RNA–Protein interactions for RNA: ENST00000592763.5

ILF3-222, Transcript of interleukin enhancer binding factor 3, human

TSL 5 BASIC

Gene ILF3, Length 3,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ILF3-222	ENST00000592763	MTR	Q99707	1265 aa		12.01	□□□□□ -0.49
ILF3-222	ENST00000592763	GINS2	Q9Y248	185 aa		12.01	□□□□□ -0.49
ILF3-222	ENST00000592763	UBR3	Q6ZT12	1888 aa		12.01	□□□□□ -0.49
ILF3-222	ENST00000592763	PPP1R3G	B7ZBB8	358 aa		12.01	□□□□□ -0.49
ILF3-222	ENST00000592763	NOP56	O00567	594 aa	Known RBP	12.01	□□□□□ -0.49
ILF3-222	ENST00000592763	CCP110	O43303	1012 aa		12.01	□□□□□ -0.49
ILF3-222	ENST00000592763	CCNE1	P24864	410 aa		12.01	□□□□□ -0.49
ILF3-222	ENST00000592763	EPHX2	P34913	555 aa		12.01	□□□□□ -0.49
ILF3-222	ENST00000592763	COASY	Q13057	564 aa		12.01	□□□□□ -0.49
ILF3-222	ENST00000592763	GLIPR1L2	Q4G1C9	344 aa		12.01	□□□□□ -0.49
ILF3-222	ENST00000592763	NAALADL2	Q58DX5	795 aa		12.01	□□□□□ -0.49
ILF3-222	ENST00000592763	UNC13D	Q70J99	1090 aa		12.01	□□□□□ -0.49
ILF3-222	ENST00000592763	ARMC9	Q7Z3E5	817 aa		12.01	□□□□□ -0.49
ILF3-222	ENST00000592763	KCNH7	Q9NS40	1196 aa		12.01	□□□□□ -0.49
ILF3-222	ENST00000592763	IVNS1ABP	Q9Y6Y0	642 aa		12.01	□□□□□ -0.49
ILF3-222	ENST00000592763	CNTNAP1	P78357	1384 aa		12.01	□□□□□ -0.49
ILF3-222	ENST00000592763	BCOR	Q6W2J9	1755 aa		12	□□□□□ -0.49
ILF3-222	ENST00000592763	RAPGEF1	Q13905	1077 aa		12	□□□□□ -0.49
ILF3-222	ENST00000592763	SPA17	Q15506	151 aa		12	□□□□□ -0.49
ILF3-222	ENST00000592763	GNPTAB	Q3T906	1256 aa		12	□□□□□ -0.49
ILF3-222	ENST00000592763	TCP11X2	Q5H9J9	407 aa		12	□□□□□ -0.49
ILF3-222	ENST00000592763	VSTM4	Q8IW00	320 aa		12	□□□□□ -0.49
ILF3-222	ENST00000592763	BPIFA3	Q9BQP9	254 aa		12	□□□□□ -0.49
ILF3-222	ENST00000592763	LXN	Q9BS40	222 aa		12	□□□□□ -0.49
ILF3-222	ENST00000592763	PPP1R9A	Q9ULJ8	1098 aa		12	□□□□□ -0.49
ILF3-222	ENST00000592763	C4A	P0C0L4	1744 aa		12	□□□□□ -0.49
ILF3-222	ENST00000592763	NR2F2	P24468	414 aa		12	□□□□□ -0.49
ILF3-222	ENST00000592763	FXR2	P51116	673 aa	Known RBP eCLIP	12	□□□□□ -0.49	2e-10	■■□□□ 11.9
ILF3-222	ENST00000592763	E2F4	Q16254	413 aa		12	□□□□□ -0.49
ILF3-222	ENST00000592763	CNGA4	Q8IV77	575 aa		12	□□□□□ -0.49
ILF3-222	ENST00000592763	DHTKD1	Q96HY7	919 aa	Predicted RBP	12	□□□□□ -0.49
ILF3-222	ENST00000592763	CLMN	Q96JQ2	1002 aa		12	□□□□□ -0.49
ILF3-222	ENST00000592763	KIAA1683	Q9H0B3	1180 aa		12	□□□□□ -0.49
ILF3-222	ENST00000592763	MLXIP	Q9HAP2	919 aa		12	□□□□□ -0.49
ILF3-222	ENST00000592763	MAGEF1	Q9HAY2	307 aa		12	□□□□□ -0.49
ILF3-222	ENST00000592763	COL4A3BP	Q9Y5P4	624 aa		12	□□□□□ -0.49
ILF3-222	ENST00000592763	FZD9	O00144	591 aa		12	□□□□□ -0.49
ILF3-222	ENST00000592763	SREBF1	P36956	1147 aa		12	□□□□□ -0.49
ILF3-222	ENST00000592763	PMS1	P54277	932 aa	Known RBP	12	□□□□□ -0.49
ILF3-222	ENST00000592763	VGLL4	Q14135	290 aa		12	□□□□□ -0.49
ILF3-222	ENST00000592763	KSR1	Q8IVT5	923 aa		12	□□□□□ -0.49
ILF3-222	ENST00000592763	NEK11	Q8NG66	645 aa		12	□□□□□ -0.49
ILF3-222	ENST00000592763	TEX13B	Q9BXU2	312 aa		12	□□□□□ -0.49
ILF3-222	ENST00000592763	GUCA1B	Q9UMX6	200 aa		12	□□□□□ -0.49
ILF3-222	ENST00000592763	USP27X	A6NNY8	438 aa		11.99	□□□□□ -0.49
ILF3-222	ENST00000592763		K7ENM7	598 aa		11.99	□□□□□ -0.49
ILF3-222	ENST00000592763	EXOC3	O60645	756 aa		11.99	□□□□□ -0.49
ILF3-222	ENST00000592763	KCTD2	Q14681	263 aa		11.99	□□□□□ -0.49
ILF3-222	ENST00000592763	ZBTB9	Q96C00	473 aa		11.99	□□□□□ -0.49
ILF3-222	ENST00000592763	PNMA5	Q96PV4	448 aa		11.99	□□□□□ -0.49
ILF3-222	ENST00000592763	NACC1	Q96RE7	527 aa		11.99	□□□□□ -0.49
ILF3-222	ENST00000592763	SUGCT	Q9HAC7	445 aa		11.99	□□□□□ -0.49
ILF3-222	ENST00000592763	KBTBD4	Q9NVX7	518 aa		11.99	□□□□□ -0.49
ILF3-222	ENST00000592763	PRELP	P51888	382 aa		11.99	□□□□□ -0.49
ILF3-222	ENST00000592763	ARMCX5	Q6P1M9	558 aa		11.99	□□□□□ -0.49
ILF3-222	ENST00000592763	ADSSL1	Q8N142	457 aa		11.99	□□□□□ -0.49
ILF3-222	ENST00000592763	GLIS3	Q8NEA6	775 aa		11.99	□□□□□ -0.49
ILF3-222	ENST00000592763	FAM212A	Q96EL1	285 aa		11.99	□□□□□ -0.49
ILF3-222	ENST00000592763	MTMR9	Q96QG7	549 aa		11.99	□□□□□ -0.49
ILF3-222	ENST00000592763	PCIF1	Q9H4Z3	704 aa		11.99	□□□□□ -0.49
ILF3-222	ENST00000592763	RSPH10B2	B2RC85	870 aa		11.99	□□□□□ -0.49
ILF3-222	ENST00000592763	KIF5C	O60282	957 aa		11.99	□□□□□ -0.49
ILF3-222	ENST00000592763	ZNF500	O60304	480 aa	Predicted RBP	11.99	□□□□□ -0.49
ILF3-222	ENST00000592763	NR3C2	P08235	984 aa		11.99	□□□□□ -0.49
ILF3-222	ENST00000592763	RSPH10B	P0C881	870 aa		11.99	□□□□□ -0.49
ILF3-222	ENST00000592763	MARK3	P27448	753 aa		11.99	□□□□□ -0.49
ILF3-222	ENST00000592763	SARS	P49591	514 aa	Known RBP	11.99	□□□□□ -0.49
ILF3-222	ENST00000592763	NSUN6	Q8TEA1	469 aa	Known RBP	11.99	□□□□□ -0.49
ILF3-222	ENST00000592763	CEP170P1	Q96L14	293 aa		11.99	□□□□□ -0.49
ILF3-222	ENST00000592763	CCDC42	Q96M95	316 aa		11.99	□□□□□ -0.49
ILF3-222	ENST00000592763	SEPT9	Q9UHD8	586 aa	Predicted RBP	11.99	□□□□□ -0.49
ILF3-222	ENST00000592763	EML1	O00423	815 aa		11.98	□□□□□ -0.49
ILF3-222	ENST00000592763	MYL1	P05976	194 aa		11.98	□□□□□ -0.49
ILF3-222	ENST00000592763	CCDC175	P0C221	793 aa		11.98	□□□□□ -0.49
ILF3-222	ENST00000592763	PTGER2	P43116	358 aa		11.98	□□□□□ -0.49
ILF3-222	ENST00000592763	RRAGA	Q7L523	313 aa		11.98	□□□□□ -0.49
ILF3-222	ENST00000592763	MMTAG2	Q9BU76	263 aa	Known RBP	11.98	□□□□□ -0.49
ILF3-222	ENST00000592763	ACAD9	Q9H845	621 aa		11.98	□□□□□ -0.49
ILF3-222	ENST00000592763	RIPK3	Q9Y572	518 aa		11.98	□□□□□ -0.49
ILF3-222	ENST00000592763	SOWAHD	A6NJG2	315 aa		11.98	□□□□□ -0.49
ILF3-222	ENST00000592763	VWA5A	O00534	786 aa		11.98	□□□□□ -0.49
ILF3-222	ENST00000592763	IRF6	O14896	467 aa		11.98	□□□□□ -0.49
ILF3-222	ENST00000592763	TBC1D12	O60347	775 aa		11.98	□□□□□ -0.49
ILF3-222	ENST00000592763	HIRA	P54198	1017 aa	Predicted RBP	11.98	□□□□□ -0.49
ILF3-222	ENST00000592763	ZNF280A	P59817	542 aa	Predicted RBP	11.98	□□□□□ -0.49
ILF3-222	ENST00000592763	WNK4	Q96J92	1243 aa		11.98	□□□□□ -0.49
ILF3-222	ENST00000592763	ZNF668	Q96K58	619 aa	Predicted RBP	11.98	□□□□□ -0.49
ILF3-222	ENST00000592763	LY75	O60449	1722 aa		11.98	□□□□□ -0.49
ILF3-222	ENST00000592763	SBF2	Q86WG5	1849 aa		11.98	□□□□□ -0.49
ILF3-222	ENST00000592763	PLIN4	Q96Q06	1357 aa		11.98	□□□□□ -0.49
ILF3-222	ENST00000592763	FAM237A	A0A1B0GTK4	181 aa		11.98	□□□□□ -0.49
ILF3-222	ENST00000592763	TMEM150B	A6NC51	233 aa		11.98	□□□□□ -0.49
ILF3-222	ENST00000592763	C19orf81	C9J6K1	198 aa		11.98	□□□□□ -0.49
ILF3-222	ENST00000592763		M0R2N6	131 aa		11.98	□□□□□ -0.49
ILF3-222	ENST00000592763	RHOBTB3	O94955	611 aa		11.98	□□□□□ -0.49
ILF3-222	ENST00000592763	RPL13	P26373	211 aa	Known RBP	11.98	□□□□□ -0.49
ILF3-222	ENST00000592763	CCND2	P30279	289 aa		11.98	□□□□□ -0.49
ILF3-222	ENST00000592763	NMT1	P30419	496 aa	Known RBP	11.98	□□□□□ -0.49
ILF3-222	ENST00000592763	FKBP3	Q00688	224 aa	Known RBP	11.98	□□□□□ -0.49
ILF3-222	ENST00000592763	ECM1	Q16610	540 aa		11.98	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms