RNA–Protein interactions for RNA: ENST00000590445.5

GCDH-210, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 4

Gene GCDH, Length 496 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-210ENST00000590445 LRCH3Q96II8 777 aa18.35■□□□□ 0.53
GCDH-210ENST00000590445 CDHR1Q96JP9 859 aa18.35■□□□□ 0.53
GCDH-210ENST00000590445 NOC4LQ9BVI4 516 aaKnown RBP18.35■□□□□ 0.53
GCDH-210ENST00000590445 TRMT13Q9NUP7 481 aaKnown RBP18.35■□□□□ 0.53
GCDH-210ENST00000590445 VPS54Q9P1Q0 977 aa18.35■□□□□ 0.53
GCDH-210ENST00000590445 PCDHA6Q9UN73 950 aa18.35■□□□□ 0.53
GCDH-210ENST00000590445 PCDHA8Q9Y5H6 950 aa18.35■□□□□ 0.53
GCDH-210ENST00000590445 CYP2C18P33260 490 aa18.34■□□□□ 0.53
GCDH-210ENST00000590445 EPHB4P54760 987 aa18.34■□□□□ 0.53
GCDH-210ENST00000590445 CHMP4BP1P59074 171 aa18.34■□□□□ 0.53
GCDH-210ENST00000590445 HMGN5P82970 282 aaKnown RBP18.34■□□□□ 0.53
GCDH-210ENST00000590445 METTL7BQ6UX53 244 aa18.34■□□□□ 0.53
GCDH-210ENST00000590445 SESTD1Q86VW0 696 aa18.34■□□□□ 0.53
GCDH-210ENST00000590445 REXO1Q8N1G1 1221 aaKnown RBP18.34■□□□□ 0.53
GCDH-210ENST00000590445 KAT2BQ92831 832 aa18.34■□□□□ 0.53
GCDH-210ENST00000590445 GPRASP2Q96D09 838 aa18.34■□□□□ 0.53
GCDH-210ENST00000590445 SENP7Q9BQF6 1050 aa18.34■□□□□ 0.53
GCDH-210ENST00000590445 NOP56O00567 594 aaKnown RBP18.33■□□□□ 0.52
GCDH-210ENST00000590445 SORBS3O60504 671 aa18.33■□□□□ 0.52
GCDH-210ENST00000590445 F2P00734 622 aa18.33■□□□□ 0.52
GCDH-210ENST00000590445 FDPSP14324 419 aaKnown RBP18.33■□□□□ 0.52
GCDH-210ENST00000590445 CSF2RAP15509 400 aa18.33■□□□□ 0.52
GCDH-210ENST00000590445 PSEN2P49810 448 aa18.33■□□□□ 0.52
GCDH-210ENST00000590445 ST3GAL1Q11201 340 aa18.33■□□□□ 0.52
GCDH-210ENST00000590445 SEMA3FQ13275 785 aa18.33■□□□□ 0.52
GCDH-210ENST00000590445 HSDL1Q3SXM5 330 aa18.33■□□□□ 0.52
GCDH-210ENST00000590445 GIMAP8Q8ND71 665 aaPredicted RBP18.33■□□□□ 0.52
GCDH-210ENST00000590445 RNPC3Q96LT9 517 aaKnown RBP18.33■□□□□ 0.52
GCDH-210ENST00000590445 ALG1Q9BT22 464 aa18.33■□□□□ 0.52
GCDH-210ENST00000590445 PCDHA4Q9UN74 947 aa18.33■□□□□ 0.52
GCDH-210ENST00000590445 NOD1Q9Y239 953 aa18.33■□□□□ 0.52
GCDH-210ENST00000590445 CYP2C9P11712 490 aa18.32■□□□□ 0.52
GCDH-210ENST00000590445 MFSD10Q14728 455 aa18.32■□□□□ 0.52
GCDH-210ENST00000590445 DAGLBQ8NCG7 672 aa18.32■□□□□ 0.52
GCDH-210ENST00000590445 TMX3Q96JJ7 454 aa18.32■□□□□ 0.52
GCDH-210ENST00000590445 ANO3Q9BYT9 981 aa18.32■□□□□ 0.52
GCDH-210ENST00000590445 UBIAD1Q9Y5Z9 338 aa18.32■□□□□ 0.52
GCDH-210ENST00000590445 LAMA3Q16787 3333 aa18.32■□□□□ 0.52
GCDH-210ENST00000590445 UMODL1Q5DID0 1318 aa18.31■□□□□ 0.52
GCDH-210ENST00000590445 HAS3O00219 553 aa18.31■□□□□ 0.52
GCDH-210ENST00000590445 MAFGO15525 162 aa18.31■□□□□ 0.52
GCDH-210ENST00000590445 JAK2O60674 1132 aa18.31■□□□□ 0.52
GCDH-210ENST00000590445 CD2BP2O95400 341 aaKnown RBP18.31■□□□□ 0.52
GCDH-210ENST00000590445 ZNF286BP0CG31 522 aa18.31■□□□□ 0.52
GCDH-210ENST00000590445 ITGB5P18084 799 aa18.31■□□□□ 0.52
GCDH-210ENST00000590445 BFSP2Q13515 415 aa18.31■□□□□ 0.52
GCDH-210ENST00000590445 PTGISQ16647 500 aa18.31■□□□□ 0.52
GCDH-210ENST00000590445 KIAA0753Q2KHM9 967 aa18.31■□□□□ 0.52
GCDH-210ENST00000590445 PSRC1Q6PGN9 363 aaPredicted RBP18.31■□□□□ 0.52
GCDH-210ENST00000590445 CYFIP1Q7L576 1253 aa18.31■□□□□ 0.52
GCDH-210ENST00000590445 C7orf31Q8N865 590 aa18.31■□□□□ 0.52
GCDH-210ENST00000590445 PPP1R13LQ8WUF5 828 aa18.31■□□□□ 0.52
GCDH-210ENST00000590445 AIFM3Q96NN9 605 aa18.31■□□□□ 0.52
GCDH-210ENST00000590445 IL23AQ9NPF7 189 aa18.31■□□□□ 0.52
GCDH-210ENST00000590445 SREBF1P36956 1147 aa18.3■□□□□ 0.52
GCDH-210ENST00000590445 CCL23P55773 120 aa18.3■□□□□ 0.52
GCDH-210ENST00000590445 MTMR1Q13613 665 aa18.3■□□□□ 0.52
GCDH-210ENST00000590445 TRIM29Q14134 588 aa18.3■□□□□ 0.52
GCDH-210ENST00000590445 JAKMIP3Q5VZ66 844 aa18.3■□□□□ 0.52
GCDH-210ENST00000590445 RPUSD2Q8IZ73 545 aaKnown RBP18.3■□□□□ 0.52
GCDH-210ENST00000590445 BLIDQ8IZY5 108 aa18.3■□□□□ 0.52
GCDH-210ENST00000590445 CCDC155Q8N6L0 562 aa18.3■□□□□ 0.52
GCDH-210ENST00000590445 RETREG2Q8NC44 543 aa18.3■□□□□ 0.52
GCDH-210ENST00000590445 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.3■□□□□ 0.529e-7■□□□□ 10.7
GCDH-210ENST00000590445 PHF20Q9BVI0 1012 aa18.3■□□□□ 0.52
GCDH-210ENST00000590445 WNT8AQ9H1J5 351 aa18.3■□□□□ 0.52
GCDH-210ENST00000590445 JADE2Q9NQC1 790 aa18.3■□□□□ 0.52
GCDH-210ENST00000590445 GTF2IRD1Q9UHL9 959 aa18.3■□□□□ 0.52
GCDH-210ENST00000590445 KIF3AQ9Y496 699 aa18.3■□□□□ 0.52
GCDH-210ENST00000590445 PITPNM1O00562 1244 aa18.29■□□□□ 0.52
GCDH-210ENST00000590445 LGALS2P05162 132 aa18.29■□□□□ 0.52
GCDH-210ENST00000590445 SMAD3P84022 425 aaKnown RBP18.29■□□□□ 0.52
GCDH-210ENST00000590445 TMEM240Q5SV17 173 aa18.29■□□□□ 0.52
GCDH-210ENST00000590445 GDF6Q6KF10 455 aaPredicted RBP18.29■□□□□ 0.52
GCDH-210ENST00000590445 C16orf59Q7L2K0 433 aa18.29■□□□□ 0.52
GCDH-210ENST00000590445 FAM184AQ8NB25 1140 aa18.29■□□□□ 0.52
GCDH-210ENST00000590445 GPR20Q99678 358 aa18.29■□□□□ 0.52
GCDH-210ENST00000590445 MXRA8Q9BRK3 442 aa18.29■□□□□ 0.52
GCDH-210ENST00000590445 C16orf70Q9BSU1 422 aa18.29■□□□□ 0.52
GCDH-210ENST00000590445 MTIF3Q9H2K0 278 aaKnown RBP18.29■□□□□ 0.52
GCDH-210ENST00000590445 BCAS3Q9H6U6 928 aa18.29■□□□□ 0.52
GCDH-210ENST00000590445 BRMS1Q9HCU9 246 aa18.29■□□□□ 0.52
GCDH-210ENST00000590445 TMEM260Q9NX78 707 aa18.29■□□□□ 0.52
GCDH-210ENST00000590445 HDAC6Q9UBN7 1215 aa18.29■□□□□ 0.52
GCDH-210ENST00000590445 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.29■□□□□ 0.52
GCDH-210ENST00000590445 H3BRB1 525 aa18.28■□□□□ 0.52
GCDH-210ENST00000590445 ACRP10323 421 aa18.28■□□□□ 0.52
GCDH-210ENST00000590445 KCNA2P16389 499 aa18.28■□□□□ 0.52
GCDH-210ENST00000590445 FAM109BQ6ICB4 259 aaPredicted RBP18.28■□□□□ 0.52
GCDH-210ENST00000590445 ZNF365Q70YC5 407 aa18.28■□□□□ 0.52
GCDH-210ENST00000590445 CAGE1Q8TC20 777 aa18.28■□□□□ 0.52
GCDH-210ENST00000590445 PGBD1Q96JS3 809 aa18.28■□□□□ 0.52
GCDH-210ENST00000590445 TUT1Q9H6E5 874 aaKnown RBP18.28■□□□□ 0.52
GCDH-210ENST00000590445 KCNJ14Q9UNX9 436 aa18.28■□□□□ 0.52
GCDH-210ENST00000590445 ATP9AO75110 1047 aa18.27■□□□□ 0.52
GCDH-210ENST00000590445 FGBP02675 491 aa18.27■□□□□ 0.52
GCDH-210ENST00000590445 PFKMP08237 780 aa18.27■□□□□ 0.52
GCDH-210ENST00000590445 CYP3A4P08684 503 aa18.27■□□□□ 0.52
GCDH-210ENST00000590445 RFC2P35250 354 aa18.27■□□□□ 0.52
GCDH-210ENST00000590445 ARHGAP4P98171 946 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms