RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 EARS2Q5JPH6 523 aaKnown RBP16.31■□□□□ 0.2
LIG1-208ENST00000595758 SLC39A5Q6ZMH5 540 aa16.31■□□□□ 0.2
LIG1-208ENST00000595758 NEK8Q86SG6 692 aa16.31■□□□□ 0.2
LIG1-208ENST00000595758 INTS4Q96HW7 963 aaKnown RBP16.31■□□□□ 0.2
LIG1-208ENST00000595758 SDF4Q9BRK5 362 aa16.31■□□□□ 0.2
LIG1-208ENST00000595758 STARD7Q9NQZ5 370 aa16.31■□□□□ 0.2
LIG1-208ENST00000595758 MYH7BA7E2Y1 1941 aa16.31■□□□□ 0.2
LIG1-208ENST00000595758 CYP3A7-CYP3A51PA0A087WV96 503 aa16.3■□□□□ 0.2
LIG1-208ENST00000595758 FAM205CA6NFA0 338 aa16.3■□□□□ 0.2
LIG1-208ENST00000595758 NOP56O00567 594 aaKnown RBP16.3■□□□□ 0.2
LIG1-208ENST00000595758 PPFIA4O75335 1185 aa16.3■□□□□ 0.2
LIG1-208ENST00000595758 CYP3A7P24462 503 aa16.3■□□□□ 0.2
LIG1-208ENST00000595758 PURAQ00577 322 aaKnown RBP16.3■□□□□ 0.2
LIG1-208ENST00000595758 SP4Q02446 784 aa16.3■□□□□ 0.2
LIG1-208ENST00000595758 GNL2Q13823 731 aaKnown RBP16.3■□□□□ 0.2
LIG1-208ENST00000595758 LETM2Q2VYF4 491 aa16.3■□□□□ 0.2
LIG1-208ENST00000595758 MOXD1Q6UVY6 613 aa16.3■□□□□ 0.2
LIG1-208ENST00000595758 DPF3Q92784 378 aa16.3■□□□□ 0.2
LIG1-208ENST00000595758 LENG9Q96B70 501 aa16.3■□□□□ 0.2
LIG1-208ENST00000595758 MTG1Q9BT17 334 aaPredicted RBP16.3■□□□□ 0.2
LIG1-208ENST00000595758 FOXP1Q9H334 677 aaPredicted RBP16.3■□□□□ 0.2
LIG1-208ENST00000595758 NFASCO94856 1347 aa16.29■□□□□ 0.2
LIG1-208ENST00000595758 H3BQV1 296 aa16.29■□□□□ 0.2
LIG1-208ENST00000595758 IPO5O00410 1097 aaKnown RBP16.29■□□□□ 0.2
LIG1-208ENST00000595758 TDP2O95551 362 aa16.29■□□□□ 0.2
LIG1-208ENST00000595758 HOXD8P13378 290 aaPredicted RBP16.29■□□□□ 0.2
LIG1-208ENST00000595758 ITGB3BPQ13352 177 aaPredicted RBP16.29■□□□□ 0.2
LIG1-208ENST00000595758 LRRC26Q2I0M4 334 aa16.29■□□□□ 0.2
LIG1-208ENST00000595758 Q4G0T1 1027 aa16.29■□□□□ 0.2
LIG1-208ENST00000595758 LARP1BQ659C4 914 aaKnown RBP16.29■□□□□ 0.2
LIG1-208ENST00000595758 MBOAT7Q96N66 472 aa16.29■□□□□ 0.2
LIG1-208ENST00000595758 UIMC1Q96RL1 719 aa16.29■□□□□ 0.2
LIG1-208ENST00000595758 GPR20Q99678 358 aa16.29■□□□□ 0.2
LIG1-208ENST00000595758 NAP1L4Q99733 375 aaKnown RBP16.29■□□□□ 0.2
LIG1-208ENST00000595758 ZNF577Q9BSK1 485 aa16.29■□□□□ 0.2
LIG1-208ENST00000595758 JPH1Q9HDC5 661 aaPredicted RBP16.29■□□□□ 0.2
LIG1-208ENST00000595758 FOXD4L1Q9NU39 408 aa16.29■□□□□ 0.2
LIG1-208ENST00000595758 A0A0U1RQG5 324 aaPredicted RBP16.28■□□□□ 0.2
LIG1-208ENST00000595758 CCNT1O60563 726 aaKnown RBP16.28■□□□□ 0.2
LIG1-208ENST00000595758 GCFC2P16383 781 aaKnown RBP16.28■□□□□ 0.2
LIG1-208ENST00000595758 SNX17Q15036 470 aa16.28■□□□□ 0.2
LIG1-208ENST00000595758 PPP4R3AQ6IN85 833 aa16.28■□□□□ 0.2
LIG1-208ENST00000595758 TBC1D22BQ9NU19 505 aa16.28■□□□□ 0.2
LIG1-208ENST00000595758 SLC9A2Q9UBY0 812 aa16.28■□□□□ 0.2
LIG1-208ENST00000595758 DDX25Q9UHL0 483 aaKnown RBP16.28■□□□□ 0.2
LIG1-208ENST00000595758 MSH4O15457 936 aa16.27■□□□□ 0.2
LIG1-208ENST00000595758 DHX15O43143 795 aaKnown RBP16.27■□□□□ 0.2
LIG1-208ENST00000595758 EVI5O60447 810 aa16.27■□□□□ 0.2
LIG1-208ENST00000595758 HSP90AA1P07900 732 aaKnown RBP16.27■□□□□ 0.2
LIG1-208ENST00000595758 PDCP20941 246 aa16.27■□□□□ 0.2
LIG1-208ENST00000595758 RTP1P59025 263 aa16.27■□□□□ 0.2
LIG1-208ENST00000595758 PSMC6P62333 389 aa16.27■□□□□ 0.2
LIG1-208ENST00000595758 ITGA7Q13683 1181 aa16.27■□□□□ 0.2
LIG1-208ENST00000595758 C1orf53Q5VUE5 145 aa16.27■□□□□ 0.2
LIG1-208ENST00000595758 MCTP1Q6DN14 999 aa16.27■□□□□ 0.2
LIG1-208ENST00000595758 NOSTRINQ8IVI9 506 aa16.27■□□□□ 0.2
LIG1-208ENST00000595758 SEPT1Q8WYJ6 367 aa16.27■□□□□ 0.2
LIG1-208ENST00000595758 ATP11BQ9Y2G3 1177 aa16.27■□□□□ 0.2
LIG1-208ENST00000595758 TELO2Q9Y4R8 837 aa16.27■□□□□ 0.2
LIG1-208ENST00000595758 GRIN2DO15399 1336 aa16.26■□□□□ 0.19
LIG1-208ENST00000595758 GSTTP1A0A1W2PQM5 241 aa16.26■□□□□ 0.19
LIG1-208ENST00000595758 KIF28PB7ZC32 967 aa16.26■□□□□ 0.19
LIG1-208ENST00000595758 DDX39AO00148 427 aaKnown RBP16.26■□□□□ 0.19
LIG1-208ENST00000595758 ARVCFO00192 962 aa16.26■□□□□ 0.19
LIG1-208ENST00000595758 SLC37A4O43826 429 aa16.26■□□□□ 0.19
LIG1-208ENST00000595758 ZNF286BP0CG31 522 aa16.26■□□□□ 0.19
LIG1-208ENST00000595758 ATP2B1P20020 1258 aa16.26■□□□□ 0.19
LIG1-208ENST00000595758 U2AF2P26368 475 aaKnown RBP eCLIP16.26■□□□□ 0.19
LIG1-208ENST00000595758 CDK7P50613 346 aa16.26■□□□□ 0.19
LIG1-208ENST00000595758 CHMP4BP1P59074 171 aa16.26■□□□□ 0.19
LIG1-208ENST00000595758 TRIM60Q495X7 471 aa16.26■□□□□ 0.19
LIG1-208ENST00000595758 KAT2BQ92831 832 aa16.26■□□□□ 0.19
LIG1-208ENST00000595758 SLC5A5Q92911 643 aa16.26■□□□□ 0.19
LIG1-208ENST00000595758 SEZ6LQ9BYH1 1024 aa16.26■□□□□ 0.19
LIG1-208ENST00000595758 PQBP1O60828 265 aaKnown RBP16.25■□□□□ 0.19
LIG1-208ENST00000595758 CCNE2O96020 404 aa16.25■□□□□ 0.19
LIG1-208ENST00000595758 F2P00734 622 aa16.25■□□□□ 0.19
LIG1-208ENST00000595758 LGALS2P05162 132 aa16.25■□□□□ 0.19
LIG1-208ENST00000595758 TCF7P36402 384 aaPredicted RBP16.25■□□□□ 0.19
LIG1-208ENST00000595758 PSEN2P49810 448 aa16.25■□□□□ 0.19
LIG1-208ENST00000595758 ACTR2P61160 394 aa16.25■□□□□ 0.19
LIG1-208ENST00000595758 TLE2Q04725 743 aa16.25■□□□□ 0.19
LIG1-208ENST00000595758 NBPF20Q3BBV1 942 aa16.25■□□□□ 0.19
LIG1-208ENST00000595758 UTP14CQ5TAP6 766 aaKnown RBP16.25■□□□□ 0.19
LIG1-208ENST00000595758 C7orf61Q8IZ16 206 aa16.25■□□□□ 0.19
LIG1-208ENST00000595758 SLC43A3Q8NBI5 491 aa16.25■□□□□ 0.19
LIG1-208ENST00000595758 RIT2Q99578 217 aa16.25■□□□□ 0.19
LIG1-208ENST00000595758 C16orf70Q9BSU1 422 aa16.25■□□□□ 0.19
LIG1-208ENST00000595758 KATNAL1Q9BW62 490 aa16.25■□□□□ 0.19
LIG1-208ENST00000595758 TCEAL9Q9UHQ7 104 aa16.25■□□□□ 0.19
LIG1-208ENST00000595758 NR2E3Q9Y5X4 410 aa16.25■□□□□ 0.19
LIG1-208ENST00000595758 PDE4DIPQ5VU43 2346 aa16.24■□□□□ 0.19
LIG1-208ENST00000595758 H3BRB1 525 aa16.24■□□□□ 0.19
LIG1-208ENST00000595758 MARCH6O60337 910 aa16.24■□□□□ 0.19
LIG1-208ENST00000595758 GAS7O60861 476 aa16.24■□□□□ 0.19
LIG1-208ENST00000595758 KRT76Q01546 638 aa16.24■□□□□ 0.19
LIG1-208ENST00000595758 MFSD10Q14728 455 aa16.24■□□□□ 0.19
LIG1-208ENST00000595758 LRCH2Q5VUJ6 765 aa16.24■□□□□ 0.19
LIG1-208ENST00000595758 ZNF746Q6NUN9 644 aaPredicted RBP16.24■□□□□ 0.19
LIG1-208ENST00000595758 ANKRD33Q7Z3H0 272 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms