RNA–Protein interactions for RNA: ENST00000592342.5

DNMT1-227, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-227ENST00000592342 MMP3P08254 477 aa23.56■■□□□ 1.36
DNMT1-227ENST00000592342 GCFC2P16383 781 aaKnown RBP23.56■■□□□ 1.36
DNMT1-227ENST00000592342 KCNA2P16389 499 aa23.56■■□□□ 1.36
DNMT1-227ENST00000592342 CCSAPQ6IQ19 270 aaPredicted RBP23.56■■□□□ 1.36
DNMT1-227ENST00000592342 NOSTRINQ8IVI9 506 aa23.56■■□□□ 1.36
DNMT1-227ENST00000592342 PPTC7Q8NI37 304 aa23.56■■□□□ 1.36
DNMT1-227ENST00000592342 GLT1D1Q96MS3 346 aa23.56■■□□□ 1.36
DNMT1-227ENST00000592342 DDX25Q9UHL0 483 aaKnown RBP23.56■■□□□ 1.36
DNMT1-227ENST00000592342 TCEAL9Q9UHQ7 104 aa23.56■■□□□ 1.36
DNMT1-227ENST00000592342 MYH7BA7E2Y1 1941 aa23.55■■□□□ 1.36
DNMT1-227ENST00000592342 A0A1W2PQ45 241 aaPredicted RBP23.55■■□□□ 1.36
DNMT1-227ENST00000592342 A0A1W2PQY0 241 aa23.55■■□□□ 1.36
DNMT1-227ENST00000592342 VPS37CA5D8V6 355 aaPredicted RBP23.55■■□□□ 1.36
DNMT1-227ENST00000592342 KPNA6O60684 536 aa23.55■■□□□ 1.36
DNMT1-227ENST00000592342 ATP2B1P20020 1258 aa23.55■■□□□ 1.36
DNMT1-227ENST00000592342 DGKDQ16760 1214 aa23.55■■□□□ 1.36
DNMT1-227ENST00000592342 Q4G0T1 1027 aa23.55■■□□□ 1.36
DNMT1-227ENST00000592342 CXCL17Q6UXB2 119 aa23.55■■□□□ 1.36
DNMT1-227ENST00000592342 UBE2Q1Q7Z7E8 422 aa23.55■■□□□ 1.36
DNMT1-227ENST00000592342 SPRYD3Q8NCJ5 442 aa23.55■■□□□ 1.36
DNMT1-227ENST00000592342 UIMC1Q96RL1 719 aa23.55■■□□□ 1.36
DNMT1-227ENST00000592342 BCAS3Q9H6U6 928 aa23.55■■□□□ 1.36
DNMT1-227ENST00000592342 STARD7Q9NQZ5 370 aa23.55■■□□□ 1.36
DNMT1-227ENST00000592342 NOL7Q9UMY1 257 aaKnown RBP23.55■■□□□ 1.36
DNMT1-227ENST00000592342 CYP3A7-CYP3A51PA0A087WV96 503 aa23.54■■□□□ 1.36
DNMT1-227ENST00000592342 KIF28PB7ZC32 967 aa23.54■■□□□ 1.36
DNMT1-227ENST00000592342 IPO5O00410 1097 aaKnown RBP23.54■■□□□ 1.36
DNMT1-227ENST00000592342 EDIL3O43854 480 aa23.54■■□□□ 1.36
DNMT1-227ENST00000592342 MARCH6O60337 910 aa23.54■■□□□ 1.36
DNMT1-227ENST00000592342 CABYRO75952 493 aa23.54■■□□□ 1.36
DNMT1-227ENST00000592342 COL6A1P12109 1028 aa23.54■■□□□ 1.36
DNMT1-227ENST00000592342 CYP3A7P24462 503 aa23.54■■□□□ 1.36
DNMT1-227ENST00000592342 HSDL1Q3SXM5 330 aa23.54■■□□□ 1.36
DNMT1-227ENST00000592342 PPP4R3AQ6IN85 833 aa23.54■■□□□ 1.36
DNMT1-227ENST00000592342 HTATIP2Q9BUP3 242 aa23.54■■□□□ 1.36
DNMT1-227ENST00000592342 JPH1Q9HDC5 661 aaPredicted RBP23.54■■□□□ 1.36
DNMT1-227ENST00000592342 SLC9A2Q9UBY0 812 aa23.54■■□□□ 1.36
DNMT1-227ENST00000592342 NFASCO94856 1347 aa23.54■■□□□ 1.36
DNMT1-227ENST00000592342 DDX39AO00148 427 aaKnown RBP23.53■■□□□ 1.36
DNMT1-227ENST00000592342 U2AF2P26368 475 aaKnown RBP eCLIP23.53■■□□□ 1.361e-8■■■■□ 21
DNMT1-227ENST00000592342 ATN1P54259 1190 aaPredicted RBP23.53■■□□□ 1.36
DNMT1-227ENST00000592342 TBC1D22BQ9NU19 505 aa23.53■■□□□ 1.36
DNMT1-227ENST00000592342 MSH4O15457 936 aa23.52■■□□□ 1.36
DNMT1-227ENST00000592342 PPFIA4O75335 1185 aa23.52■■□□□ 1.36
DNMT1-227ENST00000592342 RGS19P49795 217 aa23.52■■□□□ 1.36
DNMT1-227ENST00000592342 PURAQ00577 322 aaKnown RBP23.52■■□□□ 1.36
DNMT1-227ENST00000592342 ITGB3BPQ13352 177 aaPredicted RBP23.52■■□□□ 1.36
DNMT1-227ENST00000592342 LENG9Q96B70 501 aa23.52■■□□□ 1.36
DNMT1-227ENST00000592342 MTG1Q9BT17 334 aaPredicted RBP23.52■■□□□ 1.36
DNMT1-227ENST00000592342 SYT1P21579 422 aa23.51■■□□□ 1.35
DNMT1-227ENST00000592342 CHMP4BP1P59074 171 aa23.51■■□□□ 1.35
DNMT1-227ENST00000592342 SEPT1Q8WYJ6 367 aa23.51■■□□□ 1.35
DNMT1-227ENST00000592342 MBOAT7Q96N66 472 aa23.51■■□□□ 1.35
DNMT1-227ENST00000592342 GPR20Q99678 358 aa23.51■■□□□ 1.35
DNMT1-227ENST00000592342 ELP1O95163 1332 aa23.51■■□□□ 1.35
DNMT1-227ENST00000592342 SLC37A4O43826 429 aa23.5■■□□□ 1.35
DNMT1-227ENST00000592342 GAS7O60861 476 aa23.5■■□□□ 1.35
DNMT1-227ENST00000592342 SLC39A5Q6ZMH5 540 aa23.5■■□□□ 1.35
DNMT1-227ENST00000592342 TEKT3Q9BXF9 490 aa23.5■■□□□ 1.35
DNMT1-227ENST00000592342 A0A0U1RQG5 324 aaPredicted RBP23.49■■□□□ 1.35
DNMT1-227ENST00000592342 BAG4O95429 457 aaKnown RBP23.49■■□□□ 1.35
DNMT1-227ENST00000592342 TCF7P36402 384 aaPredicted RBP23.49■■□□□ 1.35
DNMT1-227ENST00000592342 TRAPPC10P48553 1259 aa23.49■■□□□ 1.35
DNMT1-227ENST00000592342 UTP14CQ5TAP6 766 aaKnown RBP23.49■■□□□ 1.35
DNMT1-227ENST00000592342 LRCH2Q5VUJ6 765 aa23.49■■□□□ 1.35
DNMT1-227ENST00000592342 SLC5A5Q92911 643 aa23.49■■□□□ 1.35
DNMT1-227ENST00000592342 RIT2Q99578 217 aa23.49■■□□□ 1.35
DNMT1-227ENST00000592342 KATNAL1Q9BW62 490 aa23.49■■□□□ 1.35
DNMT1-227ENST00000592342 DHX15O43143 795 aaKnown RBP23.48■■□□□ 1.35
DNMT1-227ENST00000592342 STX6O43752 255 aa23.48■■□□□ 1.35
DNMT1-227ENST00000592342 ZNF286BP0CG31 522 aa23.48■■□□□ 1.35
DNMT1-227ENST00000592342 MCM7P33993 719 aa23.48■■□□□ 1.35
DNMT1-227ENST00000592342 ACTR2P61160 394 aa23.48■■□□□ 1.35
DNMT1-227ENST00000592342 PSMC6P62333 389 aa23.48■■□□□ 1.35
DNMT1-227ENST00000592342 KRT76Q01546 638 aa23.48■■□□□ 1.35
DNMT1-227ENST00000592342 MLLT1Q03111 559 aaPredicted RBP23.48■■□□□ 1.35
DNMT1-227ENST00000592342 ITGA7Q13683 1181 aa23.48■■□□□ 1.35
DNMT1-227ENST00000592342 TTC38Q5R3I4 469 aa23.48■■□□□ 1.35
DNMT1-227ENST00000592342 POTEDQ86YR6 584 aa23.48■■□□□ 1.35
DNMT1-227ENST00000592342 DPF3Q92784 378 aa23.48■■□□□ 1.35
DNMT1-227ENST00000592342 SAMM50Q9Y512 469 aa23.48■■□□□ 1.35
DNMT1-227ENST00000592342 TBX3O15119 743 aa23.47■■□□□ 1.35
DNMT1-227ENST00000592342 NEMFO60524 1076 aa23.47■■□□□ 1.35
DNMT1-227ENST00000592342 LGALS2P05162 132 aa23.47■■□□□ 1.35
DNMT1-227ENST00000592342 HOXD8P13378 290 aaPredicted RBP23.47■■□□□ 1.35
DNMT1-227ENST00000592342 ZNF174Q15697 407 aa23.47■■□□□ 1.35
DNMT1-227ENST00000592342 CALCRLQ16602 461 aa23.47■■□□□ 1.35
DNMT1-227ENST00000592342 RILPL1Q5EBL4 403 aa23.47■■□□□ 1.35
DNMT1-227ENST00000592342 FERMT3Q86UX7 667 aa23.47■■□□□ 1.35
DNMT1-227ENST00000592342 ETNPPLQ8TBG4 499 aa23.47■■□□□ 1.35
DNMT1-227ENST00000592342 GJA10Q969M2 543 aa23.47■■□□□ 1.35
DNMT1-227ENST00000592342 FAM20AQ96MK3 541 aa23.47■■□□□ 1.35
DNMT1-227ENST00000592342 AZI2Q9H6S1 392 aa23.47■■□□□ 1.35
DNMT1-227ENST00000592342 ZNF215Q9UL58 517 aaPredicted RBP23.47■■□□□ 1.35
DNMT1-227ENST00000592342 TELO2Q9Y4R8 837 aa23.47■■□□□ 1.35
DNMT1-227ENST00000592342 GSTTP1A0A1W2PQM5 241 aa23.46■■□□□ 1.35
DNMT1-227ENST00000592342 CHMP2AO43633 222 aa23.46■■□□□ 1.35
DNMT1-227ENST00000592342 PDIA4P13667 645 aaKnown RBP23.46■■□□□ 1.35
DNMT1-227ENST00000592342 BRCA2P51587 3418 aa23.46■■□□□ 1.35
DNMT1-227ENST00000592342 ORC2Q13416 577 aaPredicted RBP23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms