RNA–Protein interactions for RNA: ENST00000597636.5

IRF3-219, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 2,874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-219ENST00000597636 AMIGO3Q86WK7 504 aa17.07■□□□□ 0.32
IRF3-219ENST00000597636 SYN2Q92777 582 aaPredicted RBP17.07■□□□□ 0.32
IRF3-219ENST00000597636 MIEF2Q96C03 454 aa17.07■□□□□ 0.32
IRF3-219ENST00000597636 NLRC4Q9NPP4 1024 aa17.07■□□□□ 0.32
IRF3-219ENST00000597636 HAUS2Q9NVX0 235 aa17.07■□□□□ 0.32
IRF3-219ENST00000597636 TMOD1P28289 359 aa17.06■□□□□ 0.32
IRF3-219ENST00000597636 CHRNDQ07001 517 aa17.06■□□□□ 0.32
IRF3-219ENST00000597636 LACTB2Q53H82 288 aaPredicted RBP17.06■□□□□ 0.32
IRF3-219ENST00000597636 STAG2Q8N3U4 1231 aa17.06■□□□□ 0.32
IRF3-219ENST00000597636 GUF1Q8N442 669 aaKnown RBP17.06■□□□□ 0.32
IRF3-219ENST00000597636 TPX2Q9ULW0 747 aaKnown RBP17.06■□□□□ 0.32
IRF3-219ENST00000597636 ZNF804BA4D1E1 1349 aa17.06■□□□□ 0.32
IRF3-219ENST00000597636 TSPY2A6NKD2 308 aa17.06■□□□□ 0.32
IRF3-219ENST00000597636 SCP2P22307 547 aa17.06■□□□□ 0.32
IRF3-219ENST00000597636 CTNNA1P35221 906 aaKnown RBP17.06■□□□□ 0.32
IRF3-219ENST00000597636 MRPL12P52815 198 aaKnown RBP17.06■□□□□ 0.32
IRF3-219ENST00000597636 LRRC63Q05C16 580 aa17.06■□□□□ 0.32
IRF3-219ENST00000597636 SFMBT2Q5VUG0 894 aa17.06■□□□□ 0.32
IRF3-219ENST00000597636 LRRC55Q6ZSA7 311 aa17.06■□□□□ 0.32
IRF3-219ENST00000597636 CEP72Q9P209 647 aa17.06■□□□□ 0.32
IRF3-219ENST00000597636 TRIM37O94972 964 aa17.05■□□□□ 0.32
IRF3-219ENST00000597636 PAEPP09466 180 aa17.05■□□□□ 0.32
IRF3-219ENST00000597636 ERCC3P19447 782 aa17.05■□□□□ 0.32
IRF3-219ENST00000597636 SCTRP47872 440 aa17.05■□□□□ 0.32
IRF3-219ENST00000597636 PPARDQ03181 441 aa17.05■□□□□ 0.32
IRF3-219ENST00000597636 CACNA2D3Q8IZS8 1091 aa17.05■□□□□ 0.32
IRF3-219ENST00000597636 ZNF384Q8TF68 577 aa17.05■□□□□ 0.32
IRF3-219ENST00000597636 MMTAG2Q9BU76 263 aaKnown RBP17.05■□□□□ 0.32
IRF3-219ENST00000597636 RREB1Q92766 1687 aa17.05■□□□□ 0.32
IRF3-219ENST00000597636 SSBP05455 408 aaKnown RBP eCLIP17.05■□□□□ 0.32
IRF3-219ENST00000597636 PPP2R2AP63151 447 aa17.05■□□□□ 0.32
IRF3-219ENST00000597636 XRCC4Q13426 336 aa17.05■□□□□ 0.32
IRF3-219ENST00000597636 BYSLQ13895 437 aaKnown RBP17.05■□□□□ 0.32
IRF3-219ENST00000597636 ODF2Q5BJF6 829 aa17.05■□□□□ 0.32
IRF3-219ENST00000597636 FAM83BQ5T0W9 1011 aa17.05■□□□□ 0.32
IRF3-219ENST00000597636 AGBL2Q5U5Z8 902 aa17.05■□□□□ 0.32
IRF3-219ENST00000597636 UNC13DQ70J99 1090 aa17.05■□□□□ 0.32
IRF3-219ENST00000597636 SV2BQ7L1I2 683 aa17.05■□□□□ 0.32
IRF3-219ENST00000597636 ARMC9Q7Z3E5 817 aa17.05■□□□□ 0.32
IRF3-219ENST00000597636 RAPGEF5Q92565 580 aa17.05■□□□□ 0.32
IRF3-219ENST00000597636 TANGO6Q9C0B7 1094 aa17.05■□□□□ 0.32
IRF3-219ENST00000597636 ATP6V0A2Q9Y487 856 aa17.05■□□□□ 0.32
IRF3-219ENST00000597636 CICQ96RK0 1608 aaPredicted RBP17.04■□□□□ 0.32
IRF3-219ENST00000597636 PVALEFA0A1B0GWK0 134 aa17.04■□□□□ 0.32
IRF3-219ENST00000597636 CES2O00748 559 aa17.04■□□□□ 0.32
IRF3-219ENST00000597636 EZRP15311 586 aaKnown RBP17.04■□□□□ 0.32
IRF3-219ENST00000597636 GYG1P46976 350 aa17.04■□□□□ 0.32
IRF3-219ENST00000597636 SLC18A3Q16572 532 aa17.04■□□□□ 0.32
IRF3-219ENST00000597636 KIAA0753Q2KHM9 967 aa17.04■□□□□ 0.32
IRF3-219ENST00000597636 SUSD4Q5VX71 490 aa17.04■□□□□ 0.32
IRF3-219ENST00000597636 HEATR3Q7Z4Q2 680 aa17.04■□□□□ 0.32
IRF3-219ENST00000597636 TAX1BP1Q86VP1 789 aa17.04■□□□□ 0.32
IRF3-219ENST00000597636 TBC1D5Q92609 795 aa17.04■□□□□ 0.32
IRF3-219ENST00000597636 TAF4BQ92750 862 aa17.04■□□□□ 0.32
IRF3-219ENST00000597636 BCCIPQ9P287 314 aaKnown RBP eCLIP17.04■□□□□ 0.32
IRF3-219ENST00000597636 CNOT8Q9UFF9 292 aaKnown RBP17.04■□□□□ 0.32
IRF3-219ENST00000597636 ANKRD36CQ5JPF3 1778 aa17.04■□□□□ 0.32
IRF3-219ENST00000597636 MYMKA6NI61 221 aa17.04■□□□□ 0.32
IRF3-219ENST00000597636 NOL4O94818 638 aa17.04■□□□□ 0.32
IRF3-219ENST00000597636 GCFC2P16383 781 aaKnown RBP17.04■□□□□ 0.32
IRF3-219ENST00000597636 TECP42680 631 aa17.04■□□□□ 0.32
IRF3-219ENST00000597636 TMED8Q6PL24 325 aaPredicted RBP17.04■□□□□ 0.32
IRF3-219ENST00000597636 SCFD2Q8WU76 684 aa17.04■□□□□ 0.32
IRF3-219ENST00000597636 P3H4Q92791 437 aa17.04■□□□□ 0.32
IRF3-219ENST00000597636 TATDN2Q93075 761 aa17.04■□□□□ 0.32
IRF3-219ENST00000597636 CALML4Q96GE6 196 aa17.04■□□□□ 0.32
IRF3-219ENST00000597636 SCLT1Q96NL6 688 aa17.04■□□□□ 0.32
IRF3-219ENST00000597636 BARHL2Q9NY43 387 aa17.04■□□□□ 0.32
IRF3-219ENST00000597636 MYH14Q7Z406 1995 aaKnown RBP17.03■□□□□ 0.32
IRF3-219ENST00000597636 STXBP3O00186 592 aa17.03■□□□□ 0.32
IRF3-219ENST00000597636 CCNT1O60563 726 aaKnown RBP17.03■□□□□ 0.32
IRF3-219ENST00000597636 IBSPP21815 317 aaPredicted RBP17.03■□□□□ 0.32
IRF3-219ENST00000597636 IFFO1Q0D2I5 559 aa17.03■□□□□ 0.32
IRF3-219ENST00000597636 LETM2Q2VYF4 491 aa17.03■□□□□ 0.32
IRF3-219ENST00000597636 CCDC152Q4G0S7 254 aa17.03■□□□□ 0.32
IRF3-219ENST00000597636 PNMA1Q8ND90 353 aa17.03■□□□□ 0.32
IRF3-219ENST00000597636 ANKS1AQ92625 1134 aa17.03■□□□□ 0.32
IRF3-219ENST00000597636 DCP1AQ9NPI6 582 aaPredicted RBP17.03■□□□□ 0.32
IRF3-219ENST00000597636 SRP68Q9UHB9 627 aaKnown RBP17.03■□□□□ 0.32
IRF3-219ENST00000597636 CCNL1Q9UK58 526 aaPredicted RBP17.03■□□□□ 0.32
IRF3-219ENST00000597636 A0A087X0T9 212 aa17.03■□□□□ 0.32
IRF3-219ENST00000597636 BHMG1C9JSJ3 638 aaPredicted RBP17.03■□□□□ 0.32
IRF3-219ENST00000597636 KCNK3O14649 394 aa17.03■□□□□ 0.32
IRF3-219ENST00000597636 FAM228BP0C875 321 aa17.03■□□□□ 0.32
IRF3-219ENST00000597636 IL6STP40189 918 aaPredicted RBP17.03■□□□□ 0.32
IRF3-219ENST00000597636 GNAQP50148 359 aa17.03■□□□□ 0.32
IRF3-219ENST00000597636 RPS6KA1Q15418 735 aa17.03■□□□□ 0.32
IRF3-219ENST00000597636 SLC35G1Q2M3R5 365 aa17.03■□□□□ 0.32
IRF3-219ENST00000597636 GKAP1Q5VSY0 366 aaPredicted RBP17.03■□□□□ 0.32
IRF3-219ENST00000597636 DDX42Q86XP3 938 aaKnown RBP eCLIP17.03■□□□□ 0.32
IRF3-219ENST00000597636 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.03■□□□□ 0.32
IRF3-219ENST00000597636 BACH1O14867 736 aa17.03■□□□□ 0.32
IRF3-219ENST00000597636 CYP2D6P10635 497 aa17.03■□□□□ 0.32
IRF3-219ENST00000597636 SLC8A1P32418 973 aa17.03■□□□□ 0.32
IRF3-219ENST00000597636 PACSIN1Q9BY11 444 aa17.03■□□□□ 0.32
IRF3-219ENST00000597636 BLOC1S4Q9NUP1 217 aa17.03■□□□□ 0.32
IRF3-219ENST00000597636 NOVA2Q9UNW9 492 aaKnown RBP17.03■□□□□ 0.32
IRF3-219ENST00000597636 NIP7Q9Y221 180 aaKnown RBP eCLIP17.03■□□□□ 0.32
IRF3-219ENST00000597636 CACNA1SQ13698 1873 aa17.02■□□□□ 0.32
IRF3-219ENST00000597636 GNPATO15228 680 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms