RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 LRRC26Q2I0M4 334 aa24.21■■□□□ 1.47
ATG4D-212ENST00000590096 PRR16Q569H4 304 aa24.21■■□□□ 1.47
ATG4D-212ENST00000590096 FBXO18Q8NFZ0 1043 aa24.21■■□□□ 1.47
ATG4D-212ENST00000590096 SNX21Q969T3 373 aa24.21■■□□□ 1.47
ATG4D-212ENST00000590096 SDF4Q9BRK5 362 aa24.21■■□□□ 1.47
ATG4D-212ENST00000590096 MTG1Q9BT17 334 aaPredicted RBP24.21■■□□□ 1.47
ATG4D-212ENST00000590096 IGLV3-22A0A075B6J6 115 aa24.2■■□□□ 1.46
ATG4D-212ENST00000590096 A0A0U1RQG5 324 aaPredicted RBP24.2■■□□□ 1.46
ATG4D-212ENST00000590096 BTBD18B2RXH4 712 aa24.2■■□□□ 1.46
ATG4D-212ENST00000590096 EVI5O60447 810 aa24.2■■□□□ 1.46
ATG4D-212ENST00000590096 CUL4AQ13619 759 aa24.2■■□□□ 1.46
ATG4D-212ENST00000590096 HSDL1Q3SXM5 330 aa24.2■■□□□ 1.46
ATG4D-212ENST00000590096 HSCBQ8IWL3 235 aa24.2■■□□□ 1.46
ATG4D-212ENST00000590096 BCAS3Q9H6U6 928 aa24.2■■□□□ 1.46
ATG4D-212ENST00000590096 AGO4Q9HCK5 861 aaKnown RBP24.2■■□□□ 1.46
ATG4D-212ENST00000590096 CEP290O15078 2479 aa24.2■■□□□ 1.46
ATG4D-212ENST00000590096 ALPK3Q96L96 1907 aa24.2■■□□□ 1.46
ATG4D-212ENST00000590096 RTP1P59025 263 aa24.19■■□□□ 1.46
ATG4D-212ENST00000590096 SP4Q02446 784 aa24.19■■□□□ 1.46
ATG4D-212ENST00000590096 GNL2Q13823 731 aaKnown RBP24.19■■□□□ 1.46
ATG4D-212ENST00000590096 SNX17Q15036 470 aa24.19■■□□□ 1.46
ATG4D-212ENST00000590096 C1orf53Q5VUE5 145 aa24.19■■□□□ 1.46
ATG4D-212ENST00000590096 NEK8Q86SG6 692 aa24.19■■□□□ 1.46
ATG4D-212ENST00000590096 ATP11BQ9Y2G3 1177 aa24.19■■□□□ 1.46
ATG4D-212ENST00000590096 NFASCO94856 1347 aa24.18■■□□□ 1.46
ATG4D-212ENST00000590096 PPFIA4O75335 1185 aa24.18■■□□□ 1.46
ATG4D-212ENST00000590096 LETM2Q2VYF4 491 aa24.18■■□□□ 1.46
ATG4D-212ENST00000590096 MOXD1Q6UVY6 613 aa24.18■■□□□ 1.46
ATG4D-212ENST00000590096 TNFRSF25Q93038 417 aa24.18■■□□□ 1.46
ATG4D-212ENST00000590096 NAP1L4Q99733 375 aaKnown RBP24.18■■□□□ 1.46
ATG4D-212ENST00000590096 ZNF577Q9BSK1 485 aa24.18■■□□□ 1.46
ATG4D-212ENST00000590096 JPH1Q9HDC5 661 aaPredicted RBP24.18■■□□□ 1.46
ATG4D-212ENST00000590096 PCDH10Q9P2E7 1040 aa24.18■■□□□ 1.46
ATG4D-212ENST00000590096 HOXD8P13378 290 aaPredicted RBP24.17■■□□□ 1.46
ATG4D-212ENST00000590096 PSMC6P62333 389 aa24.17■■□□□ 1.46
ATG4D-212ENST00000590096 TRIM60Q495X7 471 aa24.17■■□□□ 1.46
ATG4D-212ENST00000590096 C7orf61Q8IZ16 206 aa24.17■■□□□ 1.46
ATG4D-212ENST00000590096 GPR20Q99678 358 aa24.17■■□□□ 1.46
ATG4D-212ENST00000590096 SEZ6LQ9BYH1 1024 aa24.17■■□□□ 1.46
ATG4D-212ENST00000590096 SLC9A2Q9UBY0 812 aa24.17■■□□□ 1.46
ATG4D-212ENST00000590096 NR2E3Q9Y5X4 410 aa24.17■■□□□ 1.46
ATG4D-212ENST00000590096 MROH7Q68CQ1 1323 aa24.16■■□□□ 1.46
ATG4D-212ENST00000590096 CYP3A7-CYP3A51PA0A087WV96 503 aa24.16■■□□□ 1.46
ATG4D-212ENST00000590096 H3BQV1 296 aa24.16■■□□□ 1.46
ATG4D-212ENST00000590096 ARVCFO00192 962 aa24.16■■□□□ 1.46
ATG4D-212ENST00000590096 IPO5O00410 1097 aaKnown RBP24.16■■□□□ 1.46
ATG4D-212ENST00000590096 EDIL3O43854 480 aa24.16■■□□□ 1.46
ATG4D-212ENST00000590096 TDP2O95551 362 aa24.16■■□□□ 1.46
ATG4D-212ENST00000590096 CYP3A7P24462 503 aa24.16■■□□□ 1.46
ATG4D-212ENST00000590096 ITGB3BPQ13352 177 aaPredicted RBP24.16■■□□□ 1.46
ATG4D-212ENST00000590096 ITGA7Q13683 1181 aa24.16■■□□□ 1.46
ATG4D-212ENST00000590096 Q4G0T1 1027 aa24.16■■□□□ 1.46
ATG4D-212ENST00000590096 EARS2Q5JPH6 523 aaKnown RBP24.16■■□□□ 1.46
ATG4D-212ENST00000590096 KATNAL1Q9BW62 490 aa24.16■■□□□ 1.46
ATG4D-212ENST00000590096 FOXP1Q9H334 677 aaPredicted RBP24.16■■□□□ 1.46
ATG4D-212ENST00000590096 TBC1D22BQ9NU19 505 aa24.16■■□□□ 1.46
ATG4D-212ENST00000590096 TCEAL9Q9UHQ7 104 aa24.16■■□□□ 1.46
ATG4D-212ENST00000590096 FAM205CA6NFA0 338 aa24.15■■□□□ 1.46
ATG4D-212ENST00000590096 ZNF286BP0CG31 522 aa24.15■■□□□ 1.46
ATG4D-212ENST00000590096 GCFC2P16383 781 aaKnown RBP24.15■■□□□ 1.46
ATG4D-212ENST00000590096 CHMP4BP1P59074 171 aa24.15■■□□□ 1.46
ATG4D-212ENST00000590096 LENG9Q96B70 501 aa24.15■■□□□ 1.46
ATG4D-212ENST00000590096 INTS4Q96HW7 963 aaKnown RBP24.15■■□□□ 1.46
ATG4D-212ENST00000590096 DDX25Q9UHL0 483 aaKnown RBP24.15■■□□□ 1.46
ATG4D-212ENST00000590096 SCN10AQ9Y5Y9 1956 aa24.14■■□□□ 1.46
ATG4D-212ENST00000590096 DDX39AO00148 427 aaKnown RBP24.14■■□□□ 1.45
ATG4D-212ENST00000590096 CCNT1O60563 726 aaKnown RBP24.14■■□□□ 1.45
ATG4D-212ENST00000590096 PQBP1O60828 265 aaKnown RBP24.14■■□□□ 1.45
ATG4D-212ENST00000590096 SEPT1Q8WYJ6 367 aa24.14■■□□□ 1.45
ATG4D-212ENST00000590096 UIMC1Q96RL1 719 aa24.14■■□□□ 1.45
ATG4D-212ENST00000590096 DCDC2CA8MYV0 355 aa24.13■■□□□ 1.45
ATG4D-212ENST00000590096 MSH4O15457 936 aa24.13■■□□□ 1.45
ATG4D-212ENST00000590096 F2P00734 622 aa24.13■■□□□ 1.45
ATG4D-212ENST00000590096 LGALS2P05162 132 aa24.13■■□□□ 1.45
ATG4D-212ENST00000590096 TCF7P36402 384 aaPredicted RBP24.13■■□□□ 1.45
ATG4D-212ENST00000590096 CDK7P50613 346 aa24.13■■□□□ 1.45
ATG4D-212ENST00000590096 TLE2Q04725 743 aa24.13■■□□□ 1.45
ATG4D-212ENST00000590096 NBPF20Q3BBV1 942 aa24.13■■□□□ 1.45
ATG4D-212ENST00000590096 UTP14CQ5TAP6 766 aaKnown RBP24.13■■□□□ 1.45
ATG4D-212ENST00000590096 LARP1BQ659C4 914 aaKnown RBP24.13■■□□□ 1.45
ATG4D-212ENST00000590096 PPP4R3AQ6IN85 833 aa24.13■■□□□ 1.45
ATG4D-212ENST00000590096 KAT2BQ92831 832 aa24.13■■□□□ 1.45
ATG4D-212ENST00000590096 MBOAT7Q96N66 472 aa24.13■■□□□ 1.45
ATG4D-212ENST00000590096 PSEN2P49810 448 aa24.12■■□□□ 1.45
ATG4D-212ENST00000590096 FAM47CQ5HY64 1035 aa24.12■■□□□ 1.45
ATG4D-212ENST00000590096 MCTP1Q6DN14 999 aa24.12■■□□□ 1.45
ATG4D-212ENST00000590096 ANKRD33Q7Z3H0 272 aa24.12■■□□□ 1.45
ATG4D-212ENST00000590096 SLC43A3Q8NBI5 491 aa24.12■■□□□ 1.45
ATG4D-212ENST00000590096 TOX2Q96NM4 488 aa24.12■■□□□ 1.45
ATG4D-212ENST00000590096 ZNF215Q9UL58 517 aaPredicted RBP24.12■■□□□ 1.45
ATG4D-212ENST00000590096 TELO2Q9Y4R8 837 aa24.12■■□□□ 1.45
ATG4D-212ENST00000590096 GRIN2DO15399 1336 aa24.11■■□□□ 1.45
ATG4D-212ENST00000590096 TLR3O15455 904 aaKnown RBP24.11■■□□□ 1.45
ATG4D-212ENST00000590096 DHX15O43143 795 aaKnown RBP24.11■■□□□ 1.45
ATG4D-212ENST00000590096 ACTR2P61160 394 aa24.11■■□□□ 1.45
ATG4D-212ENST00000590096 MFSD10Q14728 455 aa24.11■■□□□ 1.45
ATG4D-212ENST00000590096 KIAA0753Q2KHM9 967 aa24.11■■□□□ 1.45
ATG4D-212ENST00000590096 NFRKBQ6P4R8 1299 aa24.11■■□□□ 1.45
ATG4D-212ENST00000590096 NOSTRINQ8IVI9 506 aa24.11■■□□□ 1.45
ATG4D-212ENST00000590096 C16orf70Q9BSU1 422 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms