RNA–Protein interactions for RNA: ENST00000592578.5

PSME3-215, Transcript of proteasome activator subunit 3, humanhuman

TSL 4

Gene PSME3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME3-215ENST00000592578 CASC1Q6TDU7 716 aa16.51■□□□□ 0.23
PSME3-215ENST00000592578 MB21D2Q8IYB1 491 aaPredicted RBP16.51■□□□□ 0.23
PSME3-215ENST00000592578 SAMD3Q8N6K7 520 aa16.51■□□□□ 0.23
PSME3-215ENST00000592578 IGDCC4Q8TDY8 1250 aa16.51■□□□□ 0.23
PSME3-215ENST00000592578 AFG1LQ8WV93 481 aa16.51■□□□□ 0.23
PSME3-215ENST00000592578 COPS5Q92905 334 aa16.51■□□□□ 0.23
PSME3-215ENST00000592578 MTA3Q9BTC8 594 aa16.51■□□□□ 0.23
PSME3-215ENST00000592578 LSG1Q9H089 658 aaKnown RBP16.51■□□□□ 0.23
PSME3-215ENST00000592578 RIOX1Q9H6W3 641 aa16.51■□□□□ 0.23
PSME3-215ENST00000592578 SENP2Q9HC62 589 aa16.51■□□□□ 0.23
PSME3-215ENST00000592578 COL20A1Q9P218 1284 aa16.51■□□□□ 0.23
PSME3-215ENST00000592578 MMP3P08254 477 aa16.5■□□□□ 0.23
PSME3-215ENST00000592578 IRS1P35568 1242 aa16.5■□□□□ 0.23
PSME3-215ENST00000592578 ANTXR2P58335 489 aa16.5■□□□□ 0.23
PSME3-215ENST00000592578 HTRA4P83105 476 aaPredicted RBP16.5■□□□□ 0.23
PSME3-215ENST00000592578 GPNMBQ14956 572 aa16.5■□□□□ 0.23
PSME3-215ENST00000592578 BMP8AQ7Z5Y6 402 aa16.5■□□□□ 0.23
PSME3-215ENST00000592578 HOMER1Q86YM7 354 aa16.5■□□□□ 0.23
PSME3-215ENST00000592578 DHX37Q8IY37 1157 aaKnown RBP16.5■□□□□ 0.23
PSME3-215ENST00000592578 TMTC2Q8N394 836 aa16.5■□□□□ 0.23
PSME3-215ENST00000592578 ZNF318Q5VUA4 2279 aa16.5■□□□□ 0.23
PSME3-215ENST00000592578 MICAL3Q7RTP6 2002 aa16.5■□□□□ 0.23
PSME3-215ENST00000592578 WDFY4Q6ZS81 3184 aa16.49■□□□□ 0.23
PSME3-215ENST00000592578 PPP1R11O60927 126 aaPredicted RBP16.49■□□□□ 0.23
PSME3-215ENST00000592578 MCM5P33992 734 aa16.49■□□□□ 0.23
PSME3-215ENST00000592578 HSD17B4P51659 736 aa16.49■□□□□ 0.23
PSME3-215ENST00000592578 GHRHRQ02643 423 aa16.49■□□□□ 0.23
PSME3-215ENST00000592578 SMAD2Q15796 467 aaKnown RBP16.49■□□□□ 0.23
PSME3-215ENST00000592578 SEPT14Q6ZU15 432 aa16.49■□□□□ 0.23
PSME3-215ENST00000592578 TMEM192Q8IY95 271 aa16.49■□□□□ 0.23
PSME3-215ENST00000592578 SP7Q8TDD2 431 aaPredicted RBP16.49■□□□□ 0.23
PSME3-215ENST00000592578 DHX38Q92620 1227 aaKnown RBP16.49■□□□□ 0.23
PSME3-215ENST00000592578 EDAQ92838 391 aa16.49■□□□□ 0.23
PSME3-215ENST00000592578 PBXIP1Q96AQ6 731 aa16.49■□□□□ 0.23
PSME3-215ENST00000592578 TMEM87BQ96K49 555 aa16.49■□□□□ 0.23
PSME3-215ENST00000592578 PIGSQ96S52 555 aa16.49■□□□□ 0.23
PSME3-215ENST00000592578 MAP3K14Q99558 947 aa16.49■□□□□ 0.23
PSME3-215ENST00000592578 ANO2Q9NQ90 1003 aa16.49■□□□□ 0.23
PSME3-215ENST00000592578 HDAC6Q9UBN7 1215 aa16.49■□□□□ 0.23
PSME3-215ENST00000592578 RWDD3Q9Y3V2 267 aa16.49■□□□□ 0.23
PSME3-215ENST00000592578 PNMA6FA0A0J9YX94 578 aa16.48■□□□□ 0.23
PSME3-215ENST00000592578 OPLAHO14841 1288 aa16.48■□□□□ 0.23
PSME3-215ENST00000592578 SLC27A2O14975 620 aa16.48■□□□□ 0.23
PSME3-215ENST00000592578 PRC1O43663 620 aa16.48■□□□□ 0.23
PSME3-215ENST00000592578 CYTH3O43739 400 aa16.48■□□□□ 0.23
PSME3-215ENST00000592578 EIF3JO75822 258 aaKnown RBP16.48■□□□□ 0.23
PSME3-215ENST00000592578 DDAH1O94760 285 aa16.48■□□□□ 0.23
PSME3-215ENST00000592578 ARIH2O95376 493 aa16.48■□□□□ 0.23
PSME3-215ENST00000592578 NR3C2P08235 984 aa16.48■□□□□ 0.23
PSME3-215ENST00000592578 EIF2AK2P19525 551 aaKnown RBP16.48■□□□□ 0.23
PSME3-215ENST00000592578 KIF5BP33176 963 aa16.48■□□□□ 0.23
PSME3-215ENST00000592578 PSEN2P49810 448 aa16.48■□□□□ 0.23
PSME3-215ENST00000592578 NECTIN1Q15223 517 aa16.48■□□□□ 0.23
PSME3-215ENST00000592578 ZNF618Q5T7W0 954 aa16.48■□□□□ 0.23
PSME3-215ENST00000592578 CCDC62Q6P9F0 684 aa16.48■□□□□ 0.23
PSME3-215ENST00000592578 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.48■□□□□ 0.232e-7■■■■■ 31.6
PSME3-215ENST00000592578 RPAINQ86UA6 219 aa16.48■□□□□ 0.23
PSME3-215ENST00000592578 CTCFLQ8NI51 663 aaPredicted RBP16.48■□□□□ 0.23
PSME3-215ENST00000592578 SEPT8Q92599 483 aa16.48■□□□□ 0.23
PSME3-215ENST00000592578 PPP2R3CQ969Q6 453 aa16.48■□□□□ 0.23
PSME3-215ENST00000592578 ALG1Q9BT22 464 aa16.48■□□□□ 0.23
PSME3-215ENST00000592578 LMAN2LQ9H0V9 348 aa16.48■□□□□ 0.23
PSME3-215ENST00000592578 PXMP2Q9NR77 195 aa16.48■□□□□ 0.23
PSME3-215ENST00000592578 MUTYHQ9UIF7 546 aa16.48■□□□□ 0.23
PSME3-215ENST00000592578 RSPH10B2B2RC85 870 aa16.47■□□□□ 0.23
PSME3-215ENST00000592578 GCOM1H8Y6P7 765 aaPredicted RBP16.47■□□□□ 0.23
PSME3-215ENST00000592578 RSPH10BP0C881 870 aa16.47■□□□□ 0.23
PSME3-215ENST00000592578 POLR2MP0CAP2 368 aa16.47■□□□□ 0.23
PSME3-215ENST00000592578 MFSD10Q14728 455 aa16.47■□□□□ 0.23
PSME3-215ENST00000592578 COL19A1Q14993 1142 aa16.47■□□□□ 0.23
PSME3-215ENST00000592578 SLC35G1Q2M3R5 365 aa16.47■□□□□ 0.23
PSME3-215ENST00000592578 RNF20Q5VTR2 975 aa16.47■□□□□ 0.23
PSME3-215ENST00000592578 CREB3L3Q68CJ9 461 aa16.47■□□□□ 0.23
PSME3-215ENST00000592578 NFXL1Q6ZNB6 911 aa16.47■□□□□ 0.23
PSME3-215ENST00000592578 RNF135Q8IUD6 432 aa16.47■□□□□ 0.23
PSME3-215ENST00000592578 ZNF654Q8IZM8 581 aa16.47■□□□□ 0.23
PSME3-215ENST00000592578 DBF4BQ8NFT6 615 aa16.47■□□□□ 0.23
PSME3-215ENST00000592578 CTAGE1Q96RT6 745 aa16.47■□□□□ 0.23
PSME3-215ENST00000592578 LY9Q9HBG7 655 aa16.47■□□□□ 0.23
PSME3-215ENST00000592578 CCDC69A6NI79 296 aa16.46■□□□□ 0.23
PSME3-215ENST00000592578 STXBP3O00186 592 aa16.46■□□□□ 0.23
PSME3-215ENST00000592578 GFRA3O60609 400 aa16.46■□□□□ 0.23
PSME3-215ENST00000592578 RB1P06400 928 aa16.46■□□□□ 0.23
PSME3-215ENST00000592578 GNAQP50148 359 aa16.46■□□□□ 0.23
PSME3-215ENST00000592578 SMAD4Q13485 552 aaKnown RBP16.46■□□□□ 0.23
PSME3-215ENST00000592578 LAMC2Q13753 1193 aa16.46■□□□□ 0.23
PSME3-215ENST00000592578 LY6KQ17RY6 165 aa16.46■□□□□ 0.23
PSME3-215ENST00000592578 KIAA0753Q2KHM9 967 aa16.46■□□□□ 0.23
PSME3-215ENST00000592578 KAT2BQ92831 832 aa16.46■□□□□ 0.23
PSME3-215ENST00000592578 LZTS2Q9BRK4 669 aa16.46■□□□□ 0.23
PSME3-215ENST00000592578 PDCD2LQ9BRP1 358 aa16.46■□□□□ 0.23
PSME3-215ENST00000592578 C11orf84Q9BUA3 381 aaPredicted RBP16.46■□□□□ 0.23
PSME3-215ENST00000592578 RALGAPA2Q2PPJ7 1873 aa16.46■□□□□ 0.22
PSME3-215ENST00000592578 TMEM221A6NGB7 291 aa16.45■□□□□ 0.22
PSME3-215ENST00000592578 M0R296 226 aa16.45■□□□□ 0.22
PSME3-215ENST00000592578 SH2B2O14492 632 aaPredicted RBP16.45■□□□□ 0.22
PSME3-215ENST00000592578 MBTPS2O43462 519 aa16.45■□□□□ 0.22
PSME3-215ENST00000592578 UPP2O95045 317 aa16.45■□□□□ 0.22
PSME3-215ENST00000592578 CALM1P0DP23 149 aa16.45■□□□□ 0.22
PSME3-215ENST00000592578 CALM2P0DP24 149 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms