RNA–Protein interactions for RNA: ENST00000592674.1

RPRD1A-211, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 4

Gene RPRD1A, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-211ENST00000592674 LAMC2Q13753 1193 aa17.5■□□□□ 0.39
RPRD1A-211ENST00000592674 LRCH2Q5VUJ6 765 aa17.5■□□□□ 0.39
RPRD1A-211ENST00000592674 SLC5A5Q92911 643 aa17.5■□□□□ 0.39
RPRD1A-211ENST00000592674 FAM20AQ96MK3 541 aa17.5■□□□□ 0.39
RPRD1A-211ENST00000592674 TMEM106CQ9BVX2 250 aa17.5■□□□□ 0.39
RPRD1A-211ENST00000592674 TMEM60Q9H2L4 133 aa17.5■□□□□ 0.39
RPRD1A-211ENST00000592674 SPC25Q9HBM1 224 aa17.5■□□□□ 0.39
RPRD1A-211ENST00000592674 TBC1D22BQ9NU19 505 aa17.5■□□□□ 0.39
RPRD1A-211ENST00000592674 NFASCO94856 1347 aa17.49■□□□□ 0.39
RPRD1A-211ENST00000592674 DDX39AO00148 427 aaKnown RBP17.49■□□□□ 0.39
RPRD1A-211ENST00000592674 GAS7O60861 476 aa17.49■□□□□ 0.39
RPRD1A-211ENST00000592674 FARP2O94887 1054 aaPredicted RBP17.49■□□□□ 0.39
RPRD1A-211ENST00000592674 GJB1P08034 283 aa17.49■□□□□ 0.39
RPRD1A-211ENST00000592674 C6orf222P0C671 652 aaPredicted RBP17.49■□□□□ 0.39
RPRD1A-211ENST00000592674 GJA9P57773 515 aa17.49■□□□□ 0.39
RPRD1A-211ENST00000592674 SP4Q02446 784 aa17.49■□□□□ 0.39
RPRD1A-211ENST00000592674 METTL7BQ6UX53 244 aa17.49■□□□□ 0.39
RPRD1A-211ENST00000592674 SLFN12Q8IYM2 578 aa17.49■□□□□ 0.39
RPRD1A-211ENST00000592674 U2AF1L4Q8WU68 220 aaKnown RBP17.49■□□□□ 0.39
RPRD1A-211ENST00000592674 HAS1Q92839 578 aa17.49■□□□□ 0.39
RPRD1A-211ENST00000592674 EMID1Q96A84 441 aaPredicted RBP17.49■□□□□ 0.39
RPRD1A-211ENST00000592674 SPATA33Q96N06 139 aa17.49■□□□□ 0.39
RPRD1A-211ENST00000592674 ZNF396Q96N95 335 aaPredicted RBP17.49■□□□□ 0.39
RPRD1A-211ENST00000592674 RIT2Q99578 217 aa17.49■□□□□ 0.39
RPRD1A-211ENST00000592674 FTOQ9C0B1 505 aaKnown RBP eCLIP17.49■□□□□ 0.39
RPRD1A-211ENST00000592674 UPF3AQ9H1J1 476 aaKnown RBP17.49■□□□□ 0.39
RPRD1A-211ENST00000592674 JPH1Q9HDC5 661 aaPredicted RBP17.49■□□□□ 0.39
RPRD1A-211ENST00000592674 SLC9A2Q9UBY0 812 aa17.49■□□□□ 0.39
RPRD1A-211ENST00000592674 CLIC4Q9Y696 253 aa17.49■□□□□ 0.39
RPRD1A-211ENST00000592674 POTEFA5A3E0 1075 aa17.48■□□□□ 0.39
RPRD1A-211ENST00000592674 DHX15O43143 795 aaKnown RBP17.48■□□□□ 0.39
RPRD1A-211ENST00000592674 MYCNP04198 464 aaPredicted RBP17.48■□□□□ 0.39
RPRD1A-211ENST00000592674 OR52Z1P0C646 297 aa17.48■□□□□ 0.39
RPRD1A-211ENST00000592674 CEBPZQ03701 1054 aaKnown RBP17.48■□□□□ 0.39
RPRD1A-211ENST00000592674 PTGDRQ13258 359 aa17.48■□□□□ 0.39
RPRD1A-211ENST00000592674 SF3A1Q15459 793 aaKnown RBP17.48■□□□□ 0.39
RPRD1A-211ENST00000592674 TNS4Q8IZW8 715 aa17.48■□□□□ 0.39
RPRD1A-211ENST00000592674 C4orf32Q8N8J7 132 aa17.48■□□□□ 0.39
RPRD1A-211ENST00000592674 AFG1LQ8WV93 481 aa17.48■□□□□ 0.39
RPRD1A-211ENST00000592674 MTMR9Q96QG7 549 aa17.48■□□□□ 0.39
RPRD1A-211ENST00000592674 TEKT3Q9BXF9 490 aa17.48■□□□□ 0.39
RPRD1A-211ENST00000592674 CHMP5Q9NZZ3 219 aa17.48■□□□□ 0.39
RPRD1A-211ENST00000592674 TCEAL9Q9UHQ7 104 aa17.48■□□□□ 0.39
RPRD1A-211ENST00000592674 CEP131Q9UPN4 1083 aa17.48■□□□□ 0.39
RPRD1A-211ENST00000592674 ATP6V1DQ9Y5K8 247 aa17.48■□□□□ 0.39
RPRD1A-211ENST00000592674 KIAA1217Q5T5P2 1943 aa17.48■□□□□ 0.39
RPRD1A-211ENST00000592674 MYADML2A6NDP7 307 aa17.47■□□□□ 0.39
RPRD1A-211ENST00000592674 NOP56O00567 594 aaKnown RBP17.47■□□□□ 0.39
RPRD1A-211ENST00000592674 ADAMTS4O75173 837 aa17.47■□□□□ 0.39
RPRD1A-211ENST00000592674 PSMD10O75832 226 aa17.47■□□□□ 0.39
RPRD1A-211ENST00000592674 SGPL1O95470 568 aa17.47■□□□□ 0.39
RPRD1A-211ENST00000592674 BMP15O95972 392 aa17.47■□□□□ 0.39
RPRD1A-211ENST00000592674 TFRCP02786 760 aaKnown RBP17.47■□□□□ 0.39
RPRD1A-211ENST00000592674 TXKP42681 527 aa17.47■□□□□ 0.39
RPRD1A-211ENST00000592674 CPT1AP50416 773 aa17.47■□□□□ 0.39
RPRD1A-211ENST00000592674 IRX5P78411 483 aaPredicted RBP17.47■□□□□ 0.39
RPRD1A-211ENST00000592674 BEX3Q00994 111 aa17.47■□□□□ 0.39
RPRD1A-211ENST00000592674 FSCN1Q16658 493 aaKnown RBP17.47■□□□□ 0.39
RPRD1A-211ENST00000592674 HSDL1Q3SXM5 330 aa17.47■□□□□ 0.39
RPRD1A-211ENST00000592674 BRDTQ58F21 947 aaPredicted RBP17.47■□□□□ 0.39
RPRD1A-211ENST00000592674 RNF180Q86T96 592 aa17.47■□□□□ 0.39
RPRD1A-211ENST00000592674 PPTC7Q8NI37 304 aa17.47■□□□□ 0.39
RPRD1A-211ENST00000592674 ABHD8Q96I13 439 aa17.47■□□□□ 0.39
RPRD1A-211ENST00000592674 USP28Q96RU2 1077 aa17.47■□□□□ 0.39
RPRD1A-211ENST00000592674 TFIP11Q9UBB9 837 aaKnown RBP17.47■□□□□ 0.39
RPRD1A-211ENST00000592674 LAD1O00515 517 aa17.46■□□□□ 0.39
RPRD1A-211ENST00000592674 CTAGE5O15320 804 aa17.46■□□□□ 0.39
RPRD1A-211ENST00000592674 CHMP2AO43633 222 aa17.46■□□□□ 0.39
RPRD1A-211ENST00000592674 CCNE2O96020 404 aa17.46■□□□□ 0.39
RPRD1A-211ENST00000592674 GJA8P48165 433 aa17.46■□□□□ 0.39
RPRD1A-211ENST00000592674 NKX3-2P78367 333 aa17.46■□□□□ 0.39
RPRD1A-211ENST00000592674 ATP2C1P98194 919 aaPredicted RBP17.46■□□□□ 0.39
RPRD1A-211ENST00000592674 KRT76Q01546 638 aa17.46■□□□□ 0.39
RPRD1A-211ENST00000592674 DNM1Q05193 864 aaKnown RBP17.46■□□□□ 0.39
RPRD1A-211ENST00000592674 LRRC41Q15345 812 aa17.46■□□□□ 0.39
RPRD1A-211ENST00000592674 GNASQ5JWF2 1037 aa17.46■□□□□ 0.39
RPRD1A-211ENST00000592674 ARRDC4Q8NCT1 418 aa17.46■□□□□ 0.39
RPRD1A-211ENST00000592674 GPR20Q99678 358 aa17.46■□□□□ 0.39
RPRD1A-211ENST00000592674 CRISPLD2Q9H0B8 497 aa17.46■□□□□ 0.39
RPRD1A-211ENST00000592674 TTC12Q9H892 705 aaPredicted RBP17.46■□□□□ 0.39
RPRD1A-211ENST00000592674 OGDHLQ9ULD0 1010 aa17.46■□□□□ 0.39
RPRD1A-211ENST00000592674 TELO2Q9Y4R8 837 aa17.46■□□□□ 0.39
RPRD1A-211ENST00000592674 A6NJR5 290 aa17.45■□□□□ 0.38
RPRD1A-211ENST00000592674 MMP3P08254 477 aa17.45■□□□□ 0.38
RPRD1A-211ENST00000592674 CST5P28325 142 aaPredicted RBP17.45■□□□□ 0.38
RPRD1A-211ENST00000592674 ACTR2P61160 394 aa17.45■□□□□ 0.38
RPRD1A-211ENST00000592674 ATL3Q6DD88 541 aa17.45■□□□□ 0.38
RPRD1A-211ENST00000592674 ZNF746Q6NUN9 644 aaPredicted RBP17.45■□□□□ 0.38
RPRD1A-211ENST00000592674 KLHDC9Q8NEP7 349 aa17.45■□□□□ 0.38
RPRD1A-211ENST00000592674 UNC45AQ9H3U1 944 aa17.45■□□□□ 0.38
RPRD1A-211ENST00000592674 POLR3EQ9NVU0 708 aa17.45■□□□□ 0.38
RPRD1A-211ENST00000592674 VAV3Q9UKW4 847 aa17.45■□□□□ 0.38
RPRD1A-211ENST00000592674 PCDHA12Q9UN75 941 aa17.45■□□□□ 0.38
RPRD1A-211ENST00000592674 ELP1O95163 1332 aa17.45■□□□□ 0.38
RPRD1A-211ENST00000592674 ZEB2O60315 1214 aa17.44■□□□□ 0.38
RPRD1A-211ENST00000592674 MYL3P08590 195 aa17.44■□□□□ 0.38
RPRD1A-211ENST00000592674 NCLP19338 710 aaKnown RBP17.44■□□□□ 0.38
RPRD1A-211ENST00000592674 PRPHP41219 470 aa17.44■□□□□ 0.38
RPRD1A-211ENST00000592674 NASPP49321 788 aaPredicted RBP17.44■□□□□ 0.38
RPRD1A-211ENST00000592674 PPP2R5CQ13362 524 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms