RNA–Protein interactions for RNA: ENST00000595158.5

UBA52-204, Transcript of ubiquitin A-52 residue ribosomal protein fusion product 1, human

APPRIS P1 TSL 3 BASIC

Gene UBA52, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA52-204	ENST00000595158	AP3B2	Q13367	1082 aa		28.92	■■■□□ 2.22
UBA52-204	ENST00000595158	C7orf31	Q8N865	590 aa		28.92	■■■□□ 2.22
UBA52-204	ENST00000595158	HERVK_113	Q902F9	699 aa		28.92	■■■□□ 2.22
UBA52-204	ENST00000595158	PHKB	Q93100	1093 aa		28.92	■■■□□ 2.22
UBA52-204	ENST00000595158	RNF26	Q9BY78	433 aa	Predicted RBP	28.92	■■■□□ 2.22
UBA52-204	ENST00000595158	ZMYND12	Q9H0C1	365 aa		28.92	■■■□□ 2.22
UBA52-204	ENST00000595158	NCOA5	Q9HCD5	579 aa	Known RBP	28.92	■■■□□ 2.22
UBA52-204	ENST00000595158	JADE2	Q9NQC1	790 aa		28.92	■■■□□ 2.22
UBA52-204	ENST00000595158	MTMR10	Q9NXD2	777 aa		28.92	■■■□□ 2.22
UBA52-204	ENST00000595158	NOD1	Q9Y239	953 aa		28.92	■■■□□ 2.22
UBA52-204	ENST00000595158	NOP56	O00567	594 aa	Known RBP	28.91	■■■□□ 2.22
UBA52-204	ENST00000595158	RBL2	Q08999	1139 aa		28.91	■■■□□ 2.22
UBA52-204	ENST00000595158	MTMR1	Q13613	665 aa		28.91	■■■□□ 2.22
UBA52-204	ENST00000595158	GIMAP8	Q8ND71	665 aa	Predicted RBP	28.91	■■■□□ 2.22
UBA52-204	ENST00000595158	DHX38	Q92620	1227 aa	Known RBP	28.91	■■■□□ 2.22
UBA52-204	ENST00000595158	PGBD1	Q96JS3	809 aa		28.91	■■■□□ 2.22
UBA52-204	ENST00000595158	TMEM260	Q9NX78	707 aa		28.91	■■■□□ 2.22
UBA52-204	ENST00000595158		H3BRB1	525 aa		28.9	■■■□□ 2.22
UBA52-204	ENST00000595158	MAFG	O15525	162 aa		28.9	■■■□□ 2.22
UBA52-204	ENST00000595158	HOXC8	P31273	242 aa		28.9	■■■□□ 2.22
UBA52-204	ENST00000595158	SREBF1	P36956	1147 aa		28.9	■■■□□ 2.22
UBA52-204	ENST00000595158	CCT2	P78371	535 aa	Known RBP	28.9	■■■□□ 2.22
UBA52-204	ENST00000595158	BFSP2	Q13515	415 aa		28.9	■■■□□ 2.22
UBA52-204	ENST00000595158	HIC1	Q14526	733 aa		28.9	■■■□□ 2.22
UBA52-204	ENST00000595158	CAGE1	Q8TC20	777 aa		28.9	■■■□□ 2.22
UBA52-204	ENST00000595158	ZNF274	Q96GC6	653 aa	Predicted RBP	28.9	■■■□□ 2.22
UBA52-204	ENST00000595158	TUT1	Q9H6E5	874 aa	Known RBP	28.9	■■■□□ 2.22
UBA52-204	ENST00000595158	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	28.89	■■■□□ 2.22
UBA52-204	ENST00000595158	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	28.89	■■■□□ 2.22
UBA52-204	ENST00000595158	FGB	P02675	491 aa		28.89	■■■□□ 2.22
UBA52-204	ENST00000595158	IQCF3	P0C7M6	154 aa		28.89	■■■□□ 2.22
UBA52-204	ENST00000595158	ANAPC15	P60006	121 aa		28.89	■■■□□ 2.22
UBA52-204	ENST00000595158	RPUSD2	Q8IZ73	545 aa	Known RBP	28.89	■■■□□ 2.22
UBA52-204	ENST00000595158	IL17RA	Q96F46	866 aa		28.89	■■■□□ 2.22
UBA52-204	ENST00000595158	MXRA8	Q9BRK3	442 aa		28.89	■■■□□ 2.22
UBA52-204	ENST00000595158	CXXC1	Q9P0U4	656 aa	Predicted RBP	28.89	■■■□□ 2.22
UBA52-204	ENST00000595158	ADAMTS3	O15072	1205 aa		28.88	■■■□□ 2.21
UBA52-204	ENST00000595158	PFKM	P08237	780 aa		28.88	■■■□□ 2.21
UBA52-204	ENST00000595158	RFC2	P35250	354 aa		28.88	■■■□□ 2.21
UBA52-204	ENST00000595158	CYP2W1	Q8TAV3	490 aa		28.88	■■■□□ 2.21
UBA52-204	ENST00000595158	CRYGN	Q8WXF5	182 aa		28.88	■■■□□ 2.21
UBA52-204	ENST00000595158	PDRG1	Q9NUG6	133 aa		28.88	■■■□□ 2.21
UBA52-204	ENST00000595158	SCN5A	Q14524	2016 aa		28.87	■■■□□ 2.21
UBA52-204	ENST00000595158	PPFIA3	O75145	1194 aa		28.87	■■■□□ 2.21
UBA52-204	ENST00000595158	CCDC155	Q8N6L0	562 aa		28.87	■■■□□ 2.21
UBA52-204	ENST00000595158	AFAP1L1	Q8TED9	768 aa		28.87	■■■□□ 2.21
UBA52-204	ENST00000595158	CCDC12	Q8WUD4	166 aa	Predicted RBP	28.87	■■■□□ 2.21
UBA52-204	ENST00000595158	SLC26A6	Q9BXS9	759 aa		28.87	■■■□□ 2.21
UBA52-204	ENST00000595158	KCNH7	Q9NS40	1196 aa		28.87	■■■□□ 2.21
UBA52-204	ENST00000595158	ZNF200	P98182	395 aa	Predicted RBP	28.86	■■■□□ 2.21
UBA52-204	ENST00000595158	PTK7	Q13308	1070 aa		28.86	■■■□□ 2.21
UBA52-204	ENST00000595158	TRIM71	Q2Q1W2	868 aa	Known RBP	28.86	■■■□□ 2.21
UBA52-204	ENST00000595158	CEP55	Q53EZ4	464 aa		28.86	■■■□□ 2.21
UBA52-204	ENST00000595158	ZNF697	Q5TEC3	545 aa		28.86	■■■□□ 2.21
UBA52-204	ENST00000595158	TRIM50	Q86XT4	487 aa		28.86	■■■□□ 2.21
UBA52-204	ENST00000595158	RETREG2	Q8NC44	543 aa		28.86	■■■□□ 2.21
UBA52-204	ENST00000595158	LARP6	Q9BRS8	491 aa	Known RBP	28.86	■■■□□ 2.21
UBA52-204	ENST00000595158	AKAP17A	Q02040	695 aa	Known RBP	28.85	■■■□□ 2.21
UBA52-204	ENST00000595158	SP4	Q02446	784 aa		28.85	■■■□□ 2.21
UBA52-204	ENST00000595158	JAKMIP3	Q5VZ66	844 aa		28.85	■■■□□ 2.21
UBA52-204	ENST00000595158	OTOP2	Q7RTS6	562 aa		28.85	■■■□□ 2.21
UBA52-204	ENST00000595158	WNT8B	Q93098	351 aa		28.85	■■■□□ 2.21
UBA52-204	ENST00000595158	C6orf50	Q9HD87	102 aa		28.85	■■■□□ 2.21
UBA52-204	ENST00000595158	TMEM265	A0A087WTH1	108 aa		28.84	■■■□□ 2.21
UBA52-204	ENST00000595158	GSTTP1	A0A1W2PQM5	241 aa		28.84	■■■□□ 2.21
UBA52-204	ENST00000595158	MEIS1	O00470	390 aa		28.84	■■■□□ 2.21
UBA52-204	ENST00000595158	SMIM10L2A	P0DMW4	78 aa		28.84	■■■□□ 2.21
UBA52-204	ENST00000595158	SMIM10L2B	P0DMW5	78 aa		28.84	■■■□□ 2.21
UBA52-204	ENST00000595158	ARHGAP4	P98171	946 aa		28.84	■■■□□ 2.21
UBA52-204	ENST00000595158	GPNMB	Q14956	572 aa		28.84	■■■□□ 2.21
UBA52-204	ENST00000595158	DEFB128	Q7Z7B8	93 aa		28.84	■■■□□ 2.21
UBA52-204	ENST00000595158	SERINC5	Q86VE9	423 aa		28.84	■■■□□ 2.21
UBA52-204	ENST00000595158	GUCD1	Q96NT3	240 aa		28.84	■■■□□ 2.21
UBA52-204	ENST00000595158	MTIF3	Q9H2K0	278 aa	Known RBP	28.84	■■■□□ 2.21
UBA52-204	ENST00000595158	TTYH1	Q9H313	450 aa	Predicted RBP	28.84	■■■□□ 2.21
UBA52-204	ENST00000595158	PKD2L1	Q9P0L9	805 aa		28.84	■■■□□ 2.21
UBA52-204	ENST00000595158	CYP3A4	P08684	503 aa		28.83	■■■□□ 2.21
UBA52-204	ENST00000595158	AR	P10275	920 aa		28.83	■■■□□ 2.21
UBA52-204	ENST00000595158	CKB	P12277	381 aa		28.83	■■■□□ 2.21
UBA52-204	ENST00000595158	SELP	P16109	830 aa		28.83	■■■□□ 2.21
UBA52-204	ENST00000595158	DNAJB2	P25686	324 aa		28.83	■■■□□ 2.21
UBA52-204	ENST00000595158	GNA11	P29992	359 aa		28.83	■■■□□ 2.21
UBA52-204	ENST00000595158	TCF7	P36402	384 aa	Predicted RBP	28.83	■■■□□ 2.21
UBA52-204	ENST00000595158	MCTP2	Q6DN12	878 aa		28.83	■■■□□ 2.21
UBA52-204	ENST00000595158	TRAF7	Q6Q0C0	670 aa		28.83	■■■□□ 2.21
UBA52-204	ENST00000595158	NIPA1	Q7RTP0	329 aa		28.83	■■■□□ 2.21
UBA52-204	ENST00000595158	REXO1	Q8N1G1	1221 aa	Known RBP	28.83	■■■□□ 2.21
UBA52-204	ENST00000595158	SEPT1	Q8WYJ6	367 aa		28.83	■■■□□ 2.21
UBA52-204	ENST00000595158	SH3GLB2	Q9NR46	395 aa		28.83	■■■□□ 2.21
UBA52-204	ENST00000595158	ZNF215	Q9UL58	517 aa	Predicted RBP	28.83	■■■□□ 2.21
UBA52-204	ENST00000595158	GRXCR1	A8MXD5	290 aa		28.82	■■■□□ 2.2
UBA52-204	ENST00000595158	LRRC8D	Q7L1W4	858 aa		28.82	■■■□□ 2.2
UBA52-204	ENST00000595158	CCDC148	Q8NFR7	591 aa		28.82	■■■□□ 2.2
UBA52-204	ENST00000595158	SEMA6B	Q9H3T3	888 aa		28.82	■■■□□ 2.2
UBA52-204	ENST00000595158	RNPEP	Q9H4A4	650 aa		28.82	■■■□□ 2.2
UBA52-204	ENST00000595158	VPS54	Q9P1Q0	977 aa		28.82	■■■□□ 2.2
UBA52-204	ENST00000595158	NFASC	O94856	1347 aa		28.82	■■■□□ 2.2
UBA52-204	ENST00000595158	TRIP12	Q14669	1992 aa	Predicted RBP	28.81	■■■□□ 2.2
UBA52-204	ENST00000595158	C17orf102	A2RUQ5	167 aa		28.81	■■■□□ 2.2
UBA52-204	ENST00000595158	FAM86B1	E9PN63	330 aa		28.81	■■■□□ 2.2

Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms