RNA–Protein interactions for RNA: ENST00000592013.1

TNFRSF11A-204, Transcript of TNF receptor superfamily member 11a, humanhuman

TSL 2

Gene TNFRSF11A, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-204ENST00000592013 RSPH10B2B2RC85 870 aa22.65■■□□□ 1.22
TNFRSF11A-204ENST00000592013 RSPH10BP0C881 870 aa22.65■■□□□ 1.22
TNFRSF11A-204ENST00000592013 WDR5P61964 334 aaKnown RBP22.65■■□□□ 1.22
TNFRSF11A-204ENST00000592013 USP17L6PQ6QN14 398 aa22.65■■□□□ 1.22
TNFRSF11A-204ENST00000592013 TMTC3Q6ZXV5 915 aa22.65■■□□□ 1.22
TNFRSF11A-204ENST00000592013 CYFIP1Q7L576 1253 aa22.65■■□□□ 1.22
TNFRSF11A-204ENST00000592013 MICU3Q86XE3 530 aa22.65■■□□□ 1.22
TNFRSF11A-204ENST00000592013 DHX38Q92620 1227 aaKnown RBP22.65■■□□□ 1.22
TNFRSF11A-204ENST00000592013 CTAGE1Q96RT6 745 aa22.65■■□□□ 1.22
TNFRSF11A-204ENST00000592013 RTEL1Q9NZ71 1219 aa22.65■■□□□ 1.22
TNFRSF11A-204ENST00000592013 CDH23Q9H251 3354 aa22.65■■□□□ 1.22
TNFRSF11A-204ENST00000592013 MEIS2O14770 477 aa22.64■■□□□ 1.21
TNFRSF11A-204ENST00000592013 LGR5O75473 907 aa22.64■■□□□ 1.21
TNFRSF11A-204ENST00000592013 PLEKHA8P1O95397 391 aa22.64■■□□□ 1.21
TNFRSF11A-204ENST00000592013 THPOP40225 353 aa22.64■■□□□ 1.21
TNFRSF11A-204ENST00000592013 RCAN1P53805 252 aa22.64■■□□□ 1.21
TNFRSF11A-204ENST00000592013 FGD1P98174 961 aa22.64■■□□□ 1.21
TNFRSF11A-204ENST00000592013 PPP1R18Q6NYC8 613 aa22.64■■□□□ 1.21
TNFRSF11A-204ENST00000592013 DHX32Q7L7V1 743 aaKnown RBP22.64■■□□□ 1.21
TNFRSF11A-204ENST00000592013 HEATR3Q7Z4Q2 680 aa22.64■■□□□ 1.21
TNFRSF11A-204ENST00000592013 PPM1EQ8WY54 764 aa22.64■■□□□ 1.21
TNFRSF11A-204ENST00000592013 GPR20Q99678 358 aa22.64■■□□□ 1.21
TNFRSF11A-204ENST00000592013 BAZ2BQ9UIF8 2168 aaKnown RBP22.63■■□□□ 1.21
TNFRSF11A-204ENST00000592013 CCDC196A0A1B0GTZ2 297 aa22.63■■□□□ 1.21
TNFRSF11A-204ENST00000592013 ZBTB43O43298 467 aa22.63■■□□□ 1.21
TNFRSF11A-204ENST00000592013 SORBS3O60504 671 aa22.63■■□□□ 1.21
TNFRSF11A-204ENST00000592013 FOSP01100 380 aaPredicted RBP22.63■■□□□ 1.21
TNFRSF11A-204ENST00000592013 SMIM10L2AP0DMW4 78 aa22.63■■□□□ 1.21
TNFRSF11A-204ENST00000592013 SMIM10L2BP0DMW5 78 aa22.63■■□□□ 1.21
TNFRSF11A-204ENST00000592013 POU3F3P20264 500 aaPredicted RBP22.63■■□□□ 1.21
TNFRSF11A-204ENST00000592013 MRPS5P82675 430 aaKnown RBP22.63■■□□□ 1.21
TNFRSF11A-204ENST00000592013 TSGA10IPQ3SY00 556 aa22.63■■□□□ 1.21
TNFRSF11A-204ENST00000592013 ZNF618Q5T7W0 954 aa22.63■■□□□ 1.21
TNFRSF11A-204ENST00000592013 SCN5AQ14524 2016 aa22.63■■□□□ 1.21
TNFRSF11A-204ENST00000592013 CUL9Q8IWT3 2517 aa22.63■■□□□ 1.21
TNFRSF11A-204ENST00000592013 GBF1Q92538 1859 aa22.62■■□□□ 1.21
TNFRSF11A-204ENST00000592013 NRCAMQ92823 1304 aa22.62■■□□□ 1.21
TNFRSF11A-204ENST00000592013 NBNO60934 754 aa22.62■■□□□ 1.21
TNFRSF11A-204ENST00000592013 AMHP03971 560 aa22.62■■□□□ 1.21
TNFRSF11A-204ENST00000592013 MYOGP15173 224 aa22.62■■□□□ 1.21
TNFRSF11A-204ENST00000592013 MTMR1Q13613 665 aa22.62■■□□□ 1.21
TNFRSF11A-204ENST00000592013 APOA5Q6Q788 366 aa22.62■■□□□ 1.21
TNFRSF11A-204ENST00000592013 RSPH3Q86UC2 560 aa22.62■■□□□ 1.21
TNFRSF11A-204ENST00000592013 SEPT8Q92599 483 aa22.62■■□□□ 1.21
TNFRSF11A-204ENST00000592013 RAD9AQ99638 391 aa22.62■■□□□ 1.21
TNFRSF11A-204ENST00000592013 RXRAP19793 462 aa22.61■■□□□ 1.21
TNFRSF11A-204ENST00000592013 HOXC8P31273 242 aa22.61■■□□□ 1.21
TNFRSF11A-204ENST00000592013 ADGRE1Q14246 886 aa22.61■■□□□ 1.21
TNFRSF11A-204ENST00000592013 RTN1Q16799 776 aa22.61■■□□□ 1.21
TNFRSF11A-204ENST00000592013 TRIM71Q2Q1W2 868 aaKnown RBP22.61■■□□□ 1.21
TNFRSF11A-204ENST00000592013 MCTP2Q6DN12 878 aa22.61■■□□□ 1.21
TNFRSF11A-204ENST00000592013 TAF2Q6P1X5 1199 aa22.61■■□□□ 1.21
TNFRSF11A-204ENST00000592013 CCDC82Q8N4S0 544 aa22.61■■□□□ 1.21
TNFRSF11A-204ENST00000592013 APBB2Q92870 758 aa22.61■■□□□ 1.21
TNFRSF11A-204ENST00000592013 ERAP1Q9NZ08 941 aa22.61■■□□□ 1.21
TNFRSF11A-204ENST00000592013 GJB5O95377 273 aa22.6■■□□□ 1.21
TNFRSF11A-204ENST00000592013 TAP1Q03518 808 aa22.6■■□□□ 1.21
TNFRSF11A-204ENST00000592013 USP38Q8NB14 1042 aa22.6■■□□□ 1.21
TNFRSF11A-204ENST00000592013 ARNTL2Q8WYA1 636 aa22.6■■□□□ 1.21
TNFRSF11A-204ENST00000592013 SEPT1Q8WYJ6 367 aa22.6■■□□□ 1.21
TNFRSF11A-204ENST00000592013 GPKOWQ92917 476 aaPredicted RBP eCLIP22.6■■□□□ 1.21
TNFRSF11A-204ENST00000592013 ZFP91Q96JP5 570 aaPredicted RBP22.6■■□□□ 1.21
TNFRSF11A-204ENST00000592013 RNPEPQ9H4A4 650 aa22.6■■□□□ 1.21
TNFRSF11A-204ENST00000592013 INSL6Q9Y581 213 aa22.6■■□□□ 1.21
TNFRSF11A-204ENST00000592013 TRIP12Q14669 1992 aaPredicted RBP22.59■■□□□ 1.21
TNFRSF11A-204ENST00000592013 NAPAP54920 295 aa22.59■■□□□ 1.21
TNFRSF11A-204ENST00000592013 CCDC85BQ15834 202 aaPredicted RBP22.59■■□□□ 1.21
TNFRSF11A-204ENST00000592013 UTP14CQ5TAP6 766 aaKnown RBP22.59■■□□□ 1.21
TNFRSF11A-204ENST00000592013 ASB2Q96Q27 587 aa22.59■■□□□ 1.21
TNFRSF11A-204ENST00000592013 SMARCAD1Q9H4L7 1026 aa22.59■■□□□ 1.21
TNFRSF11A-204ENST00000592013 LMCD1Q9NZU5 365 aa22.59■■□□□ 1.21
TNFRSF11A-204ENST00000592013 PCDHA6Q9UN73 950 aa22.59■■□□□ 1.21
TNFRSF11A-204ENST00000592013 PCDHA8Q9Y5H6 950 aa22.59■■□□□ 1.21
TNFRSF11A-204ENST00000592013 EYSQ5T1H1 3165 aa22.58■■□□□ 1.21
TNFRSF11A-204ENST00000592013 TCF7P36402 384 aaPredicted RBP22.58■■□□□ 1.21
TNFRSF11A-204ENST00000592013 ADCY7P51828 1080 aa22.58■■□□□ 1.21
TNFRSF11A-204ENST00000592013 ARHGAP4P98171 946 aa22.58■■□□□ 1.21
TNFRSF11A-204ENST00000592013 ZNF200P98182 395 aaPredicted RBP22.58■■□□□ 1.21
TNFRSF11A-204ENST00000592013 SP4Q02446 784 aa22.58■■□□□ 1.21
TNFRSF11A-204ENST00000592013 SEMA3FQ13275 785 aa22.58■■□□□ 1.21
TNFRSF11A-204ENST00000592013 AP3B2Q13367 1082 aa22.58■■□□□ 1.21
TNFRSF11A-204ENST00000592013 SKIV2LQ15477 1246 aaKnown RBP22.58■■□□□ 1.21
TNFRSF11A-204ENST00000592013 CMTR1Q8N1G2 835 aaKnown RBP22.58■■□□□ 1.21
TNFRSF11A-204ENST00000592013 MICALL1Q8N3F8 863 aa22.58■■□□□ 1.21
TNFRSF11A-204ENST00000592013 CCDC12Q8WUD4 166 aaPredicted RBP22.58■■□□□ 1.21
TNFRSF11A-204ENST00000592013 GLG1Q92896 1179 aa22.58■■□□□ 1.21
TNFRSF11A-204ENST00000592013 SDF4Q9BRK5 362 aa22.58■■□□□ 1.21
TNFRSF11A-204ENST00000592013 LRRC2Q9BYS8 371 aa22.58■■□□□ 1.21
TNFRSF11A-204ENST00000592013 AZI2Q9H6S1 392 aa22.58■■□□□ 1.21
TNFRSF11A-204ENST00000592013 JADE2Q9NQC1 790 aa22.58■■□□□ 1.21
TNFRSF11A-204ENST00000592013 COG5Q9UP83 839 aa22.58■■□□□ 1.21
TNFRSF11A-204ENST00000592013 UBIAD1Q9Y5Z9 338 aa22.58■■□□□ 1.21
TNFRSF11A-204ENST00000592013 TREHO43280 583 aa22.57■■□□□ 1.2
TNFRSF11A-204ENST00000592013 EXOSC10Q01780 885 aaKnown RBP22.57■■□□□ 1.2
TNFRSF11A-204ENST00000592013 GPNMBQ14956 572 aa22.57■■□□□ 1.2
TNFRSF11A-204ENST00000592013 PLEKHG4Q58EX7 1191 aa22.57■■□□□ 1.2
TNFRSF11A-204ENST00000592013 TGS1Q96RS0 853 aaKnown RBP22.57■■□□□ 1.2
TNFRSF11A-204ENST00000592013 RIC8AQ9NPQ8 531 aa22.57■■□□□ 1.2
TNFRSF11A-204ENST00000592013 CHD9Q3L8U1 2897 aa22.56■■□□□ 1.2
TNFRSF11A-204ENST00000592013 GOLGA8AA7E2F4 631 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms