RNA–Protein interactions for RNA: ENST00000595756.1

HOMER3-208, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-208ENST00000595756 NBNO60934 754 aa20.6■□□□□ 0.89
HOMER3-208ENST00000595756 WDR5P61964 334 aaKnown RBP20.6■□□□□ 0.89
HOMER3-208ENST00000595756 TRAF7Q6Q0C0 670 aa20.6■□□□□ 0.89
HOMER3-208ENST00000595756 USP17L6PQ6QN14 398 aa20.6■□□□□ 0.89
HOMER3-208ENST00000595756 TMTC3Q6ZXV5 915 aa20.6■□□□□ 0.89
HOMER3-208ENST00000595756 SERINC5Q86VE9 423 aa20.6■□□□□ 0.89
HOMER3-208ENST00000595756 KIF28PB7ZC32 967 aa20.59■□□□□ 0.89
HOMER3-208ENST00000595756 H3BRB1 525 aa20.59■□□□□ 0.89
HOMER3-208ENST00000595756 EFCAB14O75071 495 aa20.59■□□□□ 0.89
HOMER3-208ENST00000595756 RXRAP19793 462 aa20.59■□□□□ 0.89
HOMER3-208ENST00000595756 HIC1Q14526 733 aa20.59■□□□□ 0.89
HOMER3-208ENST00000595756 SYMPKQ92797 1274 aaKnown RBP20.59■□□□□ 0.89
HOMER3-208ENST00000595756 WNT8BQ93098 351 aa20.59■□□□□ 0.89
HOMER3-208ENST00000595756 SENP7Q9BQF6 1050 aa20.59■□□□□ 0.89
HOMER3-208ENST00000595756 USP26Q9BXU7 913 aa20.59■□□□□ 0.89
HOMER3-208ENST00000595756 TUT1Q9H6E5 874 aaKnown RBP20.59■□□□□ 0.89
HOMER3-208ENST00000595756 EMSYQ7Z589 1322 aa20.58■□□□□ 0.89
HOMER3-208ENST00000595756 C17orf102A2RUQ5 167 aa20.58■□□□□ 0.89
HOMER3-208ENST00000595756 IGFBP4P22692 258 aa20.58■□□□□ 0.89
HOMER3-208ENST00000595756 ZNF200P98182 395 aaPredicted RBP20.58■□□□□ 0.89
HOMER3-208ENST00000595756 TJAP1Q5JTD0 557 aa20.58■□□□□ 0.89
HOMER3-208ENST00000595756 ZNF618Q5T7W0 954 aa20.58■□□□□ 0.89
HOMER3-208ENST00000595756 CYFIP1Q7L576 1253 aa20.58■□□□□ 0.89
HOMER3-208ENST00000595756 CMTR1Q8N1G2 835 aaKnown RBP20.58■□□□□ 0.89
HOMER3-208ENST00000595756 GPR20Q99678 358 aa20.58■□□□□ 0.89
HOMER3-208ENST00000595756 LRRC2Q9BYS8 371 aa20.58■□□□□ 0.89
HOMER3-208ENST00000595756 THEGQ9P2T0 379 aa20.58■□□□□ 0.89
HOMER3-208ENST00000595756 ABHD14A-ACY1A0A1B0GW23 586 aa20.57■□□□□ 0.88
HOMER3-208ENST00000595756 SMIM10L2AP0DMW4 78 aa20.57■□□□□ 0.88
HOMER3-208ENST00000595756 SMIM10L2BP0DMW5 78 aa20.57■□□□□ 0.88
HOMER3-208ENST00000595756 NLRX1Q86UT6 975 aa20.57■□□□□ 0.88
HOMER3-208ENST00000595756 MICU3Q86XE3 530 aa20.57■□□□□ 0.88
HOMER3-208ENST00000595756 FANCBQ8NB91 859 aa20.57■□□□□ 0.88
HOMER3-208ENST00000595756 GIMAP8Q8ND71 665 aaPredicted RBP20.57■□□□□ 0.88
HOMER3-208ENST00000595756 GPRASP2Q96D09 838 aa20.57■□□□□ 0.88
HOMER3-208ENST00000595756 CDHR1Q96JP9 859 aa20.57■□□□□ 0.88
HOMER3-208ENST00000595756 BCAS3Q9H6U6 928 aa20.57■□□□□ 0.88
HOMER3-208ENST00000595756 PSTPIP2Q9H939 334 aa20.57■□□□□ 0.88
HOMER3-208ENST00000595756 RTEL1Q9NZ71 1219 aa20.57■□□□□ 0.88
HOMER3-208ENST00000595756 ZNF215Q9UL58 517 aaPredicted RBP20.57■□□□□ 0.88
HOMER3-208ENST00000595756 CNTNAP5Q8WYK1 1306 aa20.56■□□□□ 0.88
HOMER3-208ENST00000595756 SIP14410 1827 aa20.56■□□□□ 0.88
HOMER3-208ENST00000595756 CAND2O75155 1236 aa20.56■□□□□ 0.88
HOMER3-208ENST00000595756 TAP1Q03518 808 aa20.56■□□□□ 0.88
HOMER3-208ENST00000595756 KRT32Q14532 448 aa20.56■□□□□ 0.88
HOMER3-208ENST00000595756 MBTPS1Q14703 1052 aa20.56■□□□□ 0.88
HOMER3-208ENST00000595756 APOA5Q6Q788 366 aa20.56■□□□□ 0.88
HOMER3-208ENST00000595756 ATXN2LQ8WWM7 1075 aaKnown RBP20.56■□□□□ 0.88
HOMER3-208ENST00000595756 PPM1EQ8WY54 764 aa20.56■□□□□ 0.88
HOMER3-208ENST00000595756 ATP6V0A1Q93050 837 aa20.56■□□□□ 0.88
HOMER3-208ENST00000595756 PRDM6Q9NQX0 595 aa20.56■□□□□ 0.88
HOMER3-208ENST00000595756 RBM28Q9NW13 759 aaKnown RBP20.56■□□□□ 0.88
HOMER3-208ENST00000595756 TLL1O43897 1013 aa20.55■□□□□ 0.88
HOMER3-208ENST00000595756 POU3F3P20264 500 aaPredicted RBP20.55■□□□□ 0.88
HOMER3-208ENST00000595756 DEFB103AP81534 67 aa20.55■□□□□ 0.88
HOMER3-208ENST00000595756 TSGA10IPQ3SY00 556 aa20.55■□□□□ 0.88
HOMER3-208ENST00000595756 SYNE3Q6ZMZ3 975 aa20.55■□□□□ 0.88
HOMER3-208ENST00000595756 RAB11FIP4Q86YS3 637 aa20.55■□□□□ 0.88
HOMER3-208ENST00000595756 TEX2Q8IWB9 1127 aa20.55■□□□□ 0.88
HOMER3-208ENST00000595756 NEK1Q96PY6 1258 aa20.55■□□□□ 0.88
HOMER3-208ENST00000595756 KAT6AQ92794 2004 aa20.54■□□□□ 0.88
HOMER3-208ENST00000595756 SPDYE3A6NKU9 549 aa20.54■□□□□ 0.88
HOMER3-208ENST00000595756 LGR5O75473 907 aa20.54■□□□□ 0.88
HOMER3-208ENST00000595756 ARHGEF15O94989 841 aa20.54■□□□□ 0.88
HOMER3-208ENST00000595756 THPOP40225 353 aa20.54■□□□□ 0.88
HOMER3-208ENST00000595756 IKBKEQ14164 716 aa20.54■□□□□ 0.88
HOMER3-208ENST00000595756 TCTN1Q2MV58 587 aa20.54■□□□□ 0.88
HOMER3-208ENST00000595756 PPP1R18Q6NYC8 613 aa20.54■□□□□ 0.88
HOMER3-208ENST00000595756 TRIM50Q86XT4 487 aa20.54■□□□□ 0.88
HOMER3-208ENST00000595756 PRRC2BQ5JSZ5 2229 aaKnown RBP20.53■□□□□ 0.88
HOMER3-208ENST00000595756 RSPH10B2B2RC85 870 aa20.53■□□□□ 0.88
HOMER3-208ENST00000595756 GTPBP6O43824 516 aaPredicted RBP20.53■□□□□ 0.88
HOMER3-208ENST00000595756 GJB5O95377 273 aa20.53■□□□□ 0.88
HOMER3-208ENST00000595756 RSPH10BP0C881 870 aa20.53■□□□□ 0.88
HOMER3-208ENST00000595756 GNAT1P11488 350 aa20.53■□□□□ 0.88
HOMER3-208ENST00000595756 KCNA2P16389 499 aa20.53■□□□□ 0.88
HOMER3-208ENST00000595756 HSPA4P34932 840 aa20.53■□□□□ 0.88
HOMER3-208ENST00000595756 EXOSC10Q01780 885 aaKnown RBP20.53■□□□□ 0.88
HOMER3-208ENST00000595756 MKRN4PQ13434 485 aaPredicted RBP20.53■□□□□ 0.88
HOMER3-208ENST00000595756 CCDC85BQ15834 202 aaPredicted RBP20.53■□□□□ 0.88
HOMER3-208ENST00000595756 UBE2SQ16763 222 aa20.53■□□□□ 0.88
HOMER3-208ENST00000595756 HEATR3Q7Z4Q2 680 aa20.53■□□□□ 0.88
HOMER3-208ENST00000595756 RNPEPQ9H4A4 650 aa20.53■□□□□ 0.88
HOMER3-208ENST00000595756 EHMT1Q9H9B1 1298 aa20.53■□□□□ 0.88
HOMER3-208ENST00000595756 COL4A6Q14031 1691 aa20.53■□□□□ 0.88
HOMER3-208ENST00000595756 hCG_1642624A0A1W2PR95 340 aa20.52■□□□□ 0.88
HOMER3-208ENST00000595756 EPOPA6NHQ4 379 aa20.52■□□□□ 0.88
HOMER3-208ENST00000595756 hCG_1984214I3L0E3 225 aa20.52■□□□□ 0.88
HOMER3-208ENST00000595756 TREHO43280 583 aa20.52■□□□□ 0.88
HOMER3-208ENST00000595756 HMGB1P09429 215 aaKnown RBP20.52■□□□□ 0.88
HOMER3-208ENST00000595756 ITGB5P18084 799 aa20.52■□□□□ 0.88
HOMER3-208ENST00000595756 RCAN1P53805 252 aa20.52■□□□□ 0.88
HOMER3-208ENST00000595756 DHX32Q7L7V1 743 aaKnown RBP20.52■□□□□ 0.88
HOMER3-208ENST00000595756 CCDC82Q8N4S0 544 aa20.52■□□□□ 0.88
HOMER3-208ENST00000595756 ZNF713Q8N859 430 aaPredicted RBP20.52■□□□□ 0.88
HOMER3-208ENST00000595756 ARNTL2Q8WYA1 636 aa20.52■□□□□ 0.88
HOMER3-208ENST00000595756 TSPYL2Q9H2G4 693 aaPredicted RBP20.52■□□□□ 0.88
HOMER3-208ENST00000595756 CERS4Q9HA82 394 aa20.52■□□□□ 0.88
HOMER3-208ENST00000595756 UBIAD1Q9Y5Z9 338 aa20.52■□□□□ 0.88
HOMER3-208ENST00000595756 MTCH2Q9Y6C9 303 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms