W2PQY0 241 aa17.09■□□□□ 0.33
GTF2F1-206ENST00000598607 TBX3O15119 743 aa17.09■□□□□ 0.33
GTF2F1-206ENST00000598607 MSH4O15457 936 aa17.09■□□□□ 0.33
GTF2F1-206ENST00000598607 STX6O43752 255 aa17.09■□□□□ 0.33
GTF2F1-206ENST00000598607 PPFIA4O75335 1185 aa17.09■□□□□ 0.33
GTF2F1-206ENST00000598607 BAG4O95429 457 aaKnown RBP17.09■□□□□ 0.33
GTF2F1-206ENST00000598607 MYL3P08590 195 aa17.09■□□□□ 0.33
GTF2F1-206ENST00000598607 HSDL1Q3SXM5 330 aa17.09■□□□□ 0.33
GTF2F1-206ENST00000598607 BRAPQ7Z569 592 aa17.09■□□□□ 0.33
GTF2F1-206ENST00000598607 RIT2Q99578 217 aa17.09■□□□□ 0.33
GTF2F1-206ENST00000598607 HTATIP2Q9BUP3 242 aa17.09■□□□□ 0.33
GTF2F1-206ENST00000598607 SENP6Q9GZR1 1112 aaPredicted RBP17.09■□□□□ 0.33
GTF2F1-206ENST00000598607 STARD7Q9NQZ5 370 aa17.09■□□□□ 0.33
GTF2F1-206ENST00000598607 ELP1O95163 1332 aa17.09■□□□□ 0.33
GTF2F1-206ENST00000598607 MARCH6O60337 910 aa17.08■□□□□ 0.32
GTF2F1-206ENST00000598607 GAS7O60861 476 aa17.08■□□□□ 0.32
GTF2F1-206ENST00000598607 HOXD8P13378 290 aaPredicted RBP17.08■□□□□ 0.32
GTF2F1-206ENST00000598607 RGS19P49795 217 aa17.08■□□□□ 0.32
GTF2F1-206ENST00000598607 PURAQ00577 322 aaKnown RBP17.08■□□□□ 0.32
GTF2F1-206ENST00000598607 KRT76Q01546 638 aa17.08■□□□□ 0.32
GTF2F1-206ENST00000598607 SP4Q02446 784 aa17.08■□□□□ 0.32
GTF2F1-206ENST00000598607 ITGB3BPQ13352 177 aaPredicted RBP17.08■□□□□ 0.32
GTF2F1-206ENST00000598607 RILPL1Q5EBL4 403 aa17.08■□□□□ 0.32
GTF2F1-206ENST00000598607 TTC38Q5R3I4 469 aa17.08■□□□□ 0.32
GTF2F1-206ENST00000598607 CXCL17Q6UXB2 119 aa17.08■□□□□ 0.32
GTF2F1-206ENST00000598607 SPRYD3Q8NCJ5 442 aa17.08■□□□□ 0.32
GTF2F1-206ENST00000598607 SEPT1Q8WYJ6 367 aa17.08■□□□□ 0.32
GTF2F1-206ENST00000598607 SLC5A5Q92911 643 aa17.08■□□□□ 0.32
GTF2F1-206ENST00000598607 FERMT2Q96AC1 680 aa17.08■□□□□ 0.32
GTF2F1-206ENST00000598607 VTI1AQ96AJ9 217 aa17.08■□□□□ 0.32
GTF2F1-206ENST00000598607 FAM20AQ96MK3 541 aa17.08■□□□□ 0.32
GTF2F1-206ENST00000598607 GPR20Q99678 358 aa17.08■□□□□ 0.32
GTF2F1-206ENST00000598607 MTG1Q9BT17 334 aaPredicted RBP17.08■□□□□ 0.32
GTF2F1-206ENST00000598607 KATNAL1Q9BW62 490 aa17.08■□□□□ 0.32
GTF2F1-206ENST00000598607 TEKT3Q9BXF9 490 aa17.08■□□□□ 0.32
GTF2F1-206ENST00000598607 SEZ6LQ9BYH1 1024 aa17.08■□□□□ 0.32
GTF2F1-206ENST00000598607 TRIP12Q14669 1992 aaPredicted RBP17.08■□□□□ 0.32
GTF2F1-206ENST00000598607 DDX39AO00148 427 aaKnown RBP17.07■□□□□ 0.32
GTF2F1-206ENST00000598607 DHX15O43143 795 aaKnown RBP17.07■□□□□ 0.32
GTF2F1-206ENST00000598607 SLC37A4O43826 429 aa17.07■□□□□ 0.32
GTF2F1-206ENST00000598607 NEMFO60524 1076 aa17.07■□□□□ 0.32
GTF2F1-206ENST00000598607 ATP2B1P20020 1258 aa17.07■□□□□ 0.32
GTF2F1-206ENST00000598607 ANP32AP39687 249 aaKnown RBP17.07■□□□□ 0.32
GTF2F1-206ENST00000598607 LRCH2Q5VUJ6 765 aa17.07■□□□□ 0.32
GTF2F1-206ENST00000598607 ZNF746Q6NUN9 644 aaPredicted RBP17.07■□□□□ 0.32
GTF2F1-206ENST00000598607 SLFN12Q8IYM2 578 aa17.07■□□□□ 0.32
GTF2F1-206ENST00000598607 ETNPPLQ8TBG4 499 aa17.07■□□□□ 0.32
GTF2F1-206ENST00000598607 BCAS3Q9H6U6 928 aa17.07■□□□□ 0.32
GTF2F1-206ENST00000598607 KCNMB3Q9NPA1 279 aa17.07■□□□□ 0.32
GTF2F1-206ENST00000598607 A0A0U1RQG5 324 aaPredicted RBP17.06■□□□□ 0.32
GTF2F1-206ENST00000598607 TCF7P36402 384 aaPredicted RBP17.06■□□□□ 0.32
GTF2F1-206ENST00000598607 ACTR2P61160 394 aa17.06■□□□□ 0.32
GTF2F1-206ENST00000598607 CALCRLQ16602 461 aa17.06■□□□□ 0.32
GTF2F1-206ENST00000598607 POTEDQ86YR6 584 aa17.06■□□□□ 0.32
GTF2F1-206ENST00000598607 SMAP1Q8IYB5 467 aaPredicted RBP17.06■□□□□ 0.32
GTF2F1-206ENST00000598607 ZSCAN16Q9H4T2 348 aaPredicted RBP17.06■□□□□ 0.32
GTF2F1-206ENST00000598607 MROH7Q68CQ1 1323 aa17.05■□□□□ 0.32
GTF2F1-206ENST00000598607 GSTTP1A0A1W2PQM5 241 aa17.05■□□□□ 0.32
GTF2F1-206ENST00000598607 PSMD10O75832 226 aa17.05■□□□□ 0.32
GTF2F1-206ENST00000598607 LGALS2P05162 132 aa17.05■□□□□ 0.32
GTF2F1-206ENST00000598607 SFNP31947 248 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms