RNA–Protein interactions for RNA: ENST00000597811.5

XRCC1-206, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 5

Gene XRCC1, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-206ENST00000597811 SP2Q02086 613 aa17.64■□□□□ 0.41
XRCC1-206ENST00000597811 PTPN11Q06124 597 aaPredicted RBP17.64■□□□□ 0.41
XRCC1-206ENST00000597811 LAMC2Q13753 1193 aa17.64■□□□□ 0.41
XRCC1-206ENST00000597811 DGKDQ16760 1214 aa17.64■□□□□ 0.41
XRCC1-206ENST00000597811 ME3Q16798 604 aa17.64■□□□□ 0.41
XRCC1-206ENST00000597811 MYSM1Q5VVJ2 828 aa17.64■□□□□ 0.41
XRCC1-206ENST00000597811 JAKMIP3Q5VZ66 844 aa17.64■□□□□ 0.41
XRCC1-206ENST00000597811 KCNV1Q6PIU1 500 aa17.64■□□□□ 0.41
XRCC1-206ENST00000597811 NLRX1Q86UT6 975 aa17.64■□□□□ 0.41
XRCC1-206ENST00000597811 DHX37Q8IY37 1157 aaKnown RBP17.64■□□□□ 0.41
XRCC1-206ENST00000597811 PPTC7Q8NI37 304 aa17.64■□□□□ 0.41
XRCC1-206ENST00000597811 VWCEQ96DN2 955 aa17.64■□□□□ 0.41
XRCC1-206ENST00000597811 SEMA6BQ9H3T3 888 aa17.64■□□□□ 0.41
XRCC1-206ENST00000597811 TMEM260Q9NX78 707 aa17.64■□□□□ 0.41
XRCC1-206ENST00000597811 DTNBO60941 627 aa17.63■□□□□ 0.41
XRCC1-206ENST00000597811 STAM2O75886 525 aa17.63■□□□□ 0.41
XRCC1-206ENST00000597811 GGPS1O95749 300 aa17.63■□□□□ 0.41
XRCC1-206ENST00000597811 FOSP01100 380 aaPredicted RBP17.63■□□□□ 0.41
XRCC1-206ENST00000597811 ZNF286BP0CG31 522 aa17.63■□□□□ 0.41
XRCC1-206ENST00000597811 XBP1P17861 261 aa17.63■□□□□ 0.41
XRCC1-206ENST00000597811 UBA1P22314 1058 aaKnown RBP17.63■□□□□ 0.41
XRCC1-206ENST00000597811 ZNF76P36508 570 aa17.63■□□□□ 0.41
XRCC1-206ENST00000597811 RABEP1Q15276 862 aa17.63■□□□□ 0.41
XRCC1-206ENST00000597811 CELF3Q5SZQ8 465 aaKnown RBP17.63■□□□□ 0.41
XRCC1-206ENST00000597811 PCNX4Q63HM2 1172 aa17.63■□□□□ 0.41
XRCC1-206ENST00000597811 BICD2Q8TD16 824 aa17.63■□□□□ 0.41
XRCC1-206ENST00000597811 HERVK_113Q902F9 699 aa17.63■□□□□ 0.41
XRCC1-206ENST00000597811 ANO3Q9BYT9 981 aa17.63■□□□□ 0.41
XRCC1-206ENST00000597811 CXXC1Q9P0U4 656 aaPredicted RBP17.63■□□□□ 0.41
XRCC1-206ENST00000597811 LIMCH1Q9UPQ0 1083 aa17.63■□□□□ 0.41
XRCC1-206ENST00000597811 VCANP13611 3396 aa17.63■□□□□ 0.41
XRCC1-206ENST00000597811 GRXCR1A8MXD5 290 aa17.62■□□□□ 0.41
XRCC1-206ENST00000597811 ST18O60284 1047 aa17.62■□□□□ 0.41
XRCC1-206ENST00000597811 LARGE1O95461 756 aa17.62■□□□□ 0.41
XRCC1-206ENST00000597811 FGBP02675 491 aa17.62■□□□□ 0.41
XRCC1-206ENST00000597811 HOXD8P13378 290 aaPredicted RBP17.62■□□□□ 0.41
XRCC1-206ENST00000597811 DNAJB2P25686 324 aa17.62■□□□□ 0.41
XRCC1-206ENST00000597811 AP3B2Q13367 1082 aa17.62■□□□□ 0.41
XRCC1-206ENST00000597811 HSDL1Q3SXM5 330 aa17.62■□□□□ 0.41
XRCC1-206ENST00000597811 GDF6Q6KF10 455 aaPredicted RBP17.62■□□□□ 0.41
XRCC1-206ENST00000597811 XRRA1Q6P2D8 792 aa17.62■□□□□ 0.41
XRCC1-206ENST00000597811 OTOP2Q7RTS6 562 aa17.62■□□□□ 0.41
XRCC1-206ENST00000597811 SESTD1Q86VW0 696 aa17.62■□□□□ 0.41
XRCC1-206ENST00000597811 REXO1Q8N1G1 1221 aaKnown RBP17.62■□□□□ 0.41
XRCC1-206ENST00000597811 GTF3C6Q969F1 213 aa17.62■□□□□ 0.41
XRCC1-206ENST00000597811 CTAGE1Q96RT6 745 aa17.62■□□□□ 0.41
XRCC1-206ENST00000597811 CDX2Q99626 313 aaPredicted RBP17.62■□□□□ 0.41
XRCC1-206ENST00000597811 ZMYND12Q9H0C1 365 aa17.62■□□□□ 0.41
XRCC1-206ENST00000597811 BCAS3Q9H6U6 928 aa17.62■□□□□ 0.41
XRCC1-206ENST00000597811 MLXIPQ9HAP2 919 aa17.62■□□□□ 0.41
XRCC1-206ENST00000597811 ORC3Q9UBD5 711 aaPredicted RBP17.62■□□□□ 0.41
XRCC1-206ENST00000597811 PTPRSQ13332 1948 aa17.61■□□□□ 0.41
XRCC1-206ENST00000597811 KAT6AQ92794 2004 aa17.61■□□□□ 0.41
XRCC1-206ENST00000597811 ESYT2A0FGR8 921 aa17.61■□□□□ 0.41
XRCC1-206ENST00000597811 F2P00734 622 aa17.61■□□□□ 0.41
XRCC1-206ENST00000597811 TGFB3P10600 412 aa17.61■□□□□ 0.41
XRCC1-206ENST00000597811 PSEN2P49810 448 aa17.61■□□□□ 0.41
XRCC1-206ENST00000597811 SEMA3FQ13275 785 aa17.61■□□□□ 0.41
XRCC1-206ENST00000597811 PTGISQ16647 500 aa17.61■□□□□ 0.41
XRCC1-206ENST00000597811 WASF1Q92558 559 aa17.61■□□□□ 0.41
XRCC1-206ENST00000597811 SPATA33Q96N06 139 aa17.61■□□□□ 0.41
XRCC1-206ENST00000597811 INPP4AQ96PE3 977 aaPredicted RBP17.61■□□□□ 0.41
XRCC1-206ENST00000597811 KIF2CQ99661 725 aa17.61■□□□□ 0.41
XRCC1-206ENST00000597811 SH3GLB2Q9NR46 395 aa17.61■□□□□ 0.41
XRCC1-206ENST00000597811 NOD1Q9Y239 953 aa17.61■□□□□ 0.41
XRCC1-206ENST00000597811 CUL9Q8IWT3 2517 aa17.6■□□□□ 0.41
XRCC1-206ENST00000597811 TMEM265A0A087WTH1 108 aa17.6■□□□□ 0.41
XRCC1-206ENST00000597811 HAS3O00219 553 aa17.6■□□□□ 0.41
XRCC1-206ENST00000597811 PITPNM1O00562 1244 aa17.6■□□□□ 0.41
XRCC1-206ENST00000597811 FIBPO43427 364 aa17.6■□□□□ 0.41
XRCC1-206ENST00000597811 ICAM3P32942 547 aa17.6■□□□□ 0.41
XRCC1-206ENST00000597811 PBX2P40425 430 aa17.6■□□□□ 0.41
XRCC1-206ENST00000597811 MFSD10Q14728 455 aa17.6■□□□□ 0.41
XRCC1-206ENST00000597811 MCTP2Q6DN12 878 aa17.6■□□□□ 0.41
XRCC1-206ENST00000597811 TEX2Q8IWB9 1127 aa17.6■□□□□ 0.41
XRCC1-206ENST00000597811 CCDC83Q8IWF9 413 aa17.6■□□□□ 0.41
XRCC1-206ENST00000597811 RPUSD2Q8IZ73 545 aaKnown RBP17.6■□□□□ 0.41
XRCC1-206ENST00000597811 ZSCAN31Q96LW9 406 aaPredicted RBP17.6■□□□□ 0.41
XRCC1-206ENST00000597811 AIFM3Q96NN9 605 aa17.6■□□□□ 0.41
XRCC1-206ENST00000597811 ALG1Q9BT22 464 aa17.6■□□□□ 0.41
XRCC1-206ENST00000597811 KATNAL1Q9BW62 490 aa17.6■□□□□ 0.41
XRCC1-206ENST00000597811 PBX4Q9BYU1 374 aa17.6■□□□□ 0.41
XRCC1-206ENST00000597811 PKD2L1Q9P0L9 805 aa17.6■□□□□ 0.41
XRCC1-206ENST00000597811 HDAC6Q9UBN7 1215 aa17.6■□□□□ 0.41
XRCC1-206ENST00000597811 GTF2IRD1Q9UHL9 959 aa17.6■□□□□ 0.41
XRCC1-206ENST00000597811 TRANK1O15050 2925 aa17.59■□□□□ 0.41
XRCC1-206ENST00000597811 NOP56O00567 594 aaKnown RBP17.59■□□□□ 0.41
XRCC1-206ENST00000597811 PPFIA4O75335 1185 aa17.59■□□□□ 0.41
XRCC1-206ENST00000597811 IQCF3P0C7M6 154 aa17.59■□□□□ 0.41
XRCC1-206ENST00000597811 FOSBP53539 338 aa17.59■□□□□ 0.41
XRCC1-206ENST00000597811 SP4Q02446 784 aa17.59■□□□□ 0.41
XRCC1-206ENST00000597811 MTMR1Q13613 665 aa17.59■□□□□ 0.41
XRCC1-206ENST00000597811 NEDD9Q14511 834 aa17.59■□□□□ 0.41
XRCC1-206ENST00000597811 KIAA0753Q2KHM9 967 aa17.59■□□□□ 0.41
XRCC1-206ENST00000597811 DEFB128Q7Z7B8 93 aa17.59■□□□□ 0.41
XRCC1-206ENST00000597811 C7orf31Q8N865 590 aa17.59■□□□□ 0.41
XRCC1-206ENST00000597811 RASGRP4Q8TDF6 673 aa17.59■□□□□ 0.41
XRCC1-206ENST00000597811 TIFAQ96CG3 184 aa17.59■□□□□ 0.41
XRCC1-206ENST00000597811 CDHR1Q96JP9 859 aa17.59■□□□□ 0.41
XRCC1-206ENST00000597811 TBC1D32Q96NH3 1257 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms