RNA–Protein interactions for RNA: ENST00000596348.2

SCN1B-204, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 1,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-204ENST00000596348 TMX3Q96JJ7 454 aa17.08■□□□□ 0.32
SCN1B-204ENST00000596348 CDHR1Q96JP9 859 aa17.08■□□□□ 0.32
SCN1B-204ENST00000596348 MLXIPQ9HAP2 919 aa17.08■□□□□ 0.32
SCN1B-204ENST00000596348 PDLIM7Q9NR12 457 aa17.08■□□□□ 0.32
SCN1B-204ENST00000596348 XBP1P17861 261 aa17.07■□□□□ 0.32
SCN1B-204ENST00000596348 DGKDQ16760 1214 aa17.07■□□□□ 0.32
SCN1B-204ENST00000596348 NIPA1Q7RTP0 329 aa17.07■□□□□ 0.32
SCN1B-204ENST00000596348 SH3RF1Q7Z6J0 888 aa17.07■□□□□ 0.32
SCN1B-204ENST00000596348 TBCKQ8TEA7 893 aa17.07■□□□□ 0.32
SCN1B-204ENST00000596348 LTBP2Q14767 1821 aa17.07■□□□□ 0.32
SCN1B-204ENST00000596348 MAFGO15525 162 aa17.06■□□□□ 0.32
SCN1B-204ENST00000596348 CIITAP33076 1130 aa17.06■□□□□ 0.32
SCN1B-204ENST00000596348 ZNF76P36508 570 aa17.06■□□□□ 0.32
SCN1B-204ENST00000596348 SP4Q02446 784 aa17.06■□□□□ 0.32
SCN1B-204ENST00000596348 FAAP100Q0VG06 881 aa17.06■□□□□ 0.32
SCN1B-204ENST00000596348 ITGB3BPQ13352 177 aaPredicted RBP17.06■□□□□ 0.32
SCN1B-204ENST00000596348 NBPF20Q3BBV1 942 aa17.06■□□□□ 0.32
SCN1B-204ENST00000596348 PLA2G4DQ86XP0 818 aa17.06■□□□□ 0.32
SCN1B-204ENST00000596348 FAM126BQ8IXS8 530 aa17.06■□□□□ 0.32
SCN1B-204ENST00000596348 LENG9Q96B70 501 aa17.06■□□□□ 0.32
SCN1B-204ENST00000596348 TOX2Q96NM4 488 aa17.06■□□□□ 0.32
SCN1B-204ENST00000596348 UIMC1Q96RL1 719 aa17.06■□□□□ 0.32
SCN1B-204ENST00000596348 GPR20Q99678 358 aa17.06■□□□□ 0.32
SCN1B-204ENST00000596348 AGO4Q9HCK5 861 aaKnown RBP17.06■□□□□ 0.32
SCN1B-204ENST00000596348 TRIM43BA6NCK2 446 aa17.05■□□□□ 0.32
SCN1B-204ENST00000596348 FAM205CA6NFA0 338 aa17.05■□□□□ 0.32
SCN1B-204ENST00000596348 PPFIA4O75335 1185 aa17.05■□□□□ 0.32
SCN1B-204ENST00000596348 F2P00734 622 aa17.05■□□□□ 0.32
SCN1B-204ENST00000596348 NR5A1Q13285 461 aa17.05■□□□□ 0.32
SCN1B-204ENST00000596348 INF2Q27J81 1249 aa17.05■□□□□ 0.32
SCN1B-204ENST00000596348 EARS2Q5JPH6 523 aaKnown RBP17.05■□□□□ 0.32
SCN1B-204ENST00000596348 KRT40Q6A162 431 aa17.05■□□□□ 0.32
SCN1B-204ENST00000596348 KRT25Q7Z3Z0 450 aa17.05■□□□□ 0.32
SCN1B-204ENST00000596348 GIMAP8Q8ND71 665 aaPredicted RBP17.05■□□□□ 0.32
SCN1B-204ENST00000596348 TNFRSF25Q93038 417 aa17.05■□□□□ 0.32
SCN1B-204ENST00000596348 TRIM43Q96BQ3 446 aaPredicted RBP17.05■□□□□ 0.32
SCN1B-204ENST00000596348 C16orf70Q9BSU1 422 aa17.05■□□□□ 0.32
SCN1B-204ENST00000596348 NFASCO94856 1347 aa17.04■□□□□ 0.32
SCN1B-204ENST00000596348 MROH7Q68CQ1 1323 aa17.04■□□□□ 0.32
SCN1B-204ENST00000596348 DCDC2CA8MYV0 355 aa17.04■□□□□ 0.32
SCN1B-204ENST00000596348 HAS3O00219 553 aa17.04■□□□□ 0.32
SCN1B-204ENST00000596348 NOP56O00567 594 aaKnown RBP17.04■□□□□ 0.32
SCN1B-204ENST00000596348 CD4P01730 458 aa17.04■□□□□ 0.32
SCN1B-204ENST00000596348 MMP1P03956 469 aa17.04■□□□□ 0.32
SCN1B-204ENST00000596348 LGALS2P05162 132 aa17.04■□□□□ 0.32
SCN1B-204ENST00000596348 CLTBP09497 229 aa17.04■□□□□ 0.32
SCN1B-204ENST00000596348 MCM2P49736 904 aa17.04■□□□□ 0.32
SCN1B-204ENST00000596348 USP11P51784 963 aa17.04■□□□□ 0.32
SCN1B-204ENST00000596348 CHMP4BP1P59074 171 aa17.04■□□□□ 0.32
SCN1B-204ENST00000596348 HMGN5P82970 282 aaKnown RBP17.04■□□□□ 0.32
SCN1B-204ENST00000596348 GUCY1B3Q02153 619 aa17.04■□□□□ 0.32
SCN1B-204ENST00000596348 NONOQ15233 471 aaKnown RBP eCLIP17.04■□□□□ 0.32
SCN1B-204ENST00000596348 PRR16Q569H4 304 aa17.04■□□□□ 0.32
SCN1B-204ENST00000596348 TRIM50Q86XT4 487 aa17.04■□□□□ 0.32
SCN1B-204ENST00000596348 TRPV6Q9H1D0 765 aa17.04■□□□□ 0.32
SCN1B-204ENST00000596348 PRDM5Q9NQX1 630 aaPredicted RBP17.04■□□□□ 0.32
SCN1B-204ENST00000596348 TRIP12Q14669 1992 aaPredicted RBP17.04■□□□□ 0.32
SCN1B-204ENST00000596348 LAMA3Q16787 3333 aa17.03■□□□□ 0.32
SCN1B-204ENST00000596348 GSTTP1A0A1W2PQM5 241 aa17.03■□□□□ 0.32
SCN1B-204ENST00000596348 DHX15O43143 795 aaKnown RBP17.03■□□□□ 0.32
SCN1B-204ENST00000596348 B4GALT4O60513 344 aa17.03■□□□□ 0.32
SCN1B-204ENST00000596348 TDP2O95551 362 aa17.03■□□□□ 0.32
SCN1B-204ENST00000596348 ITGB8P26012 769 aa17.03■□□□□ 0.32
SCN1B-204ENST00000596348 KRT2P35908 639 aa17.03■□□□□ 0.32
SCN1B-204ENST00000596348 PSEN2P49810 448 aa17.03■□□□□ 0.32
SCN1B-204ENST00000596348 MFSD10Q14728 455 aa17.03■□□□□ 0.32
SCN1B-204ENST00000596348 NFRKBQ6P4R8 1299 aa17.03■□□□□ 0.32
SCN1B-204ENST00000596348 PIK3AP1Q6ZUJ8 805 aa17.03■□□□□ 0.32
SCN1B-204ENST00000596348 DIS3L2Q8IYB7 885 aaKnown RBP17.03■□□□□ 0.32
SCN1B-204ENST00000596348 JPH1Q9HDC5 661 aaPredicted RBP17.03■□□□□ 0.32
SCN1B-204ENST00000596348 TRMT13Q9NUP7 481 aaKnown RBP17.03■□□□□ 0.32
SCN1B-204ENST00000596348 TBX21Q9UL17 535 aa17.03■□□□□ 0.32
SCN1B-204ENST00000596348 CYP3A7-CYP3A51PA0A087WV96 503 aa17.02■□□□□ 0.32
SCN1B-204ENST00000596348 CCDC194A0A1B0GVG4 234 aa17.02■□□□□ 0.32
SCN1B-204ENST00000596348 BTBD18B2RXH4 712 aa17.02■□□□□ 0.32
SCN1B-204ENST00000596348 IPO5O00410 1097 aaKnown RBP17.02■□□□□ 0.32
SCN1B-204ENST00000596348 KIAA0355O15063 1070 aa17.02■□□□□ 0.32
SCN1B-204ENST00000596348 CCNE2O96020 404 aa17.02■□□□□ 0.32
SCN1B-204ENST00000596348 CYP3A7P24462 503 aa17.02■□□□□ 0.32
SCN1B-204ENST00000596348 TCF7P36402 384 aaPredicted RBP17.02■□□□□ 0.32
SCN1B-204ENST00000596348 MAGEA10P43363 369 aaPredicted RBP17.02■□□□□ 0.32
SCN1B-204ENST00000596348 SETQ01105 290 aaPredicted RBP17.02■□□□□ 0.32
SCN1B-204ENST00000596348 TRIM29Q14134 588 aa17.02■□□□□ 0.32
SCN1B-204ENST00000596348 KIAA0753Q2KHM9 967 aa17.02■□□□□ 0.32
SCN1B-204ENST00000596348 FAM47CQ5HY64 1035 aa17.02■□□□□ 0.32
SCN1B-204ENST00000596348 C8orf76Q96K31 380 aa17.02■□□□□ 0.32
SCN1B-204ENST00000596348 MBOAT7Q96N66 472 aa17.02■□□□□ 0.32
SCN1B-204ENST00000596348 SDF4Q9BRK5 362 aa17.02■□□□□ 0.32
SCN1B-204ENST00000596348 SEZ6LQ9BYH1 1024 aa17.02■□□□□ 0.32
SCN1B-204ENST00000596348 TMEM39AQ9NV64 488 aa17.02■□□□□ 0.32
SCN1B-204ENST00000596348 SLC9A2Q9UBY0 812 aa17.02■□□□□ 0.32
SCN1B-204ENST00000596348 DDX39AO00148 427 aaKnown RBP17.01■□□□□ 0.31
SCN1B-204ENST00000596348 MSH4O15457 936 aa17.01■□□□□ 0.31
SCN1B-204ENST00000596348 ACTR2P61160 394 aa17.01■□□□□ 0.31
SCN1B-204ENST00000596348 UTP14CQ5TAP6 766 aaKnown RBP17.01■□□□□ 0.31
SCN1B-204ENST00000596348 SEPT1Q8WYJ6 367 aa17.01■□□□□ 0.31
SCN1B-204ENST00000596348 CTAGE1Q96RT6 745 aa17.01■□□□□ 0.31
SCN1B-204ENST00000596348 PCYT2Q99447 389 aa17.01■□□□□ 0.31
SCN1B-204ENST00000596348 GDF15Q99988 308 aa17.01■□□□□ 0.31
SCN1B-204ENST00000596348 ZNF577Q9BSK1 485 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms