RNA–Protein interactions for RNA: ENST00000598362.1

GRAMD1A-208, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 776 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-208ENST00000598362 SMC3Q9UQE7 1217 aa8.58□□□□□ -1.04
GRAMD1A-208ENST00000598362 GNEQ9Y223 722 aaKnown RBP8.58□□□□□ -1.04
GRAMD1A-208ENST00000598362 KIF3AQ9Y496 699 aa8.58□□□□□ -1.04
GRAMD1A-208ENST00000598362 MRVI1Q9Y6F6 885 aa8.58□□□□□ -1.04
GRAMD1A-208ENST00000598362 LTBP2Q14767 1821 aa8.58□□□□□ -1.04
GRAMD1A-208ENST00000598362 KIAA1217Q5T5P2 1943 aa8.57□□□□□ -1.04
GRAMD1A-208ENST00000598362 CCDC194A0A1B0GVG4 234 aa8.57□□□□□ -1.04
GRAMD1A-208ENST00000598362 MYADML2A6NDP7 307 aa8.57□□□□□ -1.04
GRAMD1A-208ENST00000598362 NKRFO15226 690 aaKnown RBP eCLIP8.57□□□□□ -1.04
GRAMD1A-208ENST00000598362 ADAMTS4O75173 837 aa8.57□□□□□ -1.04
GRAMD1A-208ENST00000598362 DUSP11O75319 330 aaKnown RBP8.57□□□□□ -1.04
GRAMD1A-208ENST00000598362 UBA1P22314 1058 aaKnown RBP8.57□□□□□ -1.04
GRAMD1A-208ENST00000598362 IGFBP4P22692 258 aa8.57□□□□□ -1.04
GRAMD1A-208ENST00000598362 ITGB8P26012 769 aa8.57□□□□□ -1.04
GRAMD1A-208ENST00000598362 SEMA3FQ13275 785 aa8.57□□□□□ -1.04
GRAMD1A-208ENST00000598362 PPIGQ13427 754 aaKnown RBP eCLIP8.57□□□□□ -1.043e-6■■□□□ 13.9
GRAMD1A-208ENST00000598362 NONOQ15233 471 aaKnown RBP eCLIP8.57□□□□□ -1.04
GRAMD1A-208ENST00000598362 RAB30Q15771 203 aa8.57□□□□□ -1.04
GRAMD1A-208ENST00000598362 DUSP28Q4G0W2 176 aa8.57□□□□□ -1.04
GRAMD1A-208ENST00000598362 TMEM31Q5JXX7 168 aa8.57□□□□□ -1.04
GRAMD1A-208ENST00000598362 TMEM63BQ5T3F8 832 aa8.57□□□□□ -1.04
GRAMD1A-208ENST00000598362 IQSEC1Q6DN90 963 aa8.57□□□□□ -1.04
GRAMD1A-208ENST00000598362 KRT25Q7Z3Z0 450 aa8.57□□□□□ -1.04
GRAMD1A-208ENST00000598362 RNF180Q86T96 592 aa8.57□□□□□ -1.04
GRAMD1A-208ENST00000598362 NLRX1Q86UT6 975 aa8.57□□□□□ -1.04
GRAMD1A-208ENST00000598362 DIS3L2Q8IYB7 885 aaKnown RBP8.57□□□□□ -1.04
GRAMD1A-208ENST00000598362 OR6J1Q8NGC5 347 aa8.57□□□□□ -1.04
GRAMD1A-208ENST00000598362 OXER1Q8TDS5 423 aa8.57□□□□□ -1.04
GRAMD1A-208ENST00000598362 CRYGNQ8WXF5 182 aa8.57□□□□□ -1.04
GRAMD1A-208ENST00000598362 COPS5Q92905 334 aa8.57□□□□□ -1.04
GRAMD1A-208ENST00000598362 TNFRSF25Q93038 417 aa8.57□□□□□ -1.04
GRAMD1A-208ENST00000598362 INPP4AQ96PE3 977 aaPredicted RBP8.57□□□□□ -1.04
GRAMD1A-208ENST00000598362 WDR11Q9BZH6 1224 aa8.57□□□□□ -1.04
GRAMD1A-208ENST00000598362 UPF3AQ9H1J1 476 aaKnown RBP8.57□□□□□ -1.04
GRAMD1A-208ENST00000598362 UBIAD1Q9Y5Z9 338 aa8.57□□□□□ -1.04
GRAMD1A-208ENST00000598362 FAM205CA6NFA0 338 aa8.56□□□□□ -1.04
GRAMD1A-208ENST00000598362 FIBPO43427 364 aa8.56□□□□□ -1.04
GRAMD1A-208ENST00000598362 PGK1P00558 417 aa8.56□□□□□ -1.04
GRAMD1A-208ENST00000598362 TIMP1P01033 207 aa8.56□□□□□ -1.04
GRAMD1A-208ENST00000598362 CYP3A4P08684 503 aa8.56□□□□□ -1.04
GRAMD1A-208ENST00000598362 TXNP10599 105 aaKnown RBP8.56□□□□□ -1.04
GRAMD1A-208ENST00000598362 ITGB5P18084 799 aa8.56□□□□□ -1.04
GRAMD1A-208ENST00000598362 CST5P28325 142 aaPredicted RBP8.56□□□□□ -1.04
GRAMD1A-208ENST00000598362 ICAM3P32942 547 aa8.56□□□□□ -1.04
GRAMD1A-208ENST00000598362 GJA9P57773 515 aa8.56□□□□□ -1.04
GRAMD1A-208ENST00000598362 SETQ01105 290 aaPredicted RBP8.56□□□□□ -1.04
GRAMD1A-208ENST00000598362 NR5A1Q13285 461 aa8.56□□□□□ -1.04
GRAMD1A-208ENST00000598362 MTMR1Q13613 665 aa8.56□□□□□ -1.04
GRAMD1A-208ENST00000598362 SAFBQ15424 915 aaKnown RBP eCLIP8.56□□□□□ -1.04
GRAMD1A-208ENST00000598362 LY6KQ17RY6 165 aa8.56□□□□□ -1.04
GRAMD1A-208ENST00000598362 EARS2Q5JPH6 523 aaKnown RBP8.56□□□□□ -1.04
GRAMD1A-208ENST00000598362 MFSD5Q6N075 450 aa8.56□□□□□ -1.04
GRAMD1A-208ENST00000598362 CCDC62Q6P9F0 684 aa8.56□□□□□ -1.04
GRAMD1A-208ENST00000598362 PIK3AP1Q6ZUJ8 805 aa8.56□□□□□ -1.04
GRAMD1A-208ENST00000598362 ANKRD33Q7Z3H0 272 aa8.56□□□□□ -1.04
GRAMD1A-208ENST00000598362 FBXO18Q8NFZ0 1043 aa8.56□□□□□ -1.04
GRAMD1A-208ENST00000598362 TBCKQ8TEA7 893 aa8.56□□□□□ -1.04
GRAMD1A-208ENST00000598362 GPRASP2Q96D09 838 aa8.56□□□□□ -1.04
GRAMD1A-208ENST00000598362 INTS4Q96HW7 963 aaKnown RBP8.56□□□□□ -1.04
GRAMD1A-208ENST00000598362 MXRA8Q9BRK3 442 aa8.56□□□□□ -1.04
GRAMD1A-208ENST00000598362 TSEN34Q9BSV6 310 aaKnown RBP8.56□□□□□ -1.04
GRAMD1A-208ENST00000598362 PBX4Q9BYU1 374 aa8.56□□□□□ -1.04
GRAMD1A-208ENST00000598362 SLC28A3Q9HAS3 691 aa8.56□□□□□ -1.04
GRAMD1A-208ENST00000598362 JADE2Q9NQC1 790 aa8.56□□□□□ -1.04
GRAMD1A-208ENST00000598362 FOXD4L1Q9NU39 408 aa8.56□□□□□ -1.04
GRAMD1A-208ENST00000598362 RTEL1Q9NZ71 1219 aa8.56□□□□□ -1.04
GRAMD1A-208ENST00000598362 DDX41Q9UJV9 622 aaKnown RBP8.56□□□□□ -1.04
GRAMD1A-208ENST00000598362 Q9Y3F1 56 aa8.56□□□□□ -1.04
GRAMD1A-208ENST00000598362 MYH7BA7E2Y1 1941 aa8.56□□□□□ -1.04
GRAMD1A-208ENST00000598362 IGLV3-22A0A075B6J6 115 aa8.55□□□□□ -1.04
GRAMD1A-208ENST00000598362 BTBD18B2RXH4 712 aa8.55□□□□□ -1.04
GRAMD1A-208ENST00000598362 SPATA31C2B4DYI2 1134 aa8.55□□□□□ -1.04
GRAMD1A-208ENST00000598362 KIF28PB7ZC32 967 aa8.55□□□□□ -1.04
GRAMD1A-208ENST00000598362 FAM86B1E9PN63 330 aa8.55□□□□□ -1.04
GRAMD1A-208ENST00000598362 CTAGE5O15320 804 aa8.55□□□□□ -1.04
GRAMD1A-208ENST00000598362 DYNC1LI2O43237 492 aaPredicted RBP8.55□□□□□ -1.04
GRAMD1A-208ENST00000598362 PQBP1O60828 265 aaKnown RBP8.55□□□□□ -1.04
GRAMD1A-208ENST00000598362 GPR37L1O60883 481 aa8.55□□□□□ -1.04
GRAMD1A-208ENST00000598362 TDP2O95551 362 aa8.55□□□□□ -1.04
GRAMD1A-208ENST00000598362 GGPS1O95749 300 aa8.55□□□□□ -1.04
GRAMD1A-208ENST00000598362 GH1P01241 217 aa8.55□□□□□ -1.04
GRAMD1A-208ENST00000598362 FAM86B2P0C5J1 330 aa8.55□□□□□ -1.04
GRAMD1A-208ENST00000598362 C6orf222P0C671 652 aaPredicted RBP8.55□□□□□ -1.04
GRAMD1A-208ENST00000598362 KCNA2P16389 499 aa8.55□□□□□ -1.04
GRAMD1A-208ENST00000598362 CIITAP33076 1130 aa8.55□□□□□ -1.04
GRAMD1A-208ENST00000598362 ZNF76P36508 570 aa8.55□□□□□ -1.04
GRAMD1A-208ENST00000598362 NKX3-2P78367 333 aa8.55□□□□□ -1.04
GRAMD1A-208ENST00000598362 ARHGAP1Q07960 439 aa8.55□□□□□ -1.04
GRAMD1A-208ENST00000598362 FAAP100Q0VG06 881 aa8.55□□□□□ -1.04
GRAMD1A-208ENST00000598362 ADGRE1Q14246 886 aa8.55□□□□□ -1.04
GRAMD1A-208ENST00000598362 FSCN1Q16658 493 aaKnown RBP8.55□□□□□ -1.04
GRAMD1A-208ENST00000598362 INF2Q27J81 1249 aa8.55□□□□□ -1.04
GRAMD1A-208ENST00000598362 CEP55Q53EZ4 464 aa8.55□□□□□ -1.04
GRAMD1A-208ENST00000598362 RASIP1Q5U651 963 aa8.55□□□□□ -1.04
GRAMD1A-208ENST00000598362 KCNV1Q6PIU1 500 aa8.55□□□□□ -1.04
GRAMD1A-208ENST00000598362 NEK8Q86SG6 692 aa8.55□□□□□ -1.04
GRAMD1A-208ENST00000598362 TMEM199Q8N511 208 aa8.55□□□□□ -1.04
GRAMD1A-208ENST00000598362 KLHDC9Q8NEP7 349 aa8.55□□□□□ -1.04
GRAMD1A-208ENST00000598362 CYP2W1Q8TAV3 490 aa8.55□□□□□ -1.04
GRAMD1A-208ENST00000598362 HERVK_113Q902F9 699 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms