RNA–Protein interactions for RNA: ENST00000598309.1

USHBP1-208, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-208ENST00000598309 C6orf50Q9HD87 102 aa19.06■□□□□ 0.64
USHBP1-208ENST00000598309 GNA11P29992 359 aa19.05■□□□□ 0.64
USHBP1-208ENST00000598309 SMAD3P84022 425 aaKnown RBP19.05■□□□□ 0.64
USHBP1-208ENST00000598309 TMEM240Q5SV17 173 aa19.05■□□□□ 0.64
USHBP1-208ENST00000598309 GDF6Q6KF10 455 aaPredicted RBP19.05■□□□□ 0.64
USHBP1-208ENST00000598309 C16orf59Q7L2K0 433 aa19.05■□□□□ 0.64
USHBP1-208ENST00000598309 TRIM22Q8IYM9 498 aa19.05■□□□□ 0.64
USHBP1-208ENST00000598309 CCDC155Q8N6L0 562 aa19.05■□□□□ 0.64
USHBP1-208ENST00000598309 CAGE1Q8TC20 777 aa19.05■□□□□ 0.64
USHBP1-208ENST00000598309 PPP1R13LQ8WUF5 828 aa19.05■□□□□ 0.64
USHBP1-208ENST00000598309 CTAGE1Q96RT6 745 aa19.05■□□□□ 0.64
USHBP1-208ENST00000598309 ALG1Q9BT22 464 aa19.05■□□□□ 0.64
USHBP1-208ENST00000598309 BCAS3Q9H6U6 928 aa19.05■□□□□ 0.64
USHBP1-208ENST00000598309 HDAC6Q9UBN7 1215 aa19.05■□□□□ 0.64
USHBP1-208ENST00000598309 MYH7BA7E2Y1 1941 aa19.04■□□□□ 0.64
USHBP1-208ENST00000598309 PFKMP08237 780 aa19.04■□□□□ 0.64
USHBP1-208ENST00000598309 RFC2P35250 354 aa19.04■□□□□ 0.64
USHBP1-208ENST00000598309 CCL23P55773 120 aa19.04■□□□□ 0.64
USHBP1-208ENST00000598309 RASIP1Q5U651 963 aa19.04■□□□□ 0.64
USHBP1-208ENST00000598309 FAM109BQ6ICB4 259 aaPredicted RBP19.04■□□□□ 0.64
USHBP1-208ENST00000598309 CPLX2Q6PUV4 134 aaKnown RBP19.04■□□□□ 0.64
USHBP1-208ENST00000598309 RPUSD2Q8IZ73 545 aaKnown RBP19.04■□□□□ 0.64
USHBP1-208ENST00000598309 REXO1Q8N1G1 1221 aaKnown RBP19.04■□□□□ 0.64
USHBP1-208ENST00000598309 PGBD1Q96JS3 809 aa19.04■□□□□ 0.64
USHBP1-208ENST00000598309 MXRA8Q9BRK3 442 aa19.04■□□□□ 0.64
USHBP1-208ENST00000598309 SH3GLB2Q9NR46 395 aa19.04■□□□□ 0.64
USHBP1-208ENST00000598309 TMEM260Q9NX78 707 aa19.04■□□□□ 0.64
USHBP1-208ENST00000598309 H3BRB1 525 aa19.03■□□□□ 0.64
USHBP1-208ENST00000598309 CPLX1O14810 134 aa19.03■□□□□ 0.64
USHBP1-208ENST00000598309 ATP9AO75110 1047 aa19.03■□□□□ 0.64
USHBP1-208ENST00000598309 RBL2Q08999 1139 aa19.03■□□□□ 0.64
USHBP1-208ENST00000598309 CEP55Q53EZ4 464 aa19.03■□□□□ 0.64
USHBP1-208ENST00000598309 ZNF365Q70YC5 407 aa19.03■□□□□ 0.64
USHBP1-208ENST00000598309 FAM177A1Q8N128 213 aaPredicted RBP19.03■□□□□ 0.64
USHBP1-208ENST00000598309 RETREG2Q8NC44 543 aa19.03■□□□□ 0.64
USHBP1-208ENST00000598309 BICD2Q8TD16 824 aa19.03■□□□□ 0.64
USHBP1-208ENST00000598309 HERVK_113Q902F9 699 aa19.03■□□□□ 0.64
USHBP1-208ENST00000598309 MTIF3Q9H2K0 278 aaKnown RBP19.03■□□□□ 0.64
USHBP1-208ENST00000598309 TUT1Q9H6E5 874 aaKnown RBP19.03■□□□□ 0.64
USHBP1-208ENST00000598309 KCNH7Q9NS40 1196 aa19.03■□□□□ 0.64
USHBP1-208ENST00000598309 ZNF215Q9UL58 517 aaPredicted RBP19.03■□□□□ 0.64
USHBP1-208ENST00000598309 DEXIO95424 95 aa19.02■□□□□ 0.64
USHBP1-208ENST00000598309 ACRP10323 421 aa19.02■□□□□ 0.64
USHBP1-208ENST00000598309 HOXC8P31273 242 aa19.02■□□□□ 0.64
USHBP1-208ENST00000598309 ARHGAP4P98171 946 aa19.02■□□□□ 0.64
USHBP1-208ENST00000598309 SSRP1Q08945 709 aaKnown RBP19.02■□□□□ 0.64
USHBP1-208ENST00000598309 ANKRD1Q15327 319 aa19.02■□□□□ 0.64
USHBP1-208ENST00000598309 JAKMIP3Q5VZ66 844 aa19.02■□□□□ 0.64
USHBP1-208ENST00000598309 NIPA1Q7RTP0 329 aa19.02■□□□□ 0.64
USHBP1-208ENST00000598309 AFAP1L1Q8TED9 768 aa19.02■□□□□ 0.64
USHBP1-208ENST00000598309 CRYGNQ8WXF5 182 aa19.02■□□□□ 0.64
USHBP1-208ENST00000598309 SCLYQ96I15 445 aa19.02■□□□□ 0.64
USHBP1-208ENST00000598309 SZT2Q5T011 3432 aa19.02■□□□□ 0.64
USHBP1-208ENST00000598309 NFASCO94856 1347 aa19.01■□□□□ 0.63
USHBP1-208ENST00000598309 CDKL5O76039 1030 aa19.01■□□□□ 0.63
USHBP1-208ENST00000598309 FGBP02675 491 aa19.01■□□□□ 0.63
USHBP1-208ENST00000598309 CYP3A4P08684 503 aa19.01■□□□□ 0.63
USHBP1-208ENST00000598309 IQCF3P0C7M6 154 aa19.01■□□□□ 0.63
USHBP1-208ENST00000598309 PTK7Q13308 1070 aa19.01■□□□□ 0.63
USHBP1-208ENST00000598309 DEFB123Q8N688 67 aa19.01■□□□□ 0.63
USHBP1-208ENST00000598309 DHX38Q92620 1227 aaKnown RBP19.01■□□□□ 0.63
USHBP1-208ENST00000598309 LARP6Q9BRS8 491 aaKnown RBP19.01■□□□□ 0.63
USHBP1-208ENST00000598309 JPH1Q9HDC5 661 aaPredicted RBP19.01■□□□□ 0.63
USHBP1-208ENST00000598309 TANC1Q9C0D5 1861 aa19.01■□□□□ 0.63
USHBP1-208ENST00000598309 HSFX4A0A1B0GTS1 333 aaPredicted RBP19■□□□□ 0.63
USHBP1-208ENST00000598309 HSFX3A0A1B0GWH4 333 aaPredicted RBP19■□□□□ 0.63
USHBP1-208ENST00000598309 MEIS1O00470 390 aa19■□□□□ 0.63
USHBP1-208ENST00000598309 PFKFB2O60825 505 aa19■□□□□ 0.63
USHBP1-208ENST00000598309 PPFIA3O75145 1194 aa19■□□□□ 0.63
USHBP1-208ENST00000598309 PARNO95453 639 aaKnown RBP19■□□□□ 0.63
USHBP1-208ENST00000598309 TCF7P36402 384 aaPredicted RBP19■□□□□ 0.63
USHBP1-208ENST00000598309 SP4Q02446 784 aa19■□□□□ 0.63
USHBP1-208ENST00000598309 STK3Q13188 491 aa19■□□□□ 0.63
USHBP1-208ENST00000598309 CYP2W1Q8TAV3 490 aa19■□□□□ 0.63
USHBP1-208ENST00000598309 SEPT1Q8WYJ6 367 aa19■□□□□ 0.63
USHBP1-208ENST00000598309 VWCEQ96DN2 955 aa19■□□□□ 0.63
USHBP1-208ENST00000598309 SLKQ9H2G2 1235 aaPredicted RBP19■□□□□ 0.63
USHBP1-208ENST00000598309 VPS54Q9P1Q0 977 aa19■□□□□ 0.63
USHBP1-208ENST00000598309 TPCN1Q9ULQ1 816 aa19■□□□□ 0.63
USHBP1-208ENST00000598309 TELO2Q9Y4R8 837 aa19■□□□□ 0.63
USHBP1-208ENST00000598309 TMEM265A0A087WTH1 108 aa18.99■□□□□ 0.63
USHBP1-208ENST00000598309 C17orf102A2RUQ5 167 aa18.99■□□□□ 0.63
USHBP1-208ENST00000598309 SMIM10L2AP0DMW4 78 aa18.99■□□□□ 0.63
USHBP1-208ENST00000598309 SMIM10L2BP0DMW5 78 aa18.99■□□□□ 0.63
USHBP1-208ENST00000598309 SELPP16109 830 aa18.99■□□□□ 0.63
USHBP1-208ENST00000598309 ZNF76P36508 570 aa18.99■□□□□ 0.63
USHBP1-208ENST00000598309 SCRN1Q12765 414 aa18.99■□□□□ 0.63
USHBP1-208ENST00000598309 ZNF697Q5TEC3 545 aa18.99■□□□□ 0.63
USHBP1-208ENST00000598309 TRIM50Q86XT4 487 aa18.99■□□□□ 0.63
USHBP1-208ENST00000598309 SDF4Q9BRK5 362 aa18.99■□□□□ 0.63
USHBP1-208ENST00000598309 AGO4Q9HCK5 861 aaKnown RBP18.99■□□□□ 0.63
USHBP1-208ENST00000598309 PKD2L1Q9P0L9 805 aa18.99■□□□□ 0.63
USHBP1-208ENST00000598309 SLC9A2Q9UBY0 812 aa18.99■□□□□ 0.63
USHBP1-208ENST00000598309 DOCK5Q9H7D0 1870 aa18.99■□□□□ 0.63
USHBP1-208ENST00000598309 EMSYQ7Z589 1322 aa18.99■□□□□ 0.63
USHBP1-208ENST00000598309 STK36Q9NRP7 1315 aa18.99■□□□□ 0.63
USHBP1-208ENST00000598309 GSTTP1A0A1W2PQM5 241 aa18.98■□□□□ 0.63
USHBP1-208ENST00000598309 FAM86B1E9PN63 330 aa18.98■□□□□ 0.63
USHBP1-208ENST00000598309 FAM86B2P0C5J1 330 aa18.98■□□□□ 0.63
USHBP1-208ENST00000598309 ARP10275 920 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms