RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 TCEAL9Q9UHQ7 104 aa11.48□□□□□ -0.57
BRCA1-227ENST00000591849 GRIN2DO15399 1336 aa11.47□□□□□ -0.57
BRCA1-227ENST00000591849 ST18O60284 1047 aa11.47□□□□□ -0.57
BRCA1-227ENST00000591849 B4GALT4O60513 344 aa11.47□□□□□ -0.57
BRCA1-227ENST00000591849 TIMP1P01033 207 aa11.47□□□□□ -0.57
BRCA1-227ENST00000591849 ZNF286BP0CG31 522 aa11.47□□□□□ -0.57
BRCA1-227ENST00000591849 BMP8BP34820 402 aa11.47□□□□□ -0.57
BRCA1-227ENST00000591849 CLK2P49760 499 aaKnown RBP11.47□□□□□ -0.57
BRCA1-227ENST00000591849 FPGSQ05932 587 aa11.47□□□□□ -0.57
BRCA1-227ENST00000591849 PTPN11Q06124 597 aaPredicted RBP11.47□□□□□ -0.57
BRCA1-227ENST00000591849 SEMA3FQ13275 785 aa11.47□□□□□ -0.57
BRCA1-227ENST00000591849 TRIM29Q14134 588 aa11.47□□□□□ -0.57
BRCA1-227ENST00000591849 KIAA0753Q2KHM9 967 aa11.47□□□□□ -0.57
BRCA1-227ENST00000591849 BLIDQ8IZY5 108 aa11.47□□□□□ -0.57
BRCA1-227ENST00000591849 RETREG2Q8NC44 543 aa11.47□□□□□ -0.57
BRCA1-227ENST00000591849 PPP1R13LQ8WUF5 828 aa11.47□□□□□ -0.57
BRCA1-227ENST00000591849 HIPK3Q9H422 1215 aa11.47□□□□□ -0.57
BRCA1-227ENST00000591849 BRMS1Q9HCU9 246 aa11.47□□□□□ -0.57
BRCA1-227ENST00000591849 PCDHA4Q9UN74 947 aa11.47□□□□□ -0.57
BRCA1-227ENST00000591849 STK36Q9NRP7 1315 aa11.46□□□□□ -0.57
BRCA1-227ENST00000591849 ATP9AO75110 1047 aa11.46□□□□□ -0.57
BRCA1-227ENST00000591849 CD4P01730 458 aa11.46□□□□□ -0.57
BRCA1-227ENST00000591849 LGALS2P05162 132 aa11.46□□□□□ -0.57
BRCA1-227ENST00000591849 CYP2C9P11712 490 aa11.46□□□□□ -0.57
BRCA1-227ENST00000591849 CYP2C18P33260 490 aa11.46□□□□□ -0.57
BRCA1-227ENST00000591849 RBM25P49756 843 aaKnown RBP11.46□□□□□ -0.57
BRCA1-227ENST00000591849 FOSBP53539 338 aa11.46□□□□□ -0.57
BRCA1-227ENST00000591849 RABEP1Q15276 862 aa11.46□□□□□ -0.57
BRCA1-227ENST00000591849 PTGISQ16647 500 aa11.46□□□□□ -0.57
BRCA1-227ENST00000591849 FAM177A1Q8N128 213 aaPredicted RBP11.46□□□□□ -0.57
BRCA1-227ENST00000591849 CCDC155Q8N6L0 562 aa11.46□□□□□ -0.57
BRCA1-227ENST00000591849 SEPT1Q8WYJ6 367 aa11.46□□□□□ -0.57
BRCA1-227ENST00000591849 GLG1Q92896 1179 aa11.46□□□□□ -0.57
BRCA1-227ENST00000591849 GTF3C6Q969F1 213 aa11.46□□□□□ -0.57
BRCA1-227ENST00000591849 AIFM3Q96NN9 605 aa11.46□□□□□ -0.57
BRCA1-227ENST00000591849 AZI2Q9H6S1 392 aa11.46□□□□□ -0.57
BRCA1-227ENST00000591849 BCAS3Q9H6U6 928 aa11.46□□□□□ -0.57
BRCA1-227ENST00000591849 KCNH7Q9NS40 1196 aa11.46□□□□□ -0.57
BRCA1-227ENST00000591849 TRMT13Q9NUP7 481 aaKnown RBP11.46□□□□□ -0.57
BRCA1-227ENST00000591849 ZNF215Q9UL58 517 aaPredicted RBP11.46□□□□□ -0.57
BRCA1-227ENST00000591849 KCNJ14Q9UNX9 436 aa11.46□□□□□ -0.57
BRCA1-227ENST00000591849 LCTP09848 1927 aa11.46□□□□□ -0.58
BRCA1-227ENST00000591849 LAMA2P24043 3122 aaKnown RBP11.45□□□□□ -0.58
BRCA1-227ENST00000591849 A0A0C4DFX4 3053 aa11.45□□□□□ -0.58
BRCA1-227ENST00000591849 LTBP2Q14767 1821 aa11.45□□□□□ -0.58
BRCA1-227ENST00000591849 CCDC194A0A1B0GVG4 234 aa11.45□□□□□ -0.58
BRCA1-227ENST00000591849 H3BRB1 525 aa11.45□□□□□ -0.58
BRCA1-227ENST00000591849 MEIS1O00470 390 aa11.45□□□□□ -0.58
BRCA1-227ENST00000591849 DTNBO60941 627 aa11.45□□□□□ -0.58
BRCA1-227ENST00000591849 LARGE1O95461 756 aa11.45□□□□□ -0.58
BRCA1-227ENST00000591849 CYP3A4P08684 503 aa11.45□□□□□ -0.58
BRCA1-227ENST00000591849 ARP10275 920 aa11.45□□□□□ -0.58
BRCA1-227ENST00000591849 KCNA2P16389 499 aa11.45□□□□□ -0.58
BRCA1-227ENST00000591849 TCF7P36402 384 aaPredicted RBP11.45□□□□□ -0.58
BRCA1-227ENST00000591849 CCL23P55773 120 aa11.45□□□□□ -0.58
BRCA1-227ENST00000591849 PPIGQ13427 754 aaKnown RBP eCLIP11.45□□□□□ -0.581e-6■■■□□ 19.2
BRCA1-227ENST00000591849 BFSP2Q13515 415 aa11.45□□□□□ -0.58
BRCA1-227ENST00000591849 PRR16Q569H4 304 aa11.45□□□□□ -0.58
BRCA1-227ENST00000591849 MFSD5Q6N075 450 aa11.45□□□□□ -0.58
BRCA1-227ENST00000591849 GPR153Q6NV75 609 aa11.45□□□□□ -0.58
BRCA1-227ENST00000591849 NIPA1Q7RTP0 329 aa11.45□□□□□ -0.58
BRCA1-227ENST00000591849 CCDC83Q8IWF9 413 aa11.45□□□□□ -0.58
BRCA1-227ENST00000591849 TDHQ8IZJ6 230 aa11.45□□□□□ -0.58
BRCA1-227ENST00000591849 CYP2W1Q8TAV3 490 aa11.45□□□□□ -0.58
BRCA1-227ENST00000591849 KAT2BQ92831 832 aa11.45□□□□□ -0.58
BRCA1-227ENST00000591849 GPR20Q99678 358 aa11.45□□□□□ -0.58
BRCA1-227ENST00000591849 ZNF577Q9BSK1 485 aa11.45□□□□□ -0.58
BRCA1-227ENST00000591849 TUT1Q9H6E5 874 aaKnown RBP11.45□□□□□ -0.58
BRCA1-227ENST00000591849 AGO4Q9HCK5 861 aaKnown RBP11.45□□□□□ -0.58
BRCA1-227ENST00000591849 JPH1Q9HDC5 661 aaPredicted RBP11.45□□□□□ -0.58
BRCA1-227ENST00000591849 SH2B1Q9NRF2 756 aaPredicted RBP11.45□□□□□ -0.58
BRCA1-227ENST00000591849 HDAC6Q9UBN7 1215 aa11.45□□□□□ -0.58
BRCA1-227ENST00000591849 SLC9A2Q9UBY0 812 aa11.45□□□□□ -0.58
BRCA1-227ENST00000591849 TBX21Q9UL17 535 aa11.45□□□□□ -0.58
BRCA1-227ENST00000591849 C17orf102A2RUQ5 167 aa11.44□□□□□ -0.58
BRCA1-227ENST00000591849 DDX39AO00148 427 aaKnown RBP11.44□□□□□ -0.58
BRCA1-227ENST00000591849 MARCH6O60337 910 aa11.44□□□□□ -0.58
BRCA1-227ENST00000591849 CTDNEP1O95476 244 aa11.44□□□□□ -0.58
BRCA1-227ENST00000591849 F2P00734 622 aa11.44□□□□□ -0.58
BRCA1-227ENST00000591849 GNAT1P11488 350 aa11.44□□□□□ -0.58
BRCA1-227ENST00000591849 ITGB8P26012 769 aa11.44□□□□□ -0.58
BRCA1-227ENST00000591849 USP11P51784 963 aa11.44□□□□□ -0.58
BRCA1-227ENST00000591849 SETQ01105 290 aaPredicted RBP11.44□□□□□ -0.58
BRCA1-227ENST00000591849 NONOQ15233 471 aaKnown RBP eCLIP11.44□□□□□ -0.58
BRCA1-227ENST00000591849 KRT25Q7Z3Z0 450 aa11.44□□□□□ -0.58
BRCA1-227ENST00000591849 FAM184AQ8NB25 1140 aa11.44□□□□□ -0.58
BRCA1-227ENST00000591849 DAGLBQ8NCG7 672 aa11.44□□□□□ -0.58
BRCA1-227ENST00000591849 TBCKQ8TEA7 893 aa11.44□□□□□ -0.58
BRCA1-227ENST00000591849 TNPO1Q92973 898 aaKnown RBP11.44□□□□□ -0.58
BRCA1-227ENST00000591849 UIMC1Q96RL1 719 aa11.44□□□□□ -0.58
BRCA1-227ENST00000591849 GTF2IRD1Q9UHL9 959 aa11.44□□□□□ -0.58
BRCA1-227ENST00000591849 LRRC37A2A6NM11 1700 aa11.43□□□□□ -0.58
BRCA1-227ENST00000591849 NFASCO94856 1347 aa11.43□□□□□ -0.58
BRCA1-227ENST00000591849 FAM86B1E9PN63 330 aa11.43□□□□□ -0.58
BRCA1-227ENST00000591849 IPO5O00410 1097 aaKnown RBP11.43□□□□□ -0.58
BRCA1-227ENST00000591849 SOX1O00570 391 aaPredicted RBP11.43□□□□□ -0.58
BRCA1-227ENST00000591849 BACH1O14867 736 aa11.43□□□□□ -0.58
BRCA1-227ENST00000591849 ADAMTS3O15072 1205 aa11.43□□□□□ -0.58
BRCA1-227ENST00000591849 JAK2O60674 1132 aa11.43□□□□□ -0.58
BRCA1-227ENST00000591849 FAM86B2P0C5J1 330 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms