RNA–Protein interactions for RNA: ENST00000590275.1

LRP3-202, Transcript of LDL receptor related protein 3, humanhuman

TSL 2

Gene LRP3, Length 1,078 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-202ENST00000590275 RNPC3Q96LT9 517 aaKnown RBP24.47■■□□□ 1.51
LRP3-202ENST00000590275 SENP7Q9BQF6 1050 aa24.47■■□□□ 1.51
LRP3-202ENST00000590275 ZMYND12Q9H0C1 365 aa24.47■■□□□ 1.51
LRP3-202ENST00000590275 JADE2Q9NQC1 790 aa24.47■■□□□ 1.51
LRP3-202ENST00000590275 PKD2L1Q9P0L9 805 aa24.47■■□□□ 1.51
LRP3-202ENST00000590275 GTF2IRD1Q9UHL9 959 aa24.47■■□□□ 1.51
LRP3-202ENST00000590275 LGALS2P05162 132 aa24.46■■□□□ 1.51
LRP3-202ENST00000590275 SP4Q02446 784 aa24.46■■□□□ 1.51
LRP3-202ENST00000590275 PPIGQ13427 754 aaKnown RBP eCLIP24.46■■□□□ 1.511e-9■□□□□ 10.8
LRP3-202ENST00000590275 NEDD9Q14511 834 aa24.46■■□□□ 1.51
LRP3-202ENST00000590275 GPNMBQ14956 572 aa24.46■■□□□ 1.51
LRP3-202ENST00000590275 RASGRP4Q8TDF6 673 aa24.46■■□□□ 1.51
LRP3-202ENST00000590275 AIFM3Q96NN9 605 aa24.46■■□□□ 1.51
LRP3-202ENST00000590275 RNF26Q9BY78 433 aaPredicted RBP24.46■■□□□ 1.51
LRP3-202ENST00000590275 IL23AQ9NPF7 189 aa24.46■■□□□ 1.51
LRP3-202ENST00000590275 CXXC1Q9P0U4 656 aaPredicted RBP24.46■■□□□ 1.51
LRP3-202ENST00000590275 TPCN1Q9ULQ1 816 aa24.46■■□□□ 1.51
LRP3-202ENST00000590275 SUPT20HL2P0C7V6 817 aa24.45■■□□□ 1.5
LRP3-202ENST00000590275 ARP10275 920 aa24.45■■□□□ 1.5
LRP3-202ENST00000590275 PTGISQ16647 500 aa24.45■■□□□ 1.5
LRP3-202ENST00000590275 NLRX1Q86UT6 975 aa24.45■■□□□ 1.5
LRP3-202ENST00000590275 MXRA8Q9BRK3 442 aa24.45■■□□□ 1.5
LRP3-202ENST00000590275 VPS54Q9P1Q0 977 aa24.45■■□□□ 1.5
LRP3-202ENST00000590275 ESYT2A0FGR8 921 aa24.44■■□□□ 1.5
LRP3-202ENST00000590275 SREBF1P36956 1147 aa24.44■■□□□ 1.5
LRP3-202ENST00000590275 SCRN1Q12765 414 aa24.44■■□□□ 1.5
LRP3-202ENST00000590275 MTMR1Q13613 665 aa24.44■■□□□ 1.5
LRP3-202ENST00000590275 MYH7BA7E2Y1 1941 aa24.43■■□□□ 1.5
LRP3-202ENST00000590275 DOCK5Q9H7D0 1870 aa24.43■■□□□ 1.5
LRP3-202ENST00000590275 CDH23Q9H251 3354 aa24.43■■□□□ 1.5
LRP3-202ENST00000590275 GSTTP1A0A1W2PQM5 241 aa24.43■■□□□ 1.5
LRP3-202ENST00000590275 GRXCR1A8MXD5 290 aa24.43■■□□□ 1.5
LRP3-202ENST00000590275 HOXC8P31273 242 aa24.43■■□□□ 1.5
LRP3-202ENST00000590275 AK2P54819 239 aa24.43■■□□□ 1.5
LRP3-202ENST00000590275 ANAPC15P60006 121 aa24.43■■□□□ 1.5
LRP3-202ENST00000590275 TRIM71Q2Q1W2 868 aaKnown RBP24.43■■□□□ 1.5
LRP3-202ENST00000590275 C8orf34Q49A92 452 aa24.43■■□□□ 1.5
LRP3-202ENST00000590275 GPR153Q6NV75 609 aa24.43■■□□□ 1.5
LRP3-202ENST00000590275 KCNH7Q9NS40 1196 aa24.43■■□□□ 1.5
LRP3-202ENST00000590275 COL6A3P12111 3177 aa24.43■■□□□ 1.5
LRP3-202ENST00000590275 FAM86B1E9PN63 330 aa24.42■■□□□ 1.5
LRP3-202ENST00000590275 H3BRB1 525 aa24.42■■□□□ 1.5
LRP3-202ENST00000590275 LARGE1O95461 756 aa24.42■■□□□ 1.5
LRP3-202ENST00000590275 FOSP01100 380 aaPredicted RBP24.42■■□□□ 1.5
LRP3-202ENST00000590275 FAM86B2P0C5J1 330 aa24.42■■□□□ 1.5
LRP3-202ENST00000590275 ARHGAP4P98171 946 aa24.42■■□□□ 1.5
LRP3-202ENST00000590275 ITGB3BPQ13352 177 aaPredicted RBP24.42■■□□□ 1.5
LRP3-202ENST00000590275 AP3B2Q13367 1082 aa24.42■■□□□ 1.5
LRP3-202ENST00000590275 UTP14CQ5TAP6 766 aaKnown RBP24.42■■□□□ 1.5
LRP3-202ENST00000590275 TRAF7Q6Q0C0 670 aa24.42■■□□□ 1.5
LRP3-202ENST00000590275 DEFB123Q8N688 67 aa24.42■■□□□ 1.5
LRP3-202ENST00000590275 C7orf31Q8N865 590 aa24.42■■□□□ 1.5
LRP3-202ENST00000590275 UIMC1Q96RL1 719 aa24.42■■□□□ 1.5
LRP3-202ENST00000590275 KATNAL1Q9BW62 490 aa24.42■■□□□ 1.5
LRP3-202ENST00000590275 TUT1Q9H6E5 874 aaKnown RBP24.42■■□□□ 1.5
LRP3-202ENST00000590275 MEIS1O00470 390 aa24.41■■□□□ 1.5
LRP3-202ENST00000590275 NOP56O00567 594 aaKnown RBP24.41■■□□□ 1.5
LRP3-202ENST00000590275 CTDNEP1O95476 244 aa24.41■■□□□ 1.5
LRP3-202ENST00000590275 IQCF3P0C7M6 154 aa24.41■■□□□ 1.5
LRP3-202ENST00000590275 NPY5RQ15761 445 aa24.41■■□□□ 1.5
LRP3-202ENST00000590275 PCYT2Q99447 389 aa24.41■■□□□ 1.5
LRP3-202ENST00000590275 IGLV3-22A0A075B6J6 115 aa24.4■■□□□ 1.5
LRP3-202ENST00000590275 PITPNM1O00562 1244 aa24.4■■□□□ 1.5
LRP3-202ENST00000590275 SMIM10L2AP0DMW4 78 aa24.4■■□□□ 1.5
LRP3-202ENST00000590275 SMIM10L2BP0DMW5 78 aa24.4■■□□□ 1.5
LRP3-202ENST00000590275 TCTN1Q2MV58 587 aa24.4■■□□□ 1.5
LRP3-202ENST00000590275 CEP55Q53EZ4 464 aa24.4■■□□□ 1.5
LRP3-202ENST00000590275 OTOP2Q7RTS6 562 aa24.4■■□□□ 1.5
LRP3-202ENST00000590275 DEFB128Q7Z7B8 93 aa24.4■■□□□ 1.5
LRP3-202ENST00000590275 TEX2Q8IWB9 1127 aa24.4■■□□□ 1.5
LRP3-202ENST00000590275 HERVK_113Q902F9 699 aa24.4■■□□□ 1.5
LRP3-202ENST00000590275 RNPEPQ9H4A4 650 aa24.4■■□□□ 1.5
LRP3-202ENST00000590275 AGO4Q9HCK5 861 aaKnown RBP24.4■■□□□ 1.5
LRP3-202ENST00000590275 MTMR10Q9NXD2 777 aa24.4■■□□□ 1.5
LRP3-202ENST00000590275 TCF7P36402 384 aaPredicted RBP24.39■■□□□ 1.49
LRP3-202ENST00000590275 SMAD3P84022 425 aaKnown RBP24.39■■□□□ 1.49
LRP3-202ENST00000590275 PSRC1Q6PGN9 363 aaPredicted RBP24.39■■□□□ 1.49
LRP3-202ENST00000590275 FAM161BQ96MY7 647 aa24.39■■□□□ 1.49
LRP3-202ENST00000590275 TTYH1Q9H313 450 aaPredicted RBP24.39■■□□□ 1.49
LRP3-202ENST00000590275 C6orf50Q9HD87 102 aa24.39■■□□□ 1.49
LRP3-202ENST00000590275 PFKFB2O60825 505 aa24.38■■□□□ 1.49
LRP3-202ENST00000590275 FGBP02675 491 aa24.38■■□□□ 1.49
LRP3-202ENST00000590275 CYP3A4P08684 503 aa24.38■■□□□ 1.49
LRP3-202ENST00000590275 CKBP12277 381 aa24.38■■□□□ 1.49
LRP3-202ENST00000590275 PBX2P40425 430 aa24.38■■□□□ 1.49
LRP3-202ENST00000590275 AKAP17AQ02040 695 aaKnown RBP24.38■■□□□ 1.49
LRP3-202ENST00000590275 SSRP1Q08945 709 aaKnown RBP24.38■■□□□ 1.49
LRP3-202ENST00000590275 RBL2Q08999 1139 aa24.38■■□□□ 1.49
LRP3-202ENST00000590275 MBTPS1Q14703 1052 aa24.38■■□□□ 1.49
LRP3-202ENST00000590275 REXO1Q8N1G1 1221 aaKnown RBP24.38■■□□□ 1.49
LRP3-202ENST00000590275 CDHR1Q96JP9 859 aa24.38■■□□□ 1.49
LRP3-202ENST00000590275 OSBPL7Q9BZF2 842 aa24.38■■□□□ 1.49
LRP3-202ENST00000590275 GLT8D2Q9H1C3 349 aa24.38■■□□□ 1.49
LRP3-202ENST00000590275 EHMT1Q9H9B1 1298 aa24.38■■□□□ 1.49
LRP3-202ENST00000590275 GJB4Q9NTQ9 266 aa24.38■■□□□ 1.49
LRP3-202ENST00000590275 NOD1Q9Y239 953 aa24.38■■□□□ 1.49
LRP3-202ENST00000590275 MAFGO15525 162 aa24.37■■□□□ 1.49
LRP3-202ENST00000590275 TREHO43280 583 aa24.37■■□□□ 1.49
LRP3-202ENST00000590275 ADAM17P78536 824 aa24.37■■□□□ 1.49
LRP3-202ENST00000590275 ST3GAL1Q11201 340 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms