RNA–Protein interactions for RNA: ENST00000597740.1

CAPN12-208, Transcript of calpain 12, humanhuman

TSL 4

Gene CAPN12, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-208ENST00000597740 PTPDC1A2A3K4 754 aa19.01■□□□□ 0.63
CAPN12-208ENST00000597740 CALML3P27482 149 aa19.01■□□□□ 0.63
CAPN12-208ENST00000597740 PTPN11Q06124 597 aaPredicted RBP19.01■□□□□ 0.63
CAPN12-208ENST00000597740 CMTR1Q8N1G2 835 aaKnown RBP19.01■□□□□ 0.63
CAPN12-208ENST00000597740 COPS5Q92905 334 aa19.01■□□□□ 0.63
CAPN12-208ENST00000597740 LLPHQ9BRT6 129 aaKnown RBP19.01■□□□□ 0.63
CAPN12-208ENST00000597740 UBA5Q9GZZ9 404 aa19.01■□□□□ 0.63
CAPN12-208ENST00000597740 UBE2ZQ9H832 354 aaPredicted RBP19.01■□□□□ 0.63
CAPN12-208ENST00000597740 SCN10AQ9Y5Y9 1956 aa19.01■□□□□ 0.63
CAPN12-208ENST00000597740 MYH6P13533 1939 aa19■□□□□ 0.63
CAPN12-208ENST00000597740 A6NJR5 290 aa19■□□□□ 0.63
CAPN12-208ENST00000597740 PRR33A8MZF0 331 aa19■□□□□ 0.63
CAPN12-208ENST00000597740 CPLX1O14810 134 aa19■□□□□ 0.63
CAPN12-208ENST00000597740 CYTH3O43739 400 aa19■□□□□ 0.63
CAPN12-208ENST00000597740 KPNA6O60684 536 aa19■□□□□ 0.63
CAPN12-208ENST00000597740 SLC16A2P36021 539 aa19■□□□□ 0.63
CAPN12-208ENST00000597740 DEFB103AP81534 67 aa19■□□□□ 0.63
CAPN12-208ENST00000597740 PTGISQ16647 500 aa19■□□□□ 0.63
CAPN12-208ENST00000597740 CPLX2Q6PUV4 134 aaKnown RBP19■□□□□ 0.63
CAPN12-208ENST00000597740 SLC30A10Q6XR72 485 aa19■□□□□ 0.63
CAPN12-208ENST00000597740 GJD3Q8N144 294 aa19■□□□□ 0.63
CAPN12-208ENST00000597740 NSUN7Q8NE18 718 aaKnown RBP19■□□□□ 0.63
CAPN12-208ENST00000597740 INTS4Q96HW7 963 aaKnown RBP19■□□□□ 0.63
CAPN12-208ENST00000597740 UIMC1Q96RL1 719 aa19■□□□□ 0.63
CAPN12-208ENST00000597740 SPZ1Q9BXG8 430 aa19■□□□□ 0.63
CAPN12-208ENST00000597740 RANBP17Q9H2T7 1088 aaKnown RBP19■□□□□ 0.63
CAPN12-208ENST00000597740 CPVLQ9H3G5 476 aa19■□□□□ 0.63
CAPN12-208ENST00000597740 RIOX1Q9H6W3 641 aa19■□□□□ 0.63
CAPN12-208ENST00000597740 SUGCTQ9HAC7 445 aa19■□□□□ 0.63
CAPN12-208ENST00000597740 LOC102724159A0A0B4J2E5 919 aa18.99■□□□□ 0.63
CAPN12-208ENST00000597740 NKRFO15226 690 aaKnown RBP eCLIP18.99■□□□□ 0.63
CAPN12-208ENST00000597740 CDKL5O76039 1030 aa18.99■□□□□ 0.63
CAPN12-208ENST00000597740 KCNA5P22460 613 aa18.99■□□□□ 0.63
CAPN12-208ENST00000597740 SSTR3P32745 418 aaPredicted RBP18.99■□□□□ 0.63
CAPN12-208ENST00000597740 PDE4DQ08499 809 aa18.99■□□□□ 0.63
CAPN12-208ENST00000597740 PWP2Q15269 919 aaKnown RBP18.99■□□□□ 0.63
CAPN12-208ENST00000597740 SYDE2Q5VT97 1194 aa18.99■□□□□ 0.63
CAPN12-208ENST00000597740 FAM178BQ8IXR5 827 aa18.99■□□□□ 0.63
CAPN12-208ENST00000597740 CCDC155Q8N6L0 562 aa18.99■□□□□ 0.63
CAPN12-208ENST00000597740 TET1Q8NFU7 2136 aa18.99■□□□□ 0.63
CAPN12-208ENST00000597740 SMARCC2Q8TAQ2 1214 aa18.99■□□□□ 0.63
CAPN12-208ENST00000597740 PTPRSQ13332 1948 aa18.99■□□□□ 0.63
CAPN12-208ENST00000597740 CNTNAP5Q8WYK1 1306 aa18.99■□□□□ 0.63
CAPN12-208ENST00000597740 BRWD1Q9NSI6 2320 aa18.99■□□□□ 0.63
CAPN12-208ENST00000597740 LEXMQ3ZCV2 418 aa18.98■□□□□ 0.63
CAPN12-208ENST00000597740 ADGRF4Q8IZF3 695 aa18.98■□□□□ 0.63
CAPN12-208ENST00000597740 CCDC82Q8N4S0 544 aa18.98■□□□□ 0.63
CAPN12-208ENST00000597740 CAGE1Q8TC20 777 aa18.98■□□□□ 0.63
CAPN12-208ENST00000597740 AFAP1L1Q8TED9 768 aa18.98■□□□□ 0.63
CAPN12-208ENST00000597740 SCFD2Q8WU76 684 aa18.98■□□□□ 0.63
CAPN12-208ENST00000597740 PHKBQ93100 1093 aa18.98■□□□□ 0.63
CAPN12-208ENST00000597740 MTMR8Q96EF0 704 aa18.98■□□□□ 0.63
CAPN12-208ENST00000597740 JMJD4Q9H9V9 463 aa18.98■□□□□ 0.63
CAPN12-208ENST00000597740 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.98■□□□□ 0.63
CAPN12-208ENST00000597740 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.97■□□□□ 0.63
CAPN12-208ENST00000597740 PRPF3O43395 683 aaKnown RBP18.97■□□□□ 0.63
CAPN12-208ENST00000597740 JAK2O60674 1132 aa18.97■□□□□ 0.63
CAPN12-208ENST00000597740 DTNBO60941 627 aa18.97■□□□□ 0.63
CAPN12-208ENST00000597740 TXNP10599 105 aaKnown RBP18.97■□□□□ 0.63
CAPN12-208ENST00000597740 IL9P15248 144 aa18.97■□□□□ 0.63
CAPN12-208ENST00000597740 GPNMBQ14956 572 aa18.97■□□□□ 0.63
CAPN12-208ENST00000597740 CNKSR3Q6P9H4 555 aa18.97■□□□□ 0.63
CAPN12-208ENST00000597740 RNF207Q6ZRF8 634 aa18.97■□□□□ 0.63
CAPN12-208ENST00000597740 LRRC8DQ7L1W4 858 aa18.97■□□□□ 0.63
CAPN12-208ENST00000597740 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.97■□□□□ 0.63
CAPN12-208ENST00000597740 TGS1Q96RS0 853 aaKnown RBP18.97■□□□□ 0.63
CAPN12-208ENST00000597740 MPHOSPH6Q99547 160 aaKnown RBP18.97■□□□□ 0.63
CAPN12-208ENST00000597740 RNF26Q9BY78 433 aaPredicted RBP18.97■□□□□ 0.63
CAPN12-208ENST00000597740 VAT1LQ9HCJ6 419 aa18.97■□□□□ 0.63
CAPN12-208ENST00000597740 GJB5O95377 273 aa18.96■□□□□ 0.63
CAPN12-208ENST00000597740 FDPSP14324 419 aaKnown RBP18.96■□□□□ 0.63
CAPN12-208ENST00000597740 SELPP16109 830 aa18.96■□□□□ 0.63
CAPN12-208ENST00000597740 ERVK-21P61565 698 aa18.96■□□□□ 0.63
CAPN12-208ENST00000597740 SSRP1Q08945 709 aaKnown RBP18.96■□□□□ 0.63
CAPN12-208ENST00000597740 CSPP1Q1MSJ5 1256 aa18.96■□□□□ 0.63
CAPN12-208ENST00000597740 GDF6Q6KF10 455 aaPredicted RBP18.96■□□□□ 0.63
CAPN12-208ENST00000597740 FAM117BQ6P1L5 589 aa18.96■□□□□ 0.63
CAPN12-208ENST00000597740 CLEC4DQ8WXI8 215 aa18.96■□□□□ 0.63
CAPN12-208ENST00000597740 CTAGE1Q96RT6 745 aa18.96■□□□□ 0.63
CAPN12-208ENST00000597740 RAD9AQ99638 391 aa18.96■□□□□ 0.63
CAPN12-208ENST00000597740 SLC26A6Q9BXS9 759 aa18.96■□□□□ 0.63
CAPN12-208ENST00000597740 V9GY48 417 aaPredicted RBP18.96■□□□□ 0.63
CAPN12-208ENST00000597740 STK36Q9NRP7 1315 aa18.96■□□□□ 0.63
CAPN12-208ENST00000597740 LINC01553A4QN01 128 aa18.95■□□□□ 0.62
CAPN12-208ENST00000597740 RBAK-RBAKDNI3L0D1 243 aa18.95■□□□□ 0.62
CAPN12-208ENST00000597740 PPFIA3O75145 1194 aa18.95■□□□□ 0.62
CAPN12-208ENST00000597740 ARIH2O95376 493 aa18.95■□□□□ 0.62
CAPN12-208ENST00000597740 ALADP13716 330 aa18.95■□□□□ 0.62
CAPN12-208ENST00000597740 EDNRBP24530 442 aa18.95■□□□□ 0.62
CAPN12-208ENST00000597740 MRE11P49959 708 aa18.95■□□□□ 0.62
CAPN12-208ENST00000597740 HMGN5P82970 282 aaKnown RBP18.95■□□□□ 0.62
CAPN12-208ENST00000597740 TCTN1Q2MV58 587 aa18.95■□□□□ 0.62
CAPN12-208ENST00000597740 PTCRAQ6ISU1 281 aaPredicted RBP18.95■□□□□ 0.62
CAPN12-208ENST00000597740 TRIM22Q8IYM9 498 aa18.95■□□□□ 0.62
CAPN12-208ENST00000597740 DHX38Q92620 1227 aaKnown RBP18.95■□□□□ 0.62
CAPN12-208ENST00000597740 PIGSQ96S52 555 aa18.95■□□□□ 0.62
CAPN12-208ENST00000597740 SMC3Q9UQE7 1217 aa18.95■□□□□ 0.62
CAPN12-208ENST00000597740 NBNO60934 754 aa18.94■□□□□ 0.62
CAPN12-208ENST00000597740 RPS6P62753 249 aaKnown RBP18.94■□□□□ 0.62
CAPN12-208ENST00000597740 PKN1Q16512 942 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms