RNA–Protein interactions for RNA: ENST00000596161.5

CCDC61-205, Transcript of coiled-coil domain containing 61, humanhuman

TSL 4

Gene CCDC61, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-205ENST00000596161 ATP9AO75110 1047 aa22.75■■□□□ 1.23
CCDC61-205ENST00000596161 MYL3P08590 195 aa22.75■■□□□ 1.23
CCDC61-205ENST00000596161 CYP3A7P24462 503 aa22.75■■□□□ 1.23
CCDC61-205ENST00000596161 DGKDQ16760 1214 aa22.75■■□□□ 1.23
CCDC61-205ENST00000596161 LARP1BQ659C4 914 aaKnown RBP22.75■■□□□ 1.23
CCDC61-205ENST00000596161 FERMT2Q96AC1 680 aa22.75■■□□□ 1.23
CCDC61-205ENST00000596161 STARD7Q9NQZ5 370 aa22.75■■□□□ 1.23
CCDC61-205ENST00000596161 PKD2L1Q9P0L9 805 aa22.75■■□□□ 1.23
CCDC61-205ENST00000596161 ELP1O95163 1332 aa22.75■■□□□ 1.23
CCDC61-205ENST00000596161 EDIL3O43854 480 aa22.74■■□□□ 1.23
CCDC61-205ENST00000596161 SORBS3O60504 671 aa22.74■■□□□ 1.23
CCDC61-205ENST00000596161 HSP90AA1P07900 732 aaKnown RBP22.74■■□□□ 1.23
CCDC61-205ENST00000596161 Q4G0T1 1027 aa22.74■■□□□ 1.23
CCDC61-205ENST00000596161 CXCL17Q6UXB2 119 aa22.74■■□□□ 1.23
CCDC61-205ENST00000596161 VTI1AQ96AJ9 217 aa22.74■■□□□ 1.23
CCDC61-205ENST00000596161 ZNF577Q9BSK1 485 aa22.74■■□□□ 1.23
CCDC61-205ENST00000596161 MTG1Q9BT17 334 aaPredicted RBP22.74■■□□□ 1.23
CCDC61-205ENST00000596161 TCEAL9Q9UHQ7 104 aa22.74■■□□□ 1.23
CCDC61-205ENST00000596161 IPO5O00410 1097 aaKnown RBP22.73■■□□□ 1.23
CCDC61-205ENST00000596161 PPFIA4O75335 1185 aa22.73■■□□□ 1.23
CCDC61-205ENST00000596161 TDP2O95551 362 aa22.73■■□□□ 1.23
CCDC61-205ENST00000596161 PURAQ00577 322 aaKnown RBP22.73■■□□□ 1.23
CCDC61-205ENST00000596161 MLLT1Q03111 559 aaPredicted RBP22.73■■□□□ 1.23
CCDC61-205ENST00000596161 HSDL1Q3SXM5 330 aa22.73■■□□□ 1.23
CCDC61-205ENST00000596161 EARS2Q5JPH6 523 aaKnown RBP22.73■■□□□ 1.23
CCDC61-205ENST00000596161 PPP4R3AQ6IN85 833 aa22.73■■□□□ 1.23
CCDC61-205ENST00000596161 NOSTRINQ8IVI9 506 aa22.73■■□□□ 1.23
CCDC61-205ENST00000596161 MBOAT7Q96N66 472 aa22.73■■□□□ 1.23
CCDC61-205ENST00000596161 JPH1Q9HDC5 661 aaPredicted RBP22.73■■□□□ 1.23
CCDC61-205ENST00000596161 TBC1D22BQ9NU19 505 aa22.73■■□□□ 1.23
CCDC61-205ENST00000596161 DDX25Q9UHL0 483 aaKnown RBP22.73■■□□□ 1.23
CCDC61-205ENST00000596161 FAM205CA6NFA0 338 aa22.72■■□□□ 1.23
CCDC61-205ENST00000596161 CCNT1O60563 726 aaKnown RBP22.72■■□□□ 1.23
CCDC61-205ENST00000596161 HOXD8P13378 290 aaPredicted RBP22.72■■□□□ 1.23
CCDC61-205ENST00000596161 SLC39A5Q6ZMH5 540 aa22.72■■□□□ 1.23
CCDC61-205ENST00000596161 LENG9Q96B70 501 aa22.72■■□□□ 1.23
CCDC61-205ENST00000596161 SEZ6LQ9BYH1 1024 aa22.72■■□□□ 1.23
CCDC61-205ENST00000596161 SLC9A2Q9UBY0 812 aa22.72■■□□□ 1.23
CCDC61-205ENST00000596161 A0A0U1RQG5 324 aaPredicted RBP22.71■■□□□ 1.23
CCDC61-205ENST00000596161 U2AF2P26368 475 aaKnown RBP eCLIP22.71■■□□□ 1.23
CCDC61-205ENST00000596161 ATN1P54259 1190 aaPredicted RBP22.71■■□□□ 1.23
CCDC61-205ENST00000596161 SP4Q02446 784 aa22.71■■□□□ 1.23
CCDC61-205ENST00000596161 ITGB3BPQ13352 177 aaPredicted RBP22.71■■□□□ 1.23
CCDC61-205ENST00000596161 MCTP1Q6DN14 999 aa22.71■■□□□ 1.23
CCDC61-205ENST00000596161 GPR20Q99678 358 aa22.71■■□□□ 1.23
CCDC61-205ENST00000596161 BCAS3Q9H6U6 928 aa22.71■■□□□ 1.23
CCDC61-205ENST00000596161 FOXD4L1Q9NU39 408 aa22.71■■□□□ 1.23
CCDC61-205ENST00000596161 NOL7Q9UMY1 257 aaKnown RBP22.71■■□□□ 1.23
CCDC61-205ENST00000596161 BRCA2P51587 3418 aa22.7■■□□□ 1.22
CCDC61-205ENST00000596161 C1orf53Q5VUE5 145 aa22.7■■□□□ 1.22
CCDC61-205ENST00000596161 SEPT1Q8WYJ6 367 aa22.7■■□□□ 1.22
CCDC61-205ENST00000596161 RIT2Q99578 217 aa22.7■■□□□ 1.22
CCDC61-205ENST00000596161 KATNAL1Q9BW62 490 aa22.7■■□□□ 1.22
CCDC61-205ENST00000596161 MSH4O15457 936 aa22.69■■□□□ 1.22
CCDC61-205ENST00000596161 TRAPPC10P48553 1259 aa22.69■■□□□ 1.22
CCDC61-205ENST00000596161 BECN1Q14457 450 aa22.69■■□□□ 1.22
CCDC61-205ENST00000596161 SNX17Q15036 470 aa22.69■■□□□ 1.22
CCDC61-205ENST00000596161 MROH7Q68CQ1 1323 aa22.68■■□□□ 1.22
CCDC61-205ENST00000596161 KIF28PB7ZC32 967 aa22.68■■□□□ 1.22
CCDC61-205ENST00000596161 RTP1P59025 263 aa22.68■■□□□ 1.22
CCDC61-205ENST00000596161 KRT76Q01546 638 aa22.68■■□□□ 1.22
CCDC61-205ENST00000596161 ITGA7Q13683 1181 aa22.68■■□□□ 1.22
CCDC61-205ENST00000596161 LRRC26Q2I0M4 334 aa22.68■■□□□ 1.22
CCDC61-205ENST00000596161 DPF3Q92784 378 aa22.68■■□□□ 1.22
CCDC61-205ENST00000596161 SLC5A5Q92911 643 aa22.68■■□□□ 1.22
CCDC61-205ENST00000596161 FAM20AQ96MK3 541 aa22.68■■□□□ 1.22
CCDC61-205ENST00000596161 TEKT3Q9BXF9 490 aa22.68■■□□□ 1.22
CCDC61-205ENST00000596161 DOCK5Q9H7D0 1870 aa22.67■■□□□ 1.22
CCDC61-205ENST00000596161 VPS37CA5D8V6 355 aaPredicted RBP22.67■■□□□ 1.22
CCDC61-205ENST00000596161 DDX39AO00148 427 aaKnown RBP22.67■■□□□ 1.22
CCDC61-205ENST00000596161 ARVCFO00192 962 aa22.67■■□□□ 1.22
CCDC61-205ENST00000596161 TBX3O15119 743 aa22.67■■□□□ 1.22
CCDC61-205ENST00000596161 DHX15O43143 795 aaKnown RBP22.67■■□□□ 1.22
CCDC61-205ENST00000596161 SLC37A4O43826 429 aa22.67■■□□□ 1.22
CCDC61-205ENST00000596161 MARCH6O60337 910 aa22.67■■□□□ 1.22
CCDC61-205ENST00000596161 GAS7O60861 476 aa22.67■■□□□ 1.22
CCDC61-205ENST00000596161 BAG4O95429 457 aaKnown RBP22.67■■□□□ 1.22
CCDC61-205ENST00000596161 F2P00734 622 aa22.67■■□□□ 1.22
CCDC61-205ENST00000596161 LGALS2P05162 132 aa22.67■■□□□ 1.22
CCDC61-205ENST00000596161 TCF7P36402 384 aaPredicted RBP22.67■■□□□ 1.22
CCDC61-205ENST00000596161 ACTR2P61160 394 aa22.67■■□□□ 1.22
CCDC61-205ENST00000596161 ORC2Q13416 577 aaPredicted RBP22.67■■□□□ 1.22
CCDC61-205ENST00000596161 LRCH2Q5VUJ6 765 aa22.67■■□□□ 1.22
CCDC61-205ENST00000596161 ZNF746Q6NUN9 644 aaPredicted RBP22.67■■□□□ 1.22
CCDC61-205ENST00000596161 ETNPPLQ8TBG4 499 aa22.67■■□□□ 1.22
CCDC61-205ENST00000596161 EVI5O60447 810 aa22.66■■□□□ 1.22
CCDC61-205ENST00000596161 ZNF286BP0CG31 522 aa22.66■■□□□ 1.22
CCDC61-205ENST00000596161 ATP2B1P20020 1258 aa22.66■■□□□ 1.22
CCDC61-205ENST00000596161 PSEN2P49810 448 aa22.66■■□□□ 1.22
CCDC61-205ENST00000596161 PSMC6P62333 389 aa22.66■■□□□ 1.22
CCDC61-205ENST00000596161 UTP14CQ5TAP6 766 aaKnown RBP22.66■■□□□ 1.22
CCDC61-205ENST00000596161 SLC43A3Q8NBI5 491 aa22.66■■□□□ 1.22
CCDC61-205ENST00000596161 UIMC1Q96RL1 719 aa22.66■■□□□ 1.22
CCDC61-205ENST00000596161 KCNMB3Q9NPA1 279 aa22.66■■□□□ 1.22
CCDC61-205ENST00000596161 ZNF215Q9UL58 517 aaPredicted RBP22.66■■□□□ 1.22
CCDC61-205ENST00000596161 ATP11BQ9Y2G3 1177 aa22.66■■□□□ 1.22
CCDC61-205ENST00000596161 GSTTP1A0A1W2PQM5 241 aa22.65■■□□□ 1.22
CCDC61-205ENST00000596161 NEMFO60524 1076 aa22.65■■□□□ 1.22
CCDC61-205ENST00000596161 PDIA4P13667 645 aaKnown RBP22.65■■□□□ 1.22
CCDC61-205ENST00000596161 SYT1P21579 422 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms