RNA–Protein interactions for RNA: ENST00000594399.1

USE1-204, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-204ENST00000594399 GIMAP8Q8ND71 665 aaPredicted RBP12.24□□□□□ -0.45
USE1-204ENST00000594399 UIMC1Q96RL1 719 aa12.24□□□□□ -0.45
USE1-204ENST00000594399 SENP7Q9BQF6 1050 aa12.24□□□□□ -0.45
USE1-204ENST00000594399 RAB34Q9BZG1 259 aa12.24□□□□□ -0.45
USE1-204ENST00000594399 TTC12Q9H892 705 aaPredicted RBP12.24□□□□□ -0.45
USE1-204ENST00000594399 PDGFCQ9NRA1 345 aa12.24□□□□□ -0.45
USE1-204ENST00000594399 TBC1D22BQ9NU19 505 aa12.24□□□□□ -0.45
USE1-204ENST00000594399 SRPRBQ9Y5M8 271 aaKnown RBP12.24□□□□□ -0.45
USE1-204ENST00000594399 PTCH2Q9Y6C5 1203 aa12.24□□□□□ -0.45
USE1-204ENST00000594399 DDX39AO00148 427 aaKnown RBP12.23□□□□□ -0.45
USE1-204ENST00000594399 CUTAO60888 179 aa12.23□□□□□ -0.45
USE1-204ENST00000594399 ATP9AO75110 1047 aa12.23□□□□□ -0.45
USE1-204ENST00000594399 PSMD10O75832 226 aa12.23□□□□□ -0.45
USE1-204ENST00000594399 ARIH2O95376 493 aa12.23□□□□□ -0.45
USE1-204ENST00000594399 ZNF865P0CJ78 1059 aaPredicted RBP12.23□□□□□ -0.45
USE1-204ENST00000594399 TXNP10599 105 aaKnown RBP12.23□□□□□ -0.45
USE1-204ENST00000594399 CYBAP13498 195 aa12.23□□□□□ -0.45
USE1-204ENST00000594399 GRK4P32298 578 aa12.23□□□□□ -0.45
USE1-204ENST00000594399 LONP1P36776 959 aaKnown RBP12.23□□□□□ -0.45
USE1-204ENST00000594399 ADCYAP1R1P41586 468 aa12.23□□□□□ -0.45
USE1-204ENST00000594399 NEDD9Q14511 834 aa12.23□□□□□ -0.45
USE1-204ENST00000594399 CCDC62Q6P9F0 684 aa12.23□□□□□ -0.45
USE1-204ENST00000594399 GJA10Q969M2 543 aa12.23□□□□□ -0.45
USE1-204ENST00000594399 ARMC5Q96C12 935 aa12.23□□□□□ -0.45
USE1-204ENST00000594399 JPH1Q9HDC5 661 aaPredicted RBP12.23□□□□□ -0.45
USE1-204ENST00000594399 VAV3Q9UKW4 847 aa12.23□□□□□ -0.45
USE1-204ENST00000594399 PCDHA7Q9UN72 937 aa12.23□□□□□ -0.45
USE1-204ENST00000594399 PCDHA12Q9UN75 941 aa12.23□□□□□ -0.45
USE1-204ENST00000594399 PDE4DIPQ5VU43 2346 aa12.22□□□□□ -0.45
USE1-204ENST00000594399 POTEMA6NI47 508 aa12.22□□□□□ -0.45
USE1-204ENST00000594399 NKRFO15226 690 aaKnown RBP eCLIP12.22□□□□□ -0.45
USE1-204ENST00000594399 DHX15O43143 795 aaKnown RBP12.22□□□□□ -0.45
USE1-204ENST00000594399 GGPS1O95749 300 aa12.22□□□□□ -0.45
USE1-204ENST00000594399 PRKAR2AP13861 404 aaKnown RBP12.22□□□□□ -0.45
USE1-204ENST00000594399 AKR1A1P14550 325 aa12.22□□□□□ -0.45
USE1-204ENST00000594399 TECP42680 631 aa12.22□□□□□ -0.45
USE1-204ENST00000594399 KRT76Q01546 638 aa12.22□□□□□ -0.45
USE1-204ENST00000594399 CACNB2Q08289 660 aaPredicted RBP12.22□□□□□ -0.45
USE1-204ENST00000594399 SPIRE1Q08AE8 756 aa12.22□□□□□ -0.45
USE1-204ENST00000594399 TRIM32Q13049 653 aa12.22□□□□□ -0.45
USE1-204ENST00000594399 PPP2R5CQ13362 524 aa12.22□□□□□ -0.45
USE1-204ENST00000594399 IL17AQ16552 155 aa12.22□□□□□ -0.45
USE1-204ENST00000594399 CCDC144BQ3MJ40 725 aa12.22□□□□□ -0.45
USE1-204ENST00000594399 SLC9C1Q4G0N8 1177 aa12.22□□□□□ -0.45
USE1-204ENST00000594399 PRAMEF19Q5SWL8 479 aa12.22□□□□□ -0.45
USE1-204ENST00000594399 MAP3K21Q5TCX8 1036 aa12.22□□□□□ -0.45
USE1-204ENST00000594399 IQSEC1Q6DN90 963 aa12.22□□□□□ -0.45
USE1-204ENST00000594399 IGSF22Q8N9C0 903 aa12.22□□□□□ -0.45
USE1-204ENST00000594399 ZNF579Q8NAF0 562 aaKnown RBP12.22□□□□□ -0.45
USE1-204ENST00000594399 AK8Q96MA6 479 aa12.22□□□□□ -0.45
USE1-204ENST00000594399 CSRNP2Q9H175 543 aa12.22□□□□□ -0.45
USE1-204ENST00000594399 UNC45AQ9H3U1 944 aa12.22□□□□□ -0.45
USE1-204ENST00000594399 DDX41Q9UJV9 622 aaKnown RBP12.22□□□□□ -0.45
USE1-204ENST00000594399 DOCK5Q9H7D0 1870 aa12.21□□□□□ -0.45
USE1-204ENST00000594399 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.21□□□□□ -0.45
USE1-204ENST00000594399 GOLGA6L4A6NEF3 574 aa12.21□□□□□ -0.45
USE1-204ENST00000594399 CHMP2AO43633 222 aa12.21□□□□□ -0.45
USE1-204ENST00000594399 FARP2O94887 1054 aaPredicted RBP12.21□□□□□ -0.45
USE1-204ENST00000594399 INHAP05111 366 aa12.21□□□□□ -0.45
USE1-204ENST00000594399 JAK3P52333 1124 aa12.21□□□□□ -0.45
USE1-204ENST00000594399 SP2Q02086 613 aa12.21□□□□□ -0.45
USE1-204ENST00000594399 TNFAIP2Q03169 654 aa12.21□□□□□ -0.45
USE1-204ENST00000594399 GRIN1Q05586 938 aa12.21□□□□□ -0.45
USE1-204ENST00000594399 LY6KQ17RY6 165 aa12.21□□□□□ -0.45
USE1-204ENST00000594399 DUSP28Q4G0W2 176 aa12.21□□□□□ -0.45
USE1-204ENST00000594399 AXDND1Q5T1B0 1012 aaPredicted RBP12.21□□□□□ -0.45
USE1-204ENST00000594399 ADALQ6DHV7 355 aa12.21□□□□□ -0.45
USE1-204ENST00000594399 NCAPH2Q6IBW4 605 aa12.21□□□□□ -0.45
USE1-204ENST00000594399 ZNF746Q6NUN9 644 aaPredicted RBP12.21□□□□□ -0.45
USE1-204ENST00000594399 METTL7BQ6UX53 244 aa12.21□□□□□ -0.45
USE1-204ENST00000594399 CYFIP1Q7L576 1253 aa12.21□□□□□ -0.45
USE1-204ENST00000594399 TRPV1Q8NER1 839 aa12.21□□□□□ -0.45
USE1-204ENST00000594399 CLIC6Q96NY7 704 aa12.21□□□□□ -0.45
USE1-204ENST00000594399 MLXIPQ9HAP2 919 aa12.21□□□□□ -0.45
USE1-204ENST00000594399 SLC9A2Q9UBY0 812 aa12.21□□□□□ -0.45
USE1-204ENST00000594399 LRWD1Q9UFC0 647 aa12.21□□□□□ -0.45
USE1-204ENST00000594399 FAM184BQ9ULE4 1060 aa12.21□□□□□ -0.45
USE1-204ENST00000594399 HTTP42858 3142 aa12.2□□□□□ -0.46
USE1-204ENST00000594399 A0A1W2PQ27 194 aa12.2□□□□□ -0.46
USE1-204ENST00000594399 A0A1W2PQ64 194 aa12.2□□□□□ -0.46
USE1-204ENST00000594399 A0A1W2PQD8 194 aa12.2□□□□□ -0.46
USE1-204ENST00000594399 DDX11L8A8MPP1 907 aa12.2□□□□□ -0.46
USE1-204ENST00000594399 WDR64B1ANS9 1081 aa12.2□□□□□ -0.46
USE1-204ENST00000594399 SEPT4O43236 478 aa12.2□□□□□ -0.46
USE1-204ENST00000594399 ADCY6O43306 1168 aa12.2□□□□□ -0.46
USE1-204ENST00000594399 SORBS3O60504 671 aa12.2□□□□□ -0.46
USE1-204ENST00000594399 PRPF40AO75400 957 aaKnown RBP12.2□□□□□ -0.46
USE1-204ENST00000594399 GH1P01241 217 aa12.2□□□□□ -0.46
USE1-204ENST00000594399 SMPD1P17405 629 aa12.2□□□□□ -0.46
USE1-204ENST00000594399 SFNP31947 248 aa12.2□□□□□ -0.46
USE1-204ENST00000594399 TXLNAP40222 546 aa12.2□□□□□ -0.46
USE1-204ENST00000594399 SP4Q02446 784 aa12.2□□□□□ -0.46
USE1-204ENST00000594399 ARHGAP1Q07960 439 aa12.2□□□□□ -0.46
USE1-204ENST00000594399 PDIA5Q14554 519 aa12.2□□□□□ -0.46
USE1-204ENST00000594399 CELF3Q5SZQ8 465 aaKnown RBP12.2□□□□□ -0.46
USE1-204ENST00000594399 GJC2Q5T442 439 aaPredicted RBP12.2□□□□□ -0.46
USE1-204ENST00000594399 HAUS3Q68CZ6 603 aa12.2□□□□□ -0.46
USE1-204ENST00000594399 B3GNT9Q6UX72 402 aa12.2□□□□□ -0.46
USE1-204ENST00000594399 MIER3Q7Z3K6 550 aa12.2□□□□□ -0.46
USE1-204ENST00000594399 DHX37Q8IY37 1157 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms