RNA–Protein interactions for RNA: ENST00000589285.1

ZNF540-207, Transcript of zinc finger protein 540, humanhuman

Gene ZNF540, Length 3,106 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-207ENST00000589285 CCDC7Q96M83 1385 aa4.33□□□□□ -1.72
ZNF540-207ENST00000589285 KIF1BO60333 1816 aa4.33□□□□□ -1.72
ZNF540-207ENST00000589285 ADGRB3O60242 1522 aa4.33□□□□□ -1.72
ZNF540-207ENST00000589285 GDNFP39905 211 aa4.32□□□□□ -1.72
ZNF540-207ENST00000589285 SQSTM1Q13501 440 aa4.32□□□□□ -1.72
ZNF540-207ENST00000589285 RRS1Q15050 365 aaKnown RBP4.32□□□□□ -1.72
ZNF540-207ENST00000589285 COX4I2Q96KJ9 171 aa4.32□□□□□ -1.72
ZNF540-207ENST00000589285 DCCP43146 1447 aa4.32□□□□□ -1.72
ZNF540-207ENST00000589285 YTHDC2Q9H6S0 1430 aaKnown RBP4.32□□□□□ -1.72
ZNF540-207ENST00000589285 NHSL1Q5SYE7 1610 aa4.32□□□□□ -1.72
ZNF540-207ENST00000589285 CHD2O14647 1828 aaKnown RBP4.32□□□□□ -1.72
ZNF540-207ENST00000589285 COL6A2P12110 1019 aa4.32□□□□□ -1.72
ZNF540-207ENST00000589285 ATF3P18847 181 aa4.32□□□□□ -1.72
ZNF540-207ENST00000589285 EPHB3P54753 998 aa4.32□□□□□ -1.72
ZNF540-207ENST00000589285 VMACQ2NL98 169 aa4.32□□□□□ -1.72
ZNF540-207ENST00000589285 NME9Q86XW9 330 aa4.32□□□□□ -1.72
ZNF540-207ENST00000589285 ADGRG2Q8IZP9 1017 aa4.32□□□□□ -1.72
ZNF540-207ENST00000589285 USP33Q8TEY7 942 aa4.32□□□□□ -1.72
ZNF540-207ENST00000589285 TAF6LQ9Y6J9 622 aa4.32□□□□□ -1.72
ZNF540-207ENST00000589285 XRN1Q8IZH2 1706 aaKnown RBP4.32□□□□□ -1.72
ZNF540-207ENST00000589285 PIK3R4Q99570 1358 aa4.32□□□□□ -1.72
ZNF540-207ENST00000589285 ZC3H12DA2A288 527 aaKnown RBP4.32□□□□□ -1.72
ZNF540-207ENST00000589285 HPXP02790 462 aa4.32□□□□□ -1.72
ZNF540-207ENST00000589285 BICRALQ6AI39 1079 aa4.32□□□□□ -1.72
ZNF540-207ENST00000589285 RNF111Q6ZNA4 994 aa4.32□□□□□ -1.72
ZNF540-207ENST00000589285 CEP68Q76N32 757 aa4.32□□□□□ -1.72
ZNF540-207ENST00000589285 CCDC146Q8IYE0 955 aa4.32□□□□□ -1.72
ZNF540-207ENST00000589285 PDZD8Q8NEN9 1154 aa4.32□□□□□ -1.72
ZNF540-207ENST00000589285 RCC1LQ96I51 464 aaKnown RBP4.32□□□□□ -1.72
ZNF540-207ENST00000589285 CWC22Q9HCG8 908 aaKnown RBP4.32□□□□□ -1.72
ZNF540-207ENST00000589285 PCDHA9Q9Y5H5 950 aa4.32□□□□□ -1.72
ZNF540-207ENST00000589285 PCDHA8Q9Y5H6 950 aa4.32□□□□□ -1.72
ZNF540-207ENST00000589285 RPGRIP1LQ68CZ1 1315 aa4.31□□□□□ -1.72
ZNF540-207ENST00000589285 EVC2Q86UK5 1308 aa4.31□□□□□ -1.72
ZNF540-207ENST00000589285 FGD2Q7Z6J4 655 aa4.31□□□□□ -1.72
ZNF540-207ENST00000589285 ATG4DQ86TL0 474 aaPredicted RBP4.31□□□□□ -1.72
ZNF540-207ENST00000589285 PANK1Q8TE04 598 aa4.31□□□□□ -1.72
ZNF540-207ENST00000589285 RNF114Q9Y508 228 aa4.31□□□□□ -1.72
ZNF540-207ENST00000589285 KNDC1Q76NI1 1749 aa4.31□□□□□ -1.72
ZNF540-207ENST00000589285 LRRC7Q96NW7 1537 aa4.31□□□□□ -1.72
ZNF540-207ENST00000589285 TMEM94Q12767 1356 aa4.31□□□□□ -1.72
ZNF540-207ENST00000589285 LTFP02788 710 aa4.31□□□□□ -1.72
ZNF540-207ENST00000589285 PABPC1P11940 636 aaKnown RBP4.31□□□□□ -1.72
ZNF540-207ENST00000589285 ZNF200P98182 395 aaPredicted RBP4.31□□□□□ -1.72
ZNF540-207ENST00000589285 ZNF460Q14592 562 aa4.31□□□□□ -1.72
ZNF540-207ENST00000589285 FSTL4Q6MZW2 842 aa4.31□□□□□ -1.72
ZNF540-207ENST00000589285 MORC1Q86VD1 984 aa4.31□□□□□ -1.72
ZNF540-207ENST00000589285 NPLOC4Q8TAT6 608 aa4.31□□□□□ -1.72
ZNF540-207ENST00000589285 ENOX1Q8TC92 643 aaKnown RBP4.31□□□□□ -1.72
ZNF540-207ENST00000589285 SH3TC2Q8TF17 1288 aa4.31□□□□□ -1.72
ZNF540-207ENST00000589285 SMARCC1Q92922 1105 aaPredicted RBP4.31□□□□□ -1.72
ZNF540-207ENST00000589285 PHF20Q9BVI0 1012 aa4.31□□□□□ -1.72
ZNF540-207ENST00000589285 SF3B6Q9Y3B4 125 aaKnown RBP4.31□□□□□ -1.72
ZNF540-207ENST00000589285 PTCH2Q9Y6C5 1203 aa4.31□□□□□ -1.72
ZNF540-207ENST00000589285 PIK3C2GO75747 1445 aa4.31□□□□□ -1.72
ZNF540-207ENST00000589285 PTPRUQ92729 1446 aa4.31□□□□□ -1.72
ZNF540-207ENST00000589285 A0A1W2PQ27 194 aa4.3□□□□□ -1.72
ZNF540-207ENST00000589285 A0A1W2PQ64 194 aa4.3□□□□□ -1.72
ZNF540-207ENST00000589285 A0A1W2PQC6 194 aa4.3□□□□□ -1.72
ZNF540-207ENST00000589285 A0A1W2PQD8 194 aa4.3□□□□□ -1.72
ZNF540-207ENST00000589285 ESYT3A0FGR9 886 aa4.3□□□□□ -1.72
ZNF540-207ENST00000589285 RASGRP1O95267 797 aa4.3□□□□□ -1.72
ZNF540-207ENST00000589285 SRGAP2CP0DJJ0 459 aa4.3□□□□□ -1.72
ZNF540-207ENST00000589285 SKOR2Q2VWA4 1001 aaPredicted RBP4.3□□□□□ -1.72
ZNF540-207ENST00000589285 EEF1DP3Q658K8 133 aa4.3□□□□□ -1.72
ZNF540-207ENST00000589285 NSMFQ6X4W1 530 aa4.3□□□□□ -1.72
ZNF540-207ENST00000589285 CDC6Q99741 560 aa4.3□□□□□ -1.72
ZNF540-207ENST00000589285 LMCD1Q9NZU5 365 aa4.3□□□□□ -1.72
ZNF540-207ENST00000589285 DIS3Q9Y2L1 958 aaKnown RBP4.3□□□□□ -1.72
ZNF540-207ENST00000589285 RRP7AQ9Y3A4 280 aaKnown RBP4.3□□□□□ -1.72
ZNF540-207ENST00000589285 SETBP1Q9Y6X0 1596 aa4.3□□□□□ -1.72
ZNF540-207ENST00000589285 ACEP12821 1306 aa4.3□□□□□ -1.72
ZNF540-207ENST00000589285 EIF3AQ14152 1382 aaKnown RBP4.3□□□□□ -1.72
ZNF540-207ENST00000589285 NEXMIFQ5QGS0 1516 aa4.3□□□□□ -1.72
ZNF540-207ENST00000589285 ITGB5P18084 799 aa4.3□□□□□ -1.72
ZNF540-207ENST00000589285 LIMS1P48059 325 aa4.3□□□□□ -1.72
ZNF540-207ENST00000589285 CYP4F8P98187 520 aa4.3□□□□□ -1.72
ZNF540-207ENST00000589285 CHRNA2Q15822 529 aa4.3□□□□□ -1.72
ZNF540-207ENST00000589285 FAM135BQ49AJ0 1406 aa4.3□□□□□ -1.72
ZNF540-207ENST00000589285 NLRX1Q86UT6 975 aa4.3□□□□□ -1.72
ZNF540-207ENST00000589285 NLGN1Q8N2Q7 840 aa4.3□□□□□ -1.72
ZNF540-207ENST00000589285 FAM26EQ8N5C1 309 aa4.3□□□□□ -1.72
ZNF540-207ENST00000589285 COQ6Q9Y2Z9 468 aa4.3□□□□□ -1.72
ZNF540-207ENST00000589285 TBX22Q9Y458 520 aa4.3□□□□□ -1.72
ZNF540-207ENST00000589285 TMEM131LA2VDJ0 1609 aa4.3□□□□□ -1.72
ZNF540-207ENST00000589285 EP400Q96L91 3159 aa4.3□□□□□ -1.72
ZNF540-207ENST00000589285 KAT6BQ8WYB5 2073 aa4.3□□□□□ -1.72
ZNF540-207ENST00000589285 ADAMTS13Q76LX8 1427 aa4.3□□□□□ -1.72
ZNF540-207ENST00000589285 HMOX1P09601 288 aa4.3□□□□□ -1.72
ZNF540-207ENST00000589285 TMEM67Q5HYA8 995 aa4.3□□□□□ -1.72
ZNF540-207ENST00000589285 INTS4Q96HW7 963 aaKnown RBP4.3□□□□□ -1.72
ZNF540-207ENST00000589285 CLUHP3Q96NS8 147 aa4.3□□□□□ -1.72
ZNF540-207ENST00000589285 SPATA9Q9BWV2 254 aa4.3□□□□□ -1.72
ZNF540-207ENST00000589285 PRKRIP1Q9H875 184 aaPredicted RBP4.3□□□□□ -1.72
ZNF540-207ENST00000589285 SLC52A2Q9HAB3 445 aa4.3□□□□□ -1.72
ZNF540-207ENST00000589285 NDOR1Q9UHB4 597 aa4.3□□□□□ -1.72
ZNF540-207ENST00000589285 RALGAPBQ86X10 1494 aa4.3□□□□□ -1.72
ZNF540-207ENST00000589285 C22orf46C9J442 243 aa4.29□□□□□ -1.72
ZNF540-207ENST00000589285 CAPNS1P04632 268 aa4.29□□□□□ -1.72
ZNF540-207ENST00000589285 C6orf222P0C671 652 aaPredicted RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms